RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SPG7Q9UQ90 795 aa13.09□□□□□ -0.31
BRF1-204ENST00000392557 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
BRF1-204ENST00000392557 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
BRF1-204ENST00000392557 TSPY26PQ9H489 355 aa13.08□□□□□ -0.32
BRF1-204ENST00000392557 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
BRF1-204ENST00000392557 CCDC39Q9UFE4 941 aa13.08□□□□□ -0.32
BRF1-204ENST00000392557 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
BRF1-204ENST00000392557 MX1P20591 662 aa13.07□□□□□ -0.32
BRF1-204ENST00000392557 ZNF830Q96NB3 372 aaPredicted RBP13.07□□□□□ -0.32
BRF1-204ENST00000392557 PDCL3Q9H2J4 239 aa13.07□□□□□ -0.32
BRF1-204ENST00000392557 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
BRF1-204ENST00000392557 KIAA2012Q0VF49 1180 aa13.07□□□□□ -0.32
BRF1-204ENST00000392557 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
BRF1-204ENST00000392557 RIC3Q7Z5B4 369 aa13.07□□□□□ -0.32
BRF1-204ENST00000392557 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
BRF1-204ENST00000392557 JARID2Q92833 1246 aaPredicted RBP13.06□□□□□ -0.32
BRF1-204ENST00000392557 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
BRF1-204ENST00000392557 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
BRF1-204ENST00000392557 NOL7Q9UMY1 257 aaKnown RBP13.06□□□□□ -0.32
BRF1-204ENST00000392557 FIBPO43427 364 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 ESYT1Q9BSJ8 1104 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 ZKSCAN5Q9Y2L8 839 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 PHKG2P15735 406 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 BEND3Q5T5X7 828 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 CHMP4AQ9BY43 222 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 CABP4P57796 275 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
BRF1-204ENST00000392557 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
BRF1-204ENST00000392557 ZNF330Q9Y3S2 320 aaPredicted RBP13.05□□□□□ -0.32
BRF1-204ENST00000392557 RGPD5Q99666 1765 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 PHF14O94880 888 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 KCNJ4P48050 445 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 EVA1CP58658 441 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 SLAIN2Q9P270 581 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 SOS1Q07889 1333 aaPredicted RBP13.04□□□□□ -0.32
BRF1-204ENST00000392557 SPATA31A3Q5VYP0 1347 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
BRF1-204ENST00000392557 MCM2P49736 904 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 USP25Q9UHP3 1055 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 PA2G4Q9UQ80 394 aaKnown RBP13.04□□□□□ -0.32
BRF1-204ENST00000392557 HOXB7P09629 217 aa13.04□□□□□ -0.32
BRF1-204ENST00000392557 A0A0G2JS52 829 aa13.03□□□□□ -0.32
BRF1-204ENST00000392557 CYP27B1O15528 508 aa13.03□□□□□ -0.32
BRF1-204ENST00000392557 SLIT3O75094 1523 aa13.03□□□□□ -0.32
BRF1-204ENST00000392557 LRRC37A3O60309 1634 aa13.03□□□□□ -0.32
BRF1-204ENST00000392557 DDX58O95786 925 aaKnown RBP13.03□□□□□ -0.32
BRF1-204ENST00000392557 CYP2E1P05181 493 aaPredicted RBP13.03□□□□□ -0.32
BRF1-204ENST00000392557 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
BRF1-204ENST00000392557 SIL1Q9H173 461 aa13.03□□□□□ -0.32
BRF1-204ENST00000392557 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
BRF1-204ENST00000392557 KSR2Q6VAB6 950 aa13.02□□□□□ -0.32
BRF1-204ENST00000392557 USP48Q86UV5 1035 aa13.02□□□□□ -0.32
BRF1-204ENST00000392557 XAGE3Q8WTP9 111 aa13.02□□□□□ -0.32
BRF1-204ENST00000392557 USP16Q9Y5T5 823 aa13.02□□□□□ -0.32
BRF1-204ENST00000392557 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.32
BRF1-204ENST00000392557 KAT6BQ8WYB5 2073 aa13.02□□□□□ -0.32
BRF1-204ENST00000392557 ADCY9O60503 1353 aa13.02□□□□□ -0.32
BRF1-204ENST00000392557 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.32
BRF1-204ENST00000392557 COPS6Q7L5N1 327 aa13.02□□□□□ -0.32
BRF1-204ENST00000392557 MEGF6O75095 1541 aa13.02□□□□□ -0.33
BRF1-204ENST00000392557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.02□□□□□ -0.33
BRF1-204ENST00000392557 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
BRF1-204ENST00000392557 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.33
BRF1-204ENST00000392557 VPS37CA5D8V6 355 aaPredicted RBP13.01□□□□□ -0.33
BRF1-204ENST00000392557 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
BRF1-204ENST00000392557 RHPN1Q8TCX5 695 aa13.01□□□□□ -0.33
BRF1-204ENST00000392557 MYD88Q99836 296 aa13.01□□□□□ -0.33
BRF1-204ENST00000392557 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
BRF1-204ENST00000392557 USP54Q70EL1 1684 aa13.01□□□□□ -0.33
BRF1-204ENST00000392557 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
BRF1-204ENST00000392557 CHMLP26374 656 aa13.01□□□□□ -0.33
BRF1-204ENST00000392557 NEXNQ0ZGT2 675 aa13.01□□□□□ -0.33
BRF1-204ENST00000392557 UNC5CLQ8IV45 518 aa13.01□□□□□ -0.33
BRF1-204ENST00000392557 C17orf53Q8N3J3 647 aaPredicted RBP13.01□□□□□ -0.33
BRF1-204ENST00000392557 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
BRF1-204ENST00000392557 WDR33Q9C0J8 1336 aaKnown RBP13.01□□□□□ -0.33
BRF1-204ENST00000392557 STRCP1A6NGW2 1772 aa13□□□□□ -0.33
BRF1-204ENST00000392557 KDM4FA0A1W2PPD8 638 aa13□□□□□ -0.33
BRF1-204ENST00000392557 SSH3Q8TE77 659 aa13□□□□□ -0.33
BRF1-204ENST00000392557 DDX21Q9NR30 783 aaKnown RBP eCLIP13□□□□□ -0.33
BRF1-204ENST00000392557 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
BRF1-204ENST00000392557 ATP5J2-PTCD1G3V325 749 aa13□□□□□ -0.33
BRF1-204ENST00000392557 TULP1O00294 542 aaPredicted RBP13□□□□□ -0.33
BRF1-204ENST00000392557 SPC24Q8NBT2 197 aa13□□□□□ -0.33
BRF1-204ENST00000392557 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
BRF1-204ENST00000392557 PRDM10Q9NQV6 1147 aa13□□□□□ -0.33
BRF1-204ENST00000392557 TRPM3Q9HCF6 1732 aaPredicted RBP13□□□□□ -0.33
BRF1-204ENST00000392557 FAM177BA6PVY3 158 aa13□□□□□ -0.33
BRF1-204ENST00000392557 CPA1P15085 419 aa13□□□□□ -0.33
BRF1-204ENST00000392557 HS1BP3Q53T59 392 aa13□□□□□ -0.33
BRF1-204ENST00000392557 TSC1Q92574 1164 aa13□□□□□ -0.33
BRF1-204ENST00000392557 DCAF5Q96JK2 942 aa13□□□□□ -0.33
BRF1-204ENST00000392557 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
BRF1-204ENST00000392557 BRD1O95696 1058 aa12.99□□□□□ -0.33
BRF1-204ENST00000392557 KLHDC4Q8TBB5 520 aa12.99□□□□□ -0.33
BRF1-204ENST00000392557 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
BRF1-204ENST00000392557 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRF1-204ENST00000392557 NCAPD2Q15021 1401 aa12.99□□□□□ -0.33
BRF1-204ENST00000392557 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms