RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 RILPL2Q969X0 211 aa17.2■□□□□ 0.34
PPP3CA-202ENST00000394853 BICDL1Q6ZP65 573 aa17.2■□□□□ 0.34
PPP3CA-202ENST00000394853 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
PPP3CA-202ENST00000394853 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
PPP3CA-202ENST00000394853 FRAT2O75474 233 aaPredicted RBP17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 DDX21Q9NR30 783 aaKnown RBP eCLIP17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 XIRP1Q702N8 1843 aaKnown RBP17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 KIF6Q6ZMV9 814 aa17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 PDIA6Q15084 440 aa17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 SEPT12Q8IYM1 358 aa17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 ZBTB3Q9H5J0 574 aa17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
PPP3CA-202ENST00000394853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.343e-6■■■□□ 18.5
PPP3CA-202ENST00000394853 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
PPP3CA-202ENST00000394853 MX1P20591 662 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 RXRBP28702 533 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 CPDO75976 1380 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 ZNF772Q68DY9 489 aaPredicted RBP17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 HSCBQ8IWL3 235 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 MYD88Q99836 296 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 KDM3BQ7LBC6 1761 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
PPP3CA-202ENST00000394853 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
PPP3CA-202ENST00000394853 SPATA31A6Q5VVP1 1343 aa17.16■□□□□ 0.34
PPP3CA-202ENST00000394853 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
PPP3CA-202ENST00000394853 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
PPP3CA-202ENST00000394853 PHF14O94880 888 aa17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 RBM25P49756 843 aaKnown RBP17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 KCNQ4P56696 695 aa17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 GJD4Q96KN9 370 aaPredicted RBP17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 ASAP1Q9ULH1 1129 aa17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 ATP5J2-PTCD1G3V325 749 aa17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 COL18A1P39060 1754 aa17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 CACNA1FO60840 1977 aa17.15■□□□□ 0.34
PPP3CA-202ENST00000394853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
PPP3CA-202ENST00000394853 RHPN1Q8TCX5 695 aa17.14■□□□□ 0.33
PPP3CA-202ENST00000394853 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
PPP3CA-202ENST00000394853 SIL1Q9H173 461 aa17.14■□□□□ 0.33
PPP3CA-202ENST00000394853 A1BGP04217 495 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 SUCLG2Q96I99 432 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 KIF2CQ99661 725 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 GRM8O00222 908 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 IGKV5-2P06315 115 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 GPTP24298 496 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 CCDC85AQ96PX6 553 aaPredicted RBP17.13■□□□□ 0.33
PPP3CA-202ENST00000394853 OVOS2A0A0G2JMS6 1433 aa17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 DNAJC10Q8IXB1 793 aa17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 BICC1Q9H694 974 aaKnown RBP17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 TBC1D2BQ9UPU7 963 aa17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 TRIM37O94972 964 aa17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 BBXQ8WY36 941 aaPredicted RBP17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
PPP3CA-202ENST00000394853 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
PPP3CA-202ENST00000394853 IGSF3O75054 1194 aa17.11■□□□□ 0.33
PPP3CA-202ENST00000394853 ALDH1L1O75891 902 aa17.11■□□□□ 0.33
PPP3CA-202ENST00000394853 POLA2Q14181 598 aa17.11■□□□□ 0.33
PPP3CA-202ENST00000394853 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
PPP3CA-202ENST00000394853 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
PPP3CA-202ENST00000394853 PPP1R1BQ9UD71 204 aaPredicted RBP17.11■□□□□ 0.33
PPP3CA-202ENST00000394853 KRT27Q7Z3Y8 459 aa17.1■□□□□ 0.33
PPP3CA-202ENST00000394853 KIF1BPQ96EK5 621 aa17.1■□□□□ 0.33
PPP3CA-202ENST00000394853 AK7Q96M32 723 aa17.1■□□□□ 0.33
PPP3CA-202ENST00000394853 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
PPP3CA-202ENST00000394853 ZPR1O75312 459 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 APBA3O96018 575 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 OSBPL3Q9H4L5 887 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 THRAP3Q9Y2W1 955 aaKnown RBP17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 PIGBQ92521 554 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 KAZALD1Q96I82 304 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 ANTXR1Q9H6X2 564 aa17.09■□□□□ 0.33
PPP3CA-202ENST00000394853 KCNQ2O43526 872 aa17.08■□□□□ 0.33
PPP3CA-202ENST00000394853 UBE3BQ7Z3V4 1068 aa17.08■□□□□ 0.33
PPP3CA-202ENST00000394853 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.33
PPP3CA-202ENST00000394853 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.33
PPP3CA-202ENST00000394853 GORABQ5T7V8 394 aa17.08■□□□□ 0.32
PPP3CA-202ENST00000394853 ERC2O15083 957 aa17.08■□□□□ 0.32
PPP3CA-202ENST00000394853 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
PPP3CA-202ENST00000394853 VPS72Q15906 364 aa17.08■□□□□ 0.32
PPP3CA-202ENST00000394853 EPHA10Q5JZY3 1008 aa17.08■□□□□ 0.32
PPP3CA-202ENST00000394853 ANO2Q9NQ90 1003 aa17.08■□□□□ 0.32
PPP3CA-202ENST00000394853 GCKRQ14397 625 aa17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 TTLL7Q6ZT98 887 aa17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 ZNF526Q8TF50 670 aaPredicted RBP17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 NBPF26B4DH59 902 aa17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 NBPF14Q5TI25 921 aa17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 NBPF10Q6P3W6 841 aaKnown RBP17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 NBPF15Q8N660 670 aa17.07■□□□□ 0.32
PPP3CA-202ENST00000394853 SPATA31A1Q5TZJ5 1347 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms