RNA–Protein interactions for RNA: ENST00000393240.7

SYT1-202, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-202ENST00000393240 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.49
SYT1-202ENST00000393240 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
SYT1-202ENST00000393240 EXOC6BQ9Y2D4 811 aa12.01□□□□□ -0.49
SYT1-202ENST00000393240 HSP90AB4PQ58FF6 505 aa12.01□□□□□ -0.49
SYT1-202ENST00000393240 C16orf71Q8IYS4 520 aaPredicted RBP12.01□□□□□ -0.49
SYT1-202ENST00000393240 OSBPL3Q9H4L5 887 aa12.01□□□□□ -0.49
SYT1-202ENST00000393240 SEC24BO95487 1268 aa12□□□□□ -0.49
SYT1-202ENST00000393240 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
SYT1-202ENST00000393240 COL15A1P39059 1388 aa12□□□□□ -0.49
SYT1-202ENST00000393240 SMARCA5O60264 1052 aaPredicted RBP12□□□□□ -0.49
SYT1-202ENST00000393240 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
SYT1-202ENST00000393240 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
SYT1-202ENST00000393240 RBM42Q9BTD8 480 aaKnown RBP12□□□□□ -0.49
SYT1-202ENST00000393240 UPF2Q9HAU5 1272 aaKnown RBP12□□□□□ -0.49
SYT1-202ENST00000393240 ITGB4P16144 1822 aa12□□□□□ -0.49
SYT1-202ENST00000393240 APBB1O00213 710 aa11.99□□□□□ -0.49
SYT1-202ENST00000393240 TTC22Q5TAA0 569 aa11.99□□□□□ -0.49
SYT1-202ENST00000393240 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
SYT1-202ENST00000393240 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
SYT1-202ENST00000393240 SUCLG2Q96I99 432 aa11.99□□□□□ -0.49
SYT1-202ENST00000393240 SURF6O75683 361 aaKnown RBP11.99□□□□□ -0.49
SYT1-202ENST00000393240 USP21Q9UK80 565 aa11.99□□□□□ -0.49
SYT1-202ENST00000393240 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
SYT1-202ENST00000393240 DDRGK1Q96HY6 314 aa11.98□□□□□ -0.49
SYT1-202ENST00000393240 SLC4A9Q96Q91 983 aa11.98□□□□□ -0.49
SYT1-202ENST00000393240 SALL3Q9BXA9 1300 aa11.98□□□□□ -0.49
SYT1-202ENST00000393240 EIF5BO60841 1220 aaKnown RBP11.98□□□□□ -0.49
SYT1-202ENST00000393240 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
SYT1-202ENST00000393240 KIF1BPQ96EK5 621 aa11.98□□□□□ -0.49
SYT1-202ENST00000393240 GSPT1P15170 499 aaKnown RBP11.97□□□□□ -0.49
SYT1-202ENST00000393240 HSPA1LP34931 641 aa11.97□□□□□ -0.49
SYT1-202ENST00000393240 OTUD7AQ8TE49 926 aaPredicted RBP11.97□□□□□ -0.49
SYT1-202ENST00000393240 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
SYT1-202ENST00000393240 MSH5O43196 834 aa11.97□□□□□ -0.49
SYT1-202ENST00000393240 PDE1AP54750 535 aa11.97□□□□□ -0.49
SYT1-202ENST00000393240 CCDC191Q8NCU4 936 aa11.97□□□□□ -0.49
SYT1-202ENST00000393240 STAP2Q9UGK3 403 aa11.97□□□□□ -0.49
SYT1-202ENST00000393240 RHPN1Q8TCX5 695 aa11.97□□□□□ -0.49
SYT1-202ENST00000393240 ARFGEF2Q9Y6D5 1785 aa11.96□□□□□ -0.49
SYT1-202ENST00000393240 A0A087WZG4 1122 aa11.96□□□□□ -0.49
SYT1-202ENST00000393240 H7C1W4 665 aa11.96□□□□□ -0.49
SYT1-202ENST00000393240 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
SYT1-202ENST00000393240 CWC25Q9NXE8 425 aaPredicted RBP11.96□□□□□ -0.49
SYT1-202ENST00000393240 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.49
SYT1-202ENST00000393240 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.96□□□□□ -0.5
SYT1-202ENST00000393240 ATP5J2-PTCD1G3V325 749 aa11.96□□□□□ -0.5
SYT1-202ENST00000393240 CASP7P55210 303 aa11.96□□□□□ -0.5
SYT1-202ENST00000393240 KIF6Q6ZMV9 814 aa11.96□□□□□ -0.5
SYT1-202ENST00000393240 ERC1Q8IUD2 1116 aa11.96□□□□□ -0.5
SYT1-202ENST00000393240 SMARCC1Q92922 1105 aaPredicted RBP11.96□□□□□ -0.5
SYT1-202ENST00000393240 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.5
SYT1-202ENST00000393240 CDC45O75419 566 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 RABL6Q3YEC7 729 aaPredicted RBP11.95□□□□□ -0.5
SYT1-202ENST00000393240 ACSBG1Q96GR2 724 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 AOX1Q06278 1338 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 MX1P20591 662 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 ISCA1Q9BUE6 129 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 ZBTB3Q9H5J0 574 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 IL6STP40189 918 aaPredicted RBP11.95□□□□□ -0.5
SYT1-202ENST00000393240 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
SYT1-202ENST00000393240 UBE3BQ7Z3V4 1068 aa11.95□□□□□ -0.5
SYT1-202ENST00000393240 TBC1D9Q6ZT07 1266 aa11.94□□□□□ -0.5
SYT1-202ENST00000393240 NUP188Q5SRE5 1749 aa11.94□□□□□ -0.5
SYT1-202ENST00000393240 MAP3K15Q6ZN16 1313 aa11.94□□□□□ -0.5
SYT1-202ENST00000393240 EPHA10Q5JZY3 1008 aa11.94□□□□□ -0.5
SYT1-202ENST00000393240 SDSP20132 328 aa11.93□□□□□ -0.5
SYT1-202ENST00000393240 LOC102724428A0A0B4J2F2 783 aa11.93□□□□□ -0.5
SYT1-202ENST00000393240 SIK1P57059 783 aa11.93□□□□□ -0.5
SYT1-202ENST00000393240 OS9Q13438 667 aaPredicted RBP11.93□□□□□ -0.5
SYT1-202ENST00000393240 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
SYT1-202ENST00000393240 GIGYF2Q6Y7W6 1299 aaKnown RBP11.93□□□□□ -0.5
SYT1-202ENST00000393240 GJD4Q96KN9 370 aaPredicted RBP11.93□□□□□ -0.5
SYT1-202ENST00000393240 ERVV-1B6SEH8 477 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
SYT1-202ENST00000393240 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 MFAP1P55081 439 aaKnown RBP11.92□□□□□ -0.5
SYT1-202ENST00000393240 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.5
SYT1-202ENST00000393240 C22orf23Q9BZE7 217 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 COPRSQ9NQ92 184 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 PALLDQ8WX93 1383 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 TJP1Q07157 1748 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
SYT1-202ENST00000393240 CICQ96RK0 1608 aaPredicted RBP11.92□□□□□ -0.5
SYT1-202ENST00000393240 FOXO4P98177 505 aa11.92□□□□□ -0.5
SYT1-202ENST00000393240 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
SYT1-202ENST00000393240 PA2G4Q9UQ80 394 aaKnown RBP11.92□□□□□ -0.5
SYT1-202ENST00000393240 KCNQ2O43526 872 aa11.91□□□□□ -0.5
SYT1-202ENST00000393240 RFX5P48382 616 aaPredicted RBP11.91□□□□□ -0.5
SYT1-202ENST00000393240 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
SYT1-202ENST00000393240 CASC1Q6TDU7 716 aa11.91□□□□□ -0.5
SYT1-202ENST00000393240 ZNF330Q9Y3S2 320 aaPredicted RBP11.91□□□□□ -0.5
SYT1-202ENST00000393240 THSD7AQ9UPZ6 1657 aa11.91□□□□□ -0.5
SYT1-202ENST00000393240 AFF2P51816 1311 aa11.91□□□□□ -0.5
SYT1-202ENST00000393240 CCDC87Q9NVE4 849 aa11.91□□□□□ -0.5
SYT1-202ENST00000393240 TRPC5Q9UL62 973 aaPredicted RBP11.91□□□□□ -0.5
SYT1-202ENST00000393240 TTC41PQ6P2S7 1318 aa11.91□□□□□ -0.5
SYT1-202ENST00000393240 A0A0G2JS52 829 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms