RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
USP44-202ENST00000393091 ANKRD31Q8N7Z5 1873 aa16.98■□□□□ 0.31
USP44-202ENST00000393091 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
USP44-202ENST00000393091 KCNQ4P56696 695 aa16.97■□□□□ 0.31
USP44-202ENST00000393091 GIGYF2Q6Y7W6 1299 aaKnown RBP16.97■□□□□ 0.31
USP44-202ENST00000393091 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
USP44-202ENST00000393091 ZNF34Q8IZ26 560 aa16.97■□□□□ 0.31
USP44-202ENST00000393091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.96■□□□□ 0.31
USP44-202ENST00000393091 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
USP44-202ENST00000393091 TM4SF1P30408 202 aa16.96■□□□□ 0.31
USP44-202ENST00000393091 HSP90AB3PQ58FF7 597 aa16.96■□□□□ 0.31
USP44-202ENST00000393091 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.31
USP44-202ENST00000393091 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
USP44-202ENST00000393091 UTYO14607 1347 aa16.96■□□□□ 0.3
USP44-202ENST00000393091 BRCA1P38398 1863 aaKnown RBP16.96■□□□□ 0.3
USP44-202ENST00000393091 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
USP44-202ENST00000393091 DZIP3Q86Y13 1208 aaKnown RBP16.95■□□□□ 0.3
USP44-202ENST00000393091 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
USP44-202ENST00000393091 METTL22Q9BUU2 404 aaPredicted RBP16.95■□□□□ 0.3
USP44-202ENST00000393091 API5Q9BZZ5 524 aaKnown RBP16.95■□□□□ 0.3
USP44-202ENST00000393091 PHAXQ9H814 394 aaKnown RBP16.95■□□□□ 0.3
USP44-202ENST00000393091 IPO8O15397 1037 aaKnown RBP16.95■□□□□ 0.3
USP44-202ENST00000393091 GYS1P13807 737 aa16.95■□□□□ 0.3
USP44-202ENST00000393091 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
USP44-202ENST00000393091 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
USP44-202ENST00000393091 G2E3Q7L622 706 aa16.95■□□□□ 0.3
USP44-202ENST00000393091 CANXP27824 592 aaKnown RBP16.94■□□□□ 0.3
USP44-202ENST00000393091 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
USP44-202ENST00000393091 TFCP2L1Q9NZI6 479 aa16.94■□□□□ 0.3
USP44-202ENST00000393091 INTS3Q68E01 1043 aaKnown RBP16.94■□□□□ 0.3
USP44-202ENST00000393091 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
USP44-202ENST00000393091 TTLL7Q6ZT98 887 aa16.93■□□□□ 0.3
USP44-202ENST00000393091 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
USP44-202ENST00000393091 MS4A1P11836 297 aa16.93■□□□□ 0.3
USP44-202ENST00000393091 TCIRG1Q13488 830 aa16.93■□□□□ 0.3
USP44-202ENST00000393091 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
USP44-202ENST00000393091 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
USP44-202ENST00000393091 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
USP44-202ENST00000393091 NLGN1Q8N2Q7 840 aa16.92■□□□□ 0.3
USP44-202ENST00000393091 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
USP44-202ENST00000393091 ATF7IPQ6VMQ6 1270 aa16.92■□□□□ 0.3
USP44-202ENST00000393091 MYL6BP14649 208 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 RFC4P35249 363 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 BEND3Q5T5X7 828 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
USP44-202ENST00000393091 CARMIL3Q8ND23 1372 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 BCAR3O75815 825 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
USP44-202ENST00000393091 LRRC37AA6NMS7 1700 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 DNAAF4Q8WXU2 420 aa16.91■□□□□ 0.3
USP44-202ENST00000393091 C10orf71Q711Q0 1435 aa16.9■□□□□ 0.3
USP44-202ENST00000393091 ZPR1O75312 459 aa16.9■□□□□ 0.3
USP44-202ENST00000393091 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
USP44-202ENST00000393091 LINS1Q8NG48 757 aa16.9■□□□□ 0.3
USP44-202ENST00000393091 MTFR1LQ9H019 292 aa16.9■□□□□ 0.3
USP44-202ENST00000393091 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
USP44-202ENST00000393091 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
USP44-202ENST00000393091 TRIM27P14373 513 aa16.89■□□□□ 0.29
USP44-202ENST00000393091 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
USP44-202ENST00000393091 HLFQ16534 295 aa16.89■□□□□ 0.29
USP44-202ENST00000393091 USPL1Q5W0Q7 1092 aa16.89■□□□□ 0.29
USP44-202ENST00000393091 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
USP44-202ENST00000393091 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
USP44-202ENST00000393091 MAP3K2Q9Y2U5 619 aa16.88■□□□□ 0.29
USP44-202ENST00000393091 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
USP44-202ENST00000393091 ANXA1P04083 346 aa16.88■□□□□ 0.29
USP44-202ENST00000393091 SLC10A5Q5PT55 438 aa16.88■□□□□ 0.29
USP44-202ENST00000393091 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
USP44-202ENST00000393091 NECTIN2Q92692 538 aa16.88■□□□□ 0.29
USP44-202ENST00000393091 IGKV5-2P06315 115 aa16.87■□□□□ 0.29
USP44-202ENST00000393091 PLA2G12BQ9BX93 195 aa16.87■□□□□ 0.29
USP44-202ENST00000393091 UBN2Q6ZU65 1347 aa16.87■□□□□ 0.29
USP44-202ENST00000393091 KLRG2A4D1S0 409 aaPredicted RBP16.87■□□□□ 0.29
USP44-202ENST00000393091 POLRMTO00411 1230 aaKnown RBP16.87■□□□□ 0.29
USP44-202ENST00000393091 RRP1P56182 461 aaKnown RBP16.87■□□□□ 0.29
USP44-202ENST00000393091 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
USP44-202ENST00000393091 CASP7P55210 303 aa16.87■□□□□ 0.29
USP44-202ENST00000393091 AAMPQ13685 434 aa16.87■□□□□ 0.29
USP44-202ENST00000393091 NEURL1BA8MQ27 555 aa16.86■□□□□ 0.29
USP44-202ENST00000393091 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
USP44-202ENST00000393091 SRP68Q9UHB9 627 aaKnown RBP16.86■□□□□ 0.29
USP44-202ENST00000393091 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
USP44-202ENST00000393091 TBC1D2BQ9UPU7 963 aa16.86■□□□□ 0.29
USP44-202ENST00000393091 H7C1W4 665 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 FKBP8Q14318 412 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 ARFGEF1Q9Y6D6 1849 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 NTSR2O95665 410 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
USP44-202ENST00000393091 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
USP44-202ENST00000393091 PTGER2P43116 358 aa16.84■□□□□ 0.29
USP44-202ENST00000393091 NFIXQ14938 502 aa16.84■□□□□ 0.29
USP44-202ENST00000393091 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
USP44-202ENST00000393091 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
USP44-202ENST00000393091 PHF14O94880 888 aa16.83■□□□□ 0.28
USP44-202ENST00000393091 NEXNQ0ZGT2 675 aa16.83■□□□□ 0.28
USP44-202ENST00000393091 GCKRQ14397 625 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms