RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
SC5D-202ENST00000392789 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
SC5D-202ENST00000392789 ZNF790Q6PG37 636 aa17.7■□□□□ 0.42
SC5D-202ENST00000392789 C5P01031 1676 aa17.7■□□□□ 0.42
SC5D-202ENST00000392789 KDM6AO15550 1401 aaPredicted RBP17.7■□□□□ 0.42
SC5D-202ENST00000392789 IFIT2P09913 472 aaKnown RBP17.7■□□□□ 0.42
SC5D-202ENST00000392789 RUFY2Q8WXA3 655 aa17.7■□□□□ 0.42
SC5D-202ENST00000392789 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
SC5D-202ENST00000392789 TATP17735 454 aaPredicted RBP17.69■□□□□ 0.42
SC5D-202ENST00000392789 PDIA6Q15084 440 aa17.69■□□□□ 0.42
SC5D-202ENST00000392789 ZSCAN23Q3MJ62 389 aa17.69■□□□□ 0.42
SC5D-202ENST00000392789 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
SC5D-202ENST00000392789 DIAPH3Q9NSV4 1193 aa17.69■□□□□ 0.42
SC5D-202ENST00000392789 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
SC5D-202ENST00000392789 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
SC5D-202ENST00000392789 SNX14Q9Y5W7 946 aa17.69■□□□□ 0.42
SC5D-202ENST00000392789 SUCLG2Q96I99 432 aa17.69■□□□□ 0.42
SC5D-202ENST00000392789 PA2G4Q9UQ80 394 aaKnown RBP17.69■□□□□ 0.42
SC5D-202ENST00000392789 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
SC5D-202ENST00000392789 NASPP49321 788 aaPredicted RBP17.68■□□□□ 0.42
SC5D-202ENST00000392789 AIMP1Q12904 312 aaKnown RBP17.68■□□□□ 0.42
SC5D-202ENST00000392789 UBE2Q2Q8WVN8 375 aa17.68■□□□□ 0.42
SC5D-202ENST00000392789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.42
SC5D-202ENST00000392789 PHKG2P15735 406 aa17.68■□□□□ 0.42
SC5D-202ENST00000392789 ATF3P18847 181 aa17.68■□□□□ 0.42
SC5D-202ENST00000392789 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
SC5D-202ENST00000392789 GPT2Q8TD30 523 aa17.68■□□□□ 0.42
SC5D-202ENST00000392789 COL18A1P39060 1754 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 DCCP43146 1447 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 TRIM44Q96DX7 344 aaPredicted RBP17.67■□□□□ 0.42
SC5D-202ENST00000392789 BICC1Q9H694 974 aaKnown RBP17.67■□□□□ 0.42
SC5D-202ENST00000392789 MBD3O95983 291 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 CCDC173Q0VFZ6 552 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 FOXD4L5Q5VV16 416 aaPredicted RBP17.67■□□□□ 0.42
SC5D-202ENST00000392789 AACSQ86V21 672 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 FOXD4L4Q8WXT5 416 aaPredicted RBP17.67■□□□□ 0.42
SC5D-202ENST00000392789 ANP32BQ92688 251 aaKnown RBP17.67■□□□□ 0.42
SC5D-202ENST00000392789 EVI5LQ96CN4 794 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 KAZALD1Q96I82 304 aa17.67■□□□□ 0.42
SC5D-202ENST00000392789 MEGF6O75095 1541 aa17.66■□□□□ 0.42
SC5D-202ENST00000392789 G3BP1Q13283 466 aaKnown RBP eCLIP17.66■□□□□ 0.42
SC5D-202ENST00000392789 SLC39A6Q13433 755 aa17.66■□□□□ 0.42
SC5D-202ENST00000392789 TTC14Q96N46 770 aa17.66■□□□□ 0.42
SC5D-202ENST00000392789 IFNL2Q8IZJ0 200 aa17.65■□□□□ 0.42
SC5D-202ENST00000392789 MRC1P22897 1456 aa17.65■□□□□ 0.42
SC5D-202ENST00000392789 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
SC5D-202ENST00000392789 CLCN1P35523 988 aa17.65■□□□□ 0.42
SC5D-202ENST00000392789 WDR33Q9C0J8 1336 aaKnown RBP17.65■□□□□ 0.42
SC5D-202ENST00000392789 RASEFQ8IZ41 740 aa17.64■□□□□ 0.41
SC5D-202ENST00000392789 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.41
SC5D-202ENST00000392789 TMEM94Q12767 1356 aa17.64■□□□□ 0.41
SC5D-202ENST00000392789 SASH1O94885 1247 aa17.64■□□□□ 0.41
SC5D-202ENST00000392789 CHAMP1Q96JM3 812 aa17.64■□□□□ 0.41
SC5D-202ENST00000392789 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 HIP1O00291 1037 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 MYL6BP14649 208 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 AK2P54819 239 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 XAGE3Q8WTP9 111 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 PPP1R9BQ96SB3 815 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 PKD1L3Q7Z443 1732 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 DCAF5Q96JK2 942 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
SC5D-202ENST00000392789 RBM27Q9P2N5 1060 aaKnown RBP17.63■□□□□ 0.41
SC5D-202ENST00000392789 LIMCH1Q9UPQ0 1083 aa17.63■□□□□ 0.41
SC5D-202ENST00000392789 ESPNB1AK53 854 aa17.62■□□□□ 0.41
SC5D-202ENST00000392789 GCKRQ14397 625 aa17.62■□□□□ 0.41
SC5D-202ENST00000392789 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
SC5D-202ENST00000392789 EAF2Q96CJ1 260 aaPredicted RBP17.62■□□□□ 0.41
SC5D-202ENST00000392789 ZNF496Q96IT1 587 aaPredicted RBP17.62■□□□□ 0.41
SC5D-202ENST00000392789 SNRPA1P09661 255 aaKnown RBP17.61■□□□□ 0.41
SC5D-202ENST00000392789 COPS6Q7L5N1 327 aa17.61■□□□□ 0.41
SC5D-202ENST00000392789 TMEM63CQ9P1W3 806 aa17.61■□□□□ 0.41
SC5D-202ENST00000392789 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
SC5D-202ENST00000392789 KCNB2Q92953 911 aa17.61■□□□□ 0.41
SC5D-202ENST00000392789 MYD88Q99836 296 aa17.61■□□□□ 0.41
SC5D-202ENST00000392789 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.61■□□□□ 0.41
SC5D-202ENST00000392789 RPAP1Q9BWH6 1393 aaPredicted RBP17.61■□□□□ 0.41
SC5D-202ENST00000392789 PTH1RQ03431 593 aa17.6■□□□□ 0.41
SC5D-202ENST00000392789 RUFY3Q7L099 469 aa17.6■□□□□ 0.41
SC5D-202ENST00000392789 DDX17Q92841 729 aaKnown RBP17.6■□□□□ 0.41
SC5D-202ENST00000392789 TM6SF1Q9BZW5 370 aa17.6■□□□□ 0.41
SC5D-202ENST00000392789 CCDC171Q6TFL3 1326 aa17.6■□□□□ 0.41
SC5D-202ENST00000392789 STRCP1A6NGW2 1772 aa17.6■□□□□ 0.41
SC5D-202ENST00000392789 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
SC5D-202ENST00000392789 LRSAM1Q6UWE0 723 aa17.6■□□□□ 0.41
SC5D-202ENST00000392789 VPS53Q5VIR6 699 aa17.59■□□□□ 0.41
SC5D-202ENST00000392789 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
SC5D-202ENST00000392789 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
SC5D-202ENST00000392789 CCDC8Q9H0W5 538 aaPredicted RBP17.59■□□□□ 0.41
SC5D-202ENST00000392789 SIL1Q9H173 461 aa17.59■□□□□ 0.41
SC5D-202ENST00000392789 NSFL1CQ9UNZ2 370 aaKnown RBP17.59■□□□□ 0.41
SC5D-202ENST00000392789 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
SC5D-202ENST00000392789 LRP10Q7Z4F1 713 aa17.59■□□□□ 0.41
SC5D-202ENST00000392789 JAKMIP1Q96N16 626 aaKnown RBP17.59■□□□□ 0.41
SC5D-202ENST00000392789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.59■□□□□ 0.41
SC5D-202ENST00000392789 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms