RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 HOOK1Q9UJC3 728 aaKnown RBP12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 SHROOM2Q13796 1616 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 MCM4P33991 863 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 RFC4P35249 363 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 RBM5P52756 815 aaKnown RBP eCLIP12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 SMARCC1Q92922 1105 aaPredicted RBP12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 MINDY4BA8MYZ0 360 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
MTHFD2-201ENST00000394053 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 NAPBQ9H115 298 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 ABCA9Q8IUA7 1624 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 NPHP4O75161 1426 aaPredicted RBP12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 STK38Q15208 465 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 SLC52A2Q9HAB3 445 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 HOXB7P09629 217 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 RNF123Q5XPI4 1314 aa12.61□□□□□ -0.39
MTHFD2-201ENST00000394053 A2ML1A8K2U0 1454 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 KRT85P78386 507 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 FERMT3Q86UX7 667 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 USP19O94966 1318 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 LRRIQ1Q96JM4 1722 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 KINO60870 393 aaKnown RBP12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 C8orf34Q49A92 452 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 FAM135BQ49AJ0 1406 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 AATKQ6ZMQ8 1374 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 A1BGP04217 495 aa12.6□□□□□ -0.39
MTHFD2-201ENST00000394053 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 ZNF396Q96N95 335 aaPredicted RBP12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 UNC13BO14795 1591 aa12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 USP6P35125 1406 aa12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 MRE11P49959 708 aa12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 ZSCAN29Q8IWY8 852 aaPredicted RBP12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 RNF17Q9BXT8 1623 aaKnown RBP12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 KCNQ3O43525 872 aa12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 CCDC47Q96A33 483 aaKnown RBP12.59□□□□□ -0.39
MTHFD2-201ENST00000394053 ZNF213O14771 459 aa12.58□□□□□ -0.39
MTHFD2-201ENST00000394053 NASPP49321 788 aaPredicted RBP12.58□□□□□ -0.39
MTHFD2-201ENST00000394053 ATP2B3Q16720 1220 aa12.58□□□□□ -0.39
MTHFD2-201ENST00000394053 CCDC152Q4G0S7 254 aa12.58□□□□□ -0.39
MTHFD2-201ENST00000394053 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.39
MTHFD2-201ENST00000394053 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.39
MTHFD2-201ENST00000394053 TCEAL9Q9UHQ7 104 aa12.58□□□□□ -0.39
MTHFD2-201ENST00000394053 ATP7BP35670 1465 aa12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 ME1P48163 572 aa12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 SETDB2Q96T68 719 aa12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 BICC1Q9H694 974 aaKnown RBP12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 LIMCH1Q9UPQ0 1083 aa12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 SYNMO15061 1565 aa12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 C6orf229H3BNL8 230 aa12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 DZIP1Q86YF9 867 aaKnown RBP12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 BCL11BQ9C0K0 894 aaPredicted RBP12.58□□□□□ -0.4
MTHFD2-201ENST00000394053 NBPF7P0C2Y1 421 aaPredicted RBP12.57□□□□□ -0.4
MTHFD2-201ENST00000394053 FAM89AQ96GI7 184 aa12.57□□□□□ -0.4
MTHFD2-201ENST00000394053 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
MTHFD2-201ENST00000394053 CDKL5O76039 1030 aa12.57□□□□□ -0.4
MTHFD2-201ENST00000394053 HAND2P61296 217 aa12.57□□□□□ -0.4
MTHFD2-201ENST00000394053 NLRP3Q96P20 1036 aa12.57□□□□□ -0.4
MTHFD2-201ENST00000394053 IQSEC3Q9UPP2 1182 aaPredicted RBP12.57□□□□□ -0.4
MTHFD2-201ENST00000394053 USP5P45974 858 aa12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 ESYT1Q9BSJ8 1104 aa12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 PIBF1Q8WXW3 757 aa12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 SEC24BO95487 1268 aa12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 DNAJC10Q8IXB1 793 aa12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 JMYQ8N9B5 988 aa12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 HELBQ8NG08 1087 aaPredicted RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 OTUD7AQ8TE49 926 aaPredicted RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 METTL22Q9BUU2 404 aaPredicted RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 SH2B1Q9NRF2 756 aaPredicted RBP12.56□□□□□ -0.4
MTHFD2-201ENST00000394053 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 TPM3P06753 285 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 TRMT2AQ8IZ69 625 aaKnown RBP12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 CCDC82Q8N4S0 544 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 UTP14AQ9BVJ6 771 aaKnown RBP12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 KIAA0232Q92628 1395 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 CROCC2H7BZ55 1655 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 TPM1P09493 284 aa12.55□□□□□ -0.4
MTHFD2-201ENST00000394053 PHKG2P15735 406 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms