RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ECHDC1Q9NTX5 307 aa14.89□□□□□ -0.03
RFC5-201ENST00000392542 PA2G4Q9UQ80 394 aaKnown RBP14.89□□□□□ -0.03
RFC5-201ENST00000392542 GRM8O00222 908 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 CCDC173Q0VFZ6 552 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 PDIA6Q15084 440 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 KIAA1211Q6ZU35 1233 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 SUCLG2Q96I99 432 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 ZC3H6P61129 1189 aaKnown RBP14.88□□□□□ -0.03
RFC5-201ENST00000392542 CWC27Q6UX04 472 aaKnown RBP14.88□□□□□ -0.03
RFC5-201ENST00000392542 CHAMP1Q96JM3 812 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 C19orf44Q9H6X5 657 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 DIAPH3Q9NSV4 1193 aa14.88□□□□□ -0.03
RFC5-201ENST00000392542 KDM6AO15550 1401 aaPredicted RBP14.88□□□□□ -0.03
RFC5-201ENST00000392542 IFIT2P09913 472 aaKnown RBP14.87□□□□□ -0.03
RFC5-201ENST00000392542 RUFY2Q8WXA3 655 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 RAPGEF4Q8WZA2 1011 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 TRIM44Q96DX7 344 aaPredicted RBP14.87□□□□□ -0.03
RFC5-201ENST00000392542 TTC14Q96N46 770 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 PPP1R9BQ96SB3 815 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 MBD3O95983 291 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 ZNF790Q6PG37 636 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 KAZALD1Q96I82 304 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 SLC52A2Q9HAB3 445 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 ABCC6O95255 1503 aa14.87□□□□□ -0.03
RFC5-201ENST00000392542 NPHP3Q7Z494 1330 aa14.86□□□□□ -0.03
RFC5-201ENST00000392542 AIMP1Q12904 312 aaKnown RBP14.86□□□□□ -0.03
RFC5-201ENST00000392542 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
RFC5-201ENST00000392542 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.86□□□□□ -0.03
RFC5-201ENST00000392542 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
RFC5-201ENST00000392542 ESPNB1AK53 854 aa14.86□□□□□ -0.03
RFC5-201ENST00000392542 TATP17735 454 aaPredicted RBP14.86□□□□□ -0.03
RFC5-201ENST00000392542 ANP32BQ92688 251 aaKnown RBP14.86□□□□□ -0.03
RFC5-201ENST00000392542 BICC1Q9H694 974 aaKnown RBP14.86□□□□□ -0.03
RFC5-201ENST00000392542 SPG7Q9UQ90 795 aa14.86□□□□□ -0.03
RFC5-201ENST00000392542 COL18A1P39060 1754 aa14.86□□□□□ -0.03
RFC5-201ENST00000392542 PHKG2P15735 406 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 SLC39A6Q13433 755 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 LARP1Q6PKG0 1096 aaKnown RBP14.85□□□□□ -0.03
RFC5-201ENST00000392542 AACSQ86V21 672 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 NLRP2Q9NX02 1062 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 WDR33Q9C0J8 1336 aaKnown RBP14.85□□□□□ -0.03
RFC5-201ENST00000392542 IGKV5-2P06315 115 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 G3BP1Q13283 466 aaKnown RBP eCLIP14.85□□□□□ -0.03
RFC5-201ENST00000392542 RIC3Q7Z5B4 369 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 EVI5LQ96CN4 794 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 TMEM63CQ9P1W3 806 aa14.85□□□□□ -0.03
RFC5-201ENST00000392542 SASH1O94885 1247 aa14.84□□□□□ -0.03
RFC5-201ENST00000392542 AK2P54819 239 aa14.84□□□□□ -0.03
RFC5-201ENST00000392542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.84□□□□□ -0.03
RFC5-201ENST00000392542 NSFL1CQ9UNZ2 370 aaKnown RBP14.84□□□□□ -0.03
RFC5-201ENST00000392542 MEGF6O75095 1541 aa14.84□□□□□ -0.03
RFC5-201ENST00000392542 RPAP1Q9BWH6 1393 aaPredicted RBP14.84□□□□□ -0.03
RFC5-201ENST00000392542 ERBB4Q15303 1308 aa14.83□□□□□ -0.03
RFC5-201ENST00000392542 NEXNQ0ZGT2 675 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 LRSAM1Q6UWE0 723 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 RBSNQ9H1K0 784 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 LIMCH1Q9UPQ0 1083 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 PLEKHG2Q9H7P9 1386 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 MRC1P22897 1456 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 NEURL1BA8MQ27 555 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 PRIM1P49642 420 aaKnown RBP14.83□□□□□ -0.04
RFC5-201ENST00000392542 PTH1RQ03431 593 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 IFNL2Q8IZJ0 200 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 KCNB2Q92953 911 aa14.83□□□□□ -0.04
RFC5-201ENST00000392542 MYL6BP14649 208 aa14.82□□□□□ -0.04
RFC5-201ENST00000392542 RUFY3Q7L099 469 aa14.82□□□□□ -0.04
RFC5-201ENST00000392542 NFATC2IPQ8NCF5 419 aa14.82□□□□□ -0.04
RFC5-201ENST00000392542 XAGE3Q8WTP9 111 aa14.82□□□□□ -0.04
RFC5-201ENST00000392542 EAF2Q96CJ1 260 aaPredicted RBP14.82□□□□□ -0.04
RFC5-201ENST00000392542 HIP1O00291 1037 aa14.82□□□□□ -0.04
RFC5-201ENST00000392542 ATF3P18847 181 aa14.82□□□□□ -0.04
RFC5-201ENST00000392542 CASTP20810 708 aaKnown RBP14.82□□□□□ -0.04
RFC5-201ENST00000392542 METTL22Q9BUU2 404 aaPredicted RBP14.82□□□□□ -0.04
RFC5-201ENST00000392542 GCKRQ14397 625 aa14.81□□□□□ -0.04
RFC5-201ENST00000392542 COPS6Q7L5N1 327 aa14.81□□□□□ -0.04
RFC5-201ENST00000392542 TM6SF1Q9BZW5 370 aa14.81□□□□□ -0.04
RFC5-201ENST00000392542 CCDC8Q9H0W5 538 aaPredicted RBP14.81□□□□□ -0.04
RFC5-201ENST00000392542 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.81□□□□□ -0.04
RFC5-201ENST00000392542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.81□□□□□ -0.04
RFC5-201ENST00000392542 PKD1L3Q7Z443 1732 aa14.81□□□□□ -0.04
RFC5-201ENST00000392542 DCCP43146 1447 aa14.81□□□□□ -0.04
RFC5-201ENST00000392542 CCDC171Q6TFL3 1326 aa14.81□□□□□ -0.04
RFC5-201ENST00000392542 PRPF40BQ6NWY9 871 aaKnown RBP14.81□□□□□ -0.04
RFC5-201ENST00000392542 ZNF496Q96IT1 587 aaPredicted RBP14.81□□□□□ -0.04
RFC5-201ENST00000392542 MYD88Q99836 296 aa14.81□□□□□ -0.04
RFC5-201ENST00000392542 SYCE3A1L190 88 aa14.8□□□□□ -0.04
RFC5-201ENST00000392542 VPS53Q5VIR6 699 aa14.8□□□□□ -0.04
RFC5-201ENST00000392542 TMEM94Q12767 1356 aa14.8□□□□□ -0.04
RFC5-201ENST00000392542 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
RFC5-201ENST00000392542 NECTIN1Q15223 517 aa14.8□□□□□ -0.04
RFC5-201ENST00000392542 LRP10Q7Z4F1 713 aa14.8□□□□□ -0.04
RFC5-201ENST00000392542 DDX17Q92841 729 aaKnown RBP14.8□□□□□ -0.04
RFC5-201ENST00000392542 JAKMIP1Q96N16 626 aaKnown RBP14.8□□□□□ -0.04
RFC5-201ENST00000392542 ZSWIM6Q9HCJ5 1215 aa14.8□□□□□ -0.04
RFC5-201ENST00000392542 TCHHQ07283 1943 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 AFDNP55196 1824 aaKnown RBP14.79□□□□□ -0.04
RFC5-201ENST00000392542 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
RFC5-201ENST00000392542 CPA1P15085 419 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 TTC5Q8N0Z6 440 aa14.79□□□□□ -0.04
RFC5-201ENST00000392542 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms