RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 TMX3Q96JJ7 454 aa18.84■□□□□ 0.61
PTBP1-204ENST00000394601 VGLL3A8MV65 326 aa18.84■□□□□ 0.61
PTBP1-204ENST00000394601 AMOTQ4VCS5 1084 aa18.83■□□□□ 0.6
PTBP1-204ENST00000394601 PLEKHO1Q53GL0 409 aaPredicted RBP18.83■□□□□ 0.6
PTBP1-204ENST00000394601 C17orf53Q8N3J3 647 aaPredicted RBP18.83■□□□□ 0.6
PTBP1-204ENST00000394601 SRGAP3O43295 1099 aa18.82■□□□□ 0.6
PTBP1-204ENST00000394601 ANKRD24Q8TF21 1146 aa18.82■□□□□ 0.6
PTBP1-204ENST00000394601 RILPL2Q969X0 211 aa18.82■□□□□ 0.6
PTBP1-204ENST00000394601 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
PTBP1-204ENST00000394601 PRIM1P49642 420 aaKnown RBP18.82■□□□□ 0.6
PTBP1-204ENST00000394601 NEK4P51957 841 aa18.82■□□□□ 0.6
PTBP1-204ENST00000394601 RBSNQ9H1K0 784 aa18.82■□□□□ 0.6
PTBP1-204ENST00000394601 C1orf167Q5SNV9 1468 aa18.82■□□□□ 0.6
PTBP1-204ENST00000394601 SURF6O75683 361 aaKnown RBP18.81■□□□□ 0.6
PTBP1-204ENST00000394601 PDIA6Q15084 440 aa18.81■□□□□ 0.6
PTBP1-204ENST00000394601 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
PTBP1-204ENST00000394601 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
PTBP1-204ENST00000394601 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
PTBP1-204ENST00000394601 HSPA4P34932 840 aa18.81■□□□□ 0.6
PTBP1-204ENST00000394601 FGD1P98174 961 aa18.81■□□□□ 0.6
PTBP1-204ENST00000394601 KAZALD1Q96I82 304 aa18.81■□□□□ 0.6
PTBP1-204ENST00000394601 SYCE3A1L190 88 aa18.8■□□□□ 0.6
PTBP1-204ENST00000394601 GPT2Q8TD30 523 aa18.8■□□□□ 0.6
PTBP1-204ENST00000394601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.8■□□□□ 0.6
PTBP1-204ENST00000394601 PDE4CQ08493 712 aa18.79■□□□□ 0.6
PTBP1-204ENST00000394601 KIF1BPQ96EK5 621 aa18.79■□□□□ 0.6
PTBP1-204ENST00000394601 DBF4Q9UBU7 674 aaPredicted RBP18.79■□□□□ 0.6
PTBP1-204ENST00000394601 UTYO14607 1347 aa18.79■□□□□ 0.6
PTBP1-204ENST00000394601 KDM6AO15550 1401 aaPredicted RBP18.79■□□□□ 0.6
PTBP1-204ENST00000394601 GLI3P10071 1580 aa18.79■□□□□ 0.6
PTBP1-204ENST00000394601 TEFQ10587 303 aa18.79■□□□□ 0.6
PTBP1-204ENST00000394601 SGSM2O43147 1006 aa18.79■□□□□ 0.6
PTBP1-204ENST00000394601 LSG1Q9H089 658 aaKnown RBP18.79■□□□□ 0.6
PTBP1-204ENST00000394601 ANO2Q9NQ90 1003 aa18.79■□□□□ 0.6
PTBP1-204ENST00000394601 MAP4K4O95819 1239 aaPredicted RBP18.78■□□□□ 0.6
PTBP1-204ENST00000394601 PLCD3Q8N3E9 789 aa18.78■□□□□ 0.6
PTBP1-204ENST00000394601 ERBB3P21860 1342 aa18.78■□□□□ 0.6
PTBP1-204ENST00000394601 MAP3K2Q9Y2U5 619 aa18.78■□□□□ 0.6
PTBP1-204ENST00000394601 BRD1O95696 1058 aa18.77■□□□□ 0.6
PTBP1-204ENST00000394601 ZNF445P59923 1031 aa18.77■□□□□ 0.6
PTBP1-204ENST00000394601 RAD50Q92878 1312 aa18.77■□□□□ 0.6
PTBP1-204ENST00000394601 ABCC6O95255 1503 aa18.77■□□□□ 0.6
PTBP1-204ENST00000394601 KSR2Q6VAB6 950 aa18.77■□□□□ 0.59
PTBP1-204ENST00000394601 INTS4Q96HW7 963 aaKnown RBP18.77■□□□□ 0.59
PTBP1-204ENST00000394601 MCM2P49736 904 aa18.76■□□□□ 0.59
PTBP1-204ENST00000394601 TTC14Q96N46 770 aa18.76■□□□□ 0.59
PTBP1-204ENST00000394601 NSFL1CQ9UNZ2 370 aaKnown RBP18.76■□□□□ 0.59
PTBP1-204ENST00000394601 ALDH1L1O75891 902 aa18.75■□□□□ 0.59
PTBP1-204ENST00000394601 CWF19L2Q2TBE0 894 aaKnown RBP18.75■□□□□ 0.59
PTBP1-204ENST00000394601 ZSCAN23Q3MJ62 389 aa18.75■□□□□ 0.59
PTBP1-204ENST00000394601 KRT28Q7Z3Y7 464 aa18.75■□□□□ 0.59
PTBP1-204ENST00000394601 LRP10Q7Z4F1 713 aa18.75■□□□□ 0.59
PTBP1-204ENST00000394601 MRC1P22897 1456 aa18.75■□□□□ 0.59
PTBP1-204ENST00000394601 ZBTB22O15209 634 aa18.75■□□□□ 0.59
PTBP1-204ENST00000394601 RASEFQ8IZ41 740 aa18.74■□□□□ 0.59
PTBP1-204ENST00000394601 MEGF6O75095 1541 aa18.74■□□□□ 0.59
PTBP1-204ENST00000394601 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
PTBP1-204ENST00000394601 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
PTBP1-204ENST00000394601 C1orf141Q5JVX7 400 aa18.74■□□□□ 0.59
PTBP1-204ENST00000394601 UPF3BQ9BZI7 483 aaKnown RBP18.74■□□□□ 0.59
PTBP1-204ENST00000394601 SNX14Q9Y5W7 946 aa18.73■□□□□ 0.59
PTBP1-204ENST00000394601 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
PTBP1-204ENST00000394601 PA2G4Q9UQ80 394 aaKnown RBP18.73■□□□□ 0.59
PTBP1-204ENST00000394601 TCHHQ07283 1943 aa18.72■□□□□ 0.59
PTBP1-204ENST00000394601 IGKV5-2P06315 115 aa18.72■□□□□ 0.59
PTBP1-204ENST00000394601 MAP7D2Q96T17 732 aa18.72■□□□□ 0.59
PTBP1-204ENST00000394601 RPAP1Q9BWH6 1393 aaPredicted RBP18.72■□□□□ 0.59
PTBP1-204ENST00000394601 MCCP23508 829 aa18.72■□□□□ 0.59
PTBP1-204ENST00000394601 PPP4R3BQ5MIZ7 849 aa18.72■□□□□ 0.59
PTBP1-204ENST00000394601 SUCLG2Q96I99 432 aa18.72■□□□□ 0.59
PTBP1-204ENST00000394601 SASH1O94885 1247 aa18.71■□□□□ 0.59
PTBP1-204ENST00000394601 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
PTBP1-204ENST00000394601 HYPKQ9NX55 129 aa18.71■□□□□ 0.59
PTBP1-204ENST00000394601 KCNB2Q92953 911 aa18.71■□□□□ 0.58
PTBP1-204ENST00000394601 DDX21Q9NR30 783 aaKnown RBP eCLIP18.71■□□□□ 0.58
PTBP1-204ENST00000394601 GDPD2Q9HCC8 539 aa18.7■□□□□ 0.58
PTBP1-204ENST00000394601 TMEM63CQ9P1W3 806 aa18.7■□□□□ 0.58
PTBP1-204ENST00000394601 CGNQ9P2M7 1197 aaKnown RBP18.7■□□□□ 0.58
PTBP1-204ENST00000394601 DTNBO60941 627 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 HSP90AB4PQ58FF6 505 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 LINS1Q8NG48 757 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 CNTROBQ8N137 903 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 NPHP3Q7Z494 1330 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 GRM8O00222 908 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 BICC1Q9H694 974 aaKnown RBP18.69■□□□□ 0.58
PTBP1-204ENST00000394601 C19orf44Q9H6X5 657 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 SLC52A2Q9HAB3 445 aa18.69■□□□□ 0.58
PTBP1-204ENST00000394601 ARFGEF2Q9Y6D5 1785 aa18.68■□□□□ 0.58
PTBP1-204ENST00000394601 GLRX3O76003 335 aaKnown RBP18.68■□□□□ 0.58
PTBP1-204ENST00000394601 PTH1RQ03431 593 aa18.68■□□□□ 0.58
PTBP1-204ENST00000394601 SLC39A6Q13433 755 aa18.68■□□□□ 0.58
PTBP1-204ENST00000394601 RUFY3Q7L099 469 aa18.68■□□□□ 0.58
PTBP1-204ENST00000394601 TTC12Q9H892 705 aaPredicted RBP18.68■□□□□ 0.58
PTBP1-204ENST00000394601 NOL7Q9UMY1 257 aaKnown RBP18.68■□□□□ 0.58
PTBP1-204ENST00000394601 ZKSCAN5Q9Y2L8 839 aa18.68■□□□□ 0.58
PTBP1-204ENST00000394601 PHKG2P15735 406 aa18.67■□□□□ 0.58
PTBP1-204ENST00000394601 CWC27Q6UX04 472 aaKnown RBP18.67■□□□□ 0.58
PTBP1-204ENST00000394601 SMAP1Q8IYB5 467 aaPredicted RBP18.67■□□□□ 0.58
PTBP1-204ENST00000394601 DDX17Q92841 729 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms