RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 SSH1Q8WYL5 1049 aa32.53■■■□□ 2.8
HOMER3-202ENST00000392351 BCL2L13Q9BXK5 485 aa32.53■■■□□ 2.8
HOMER3-202ENST00000392351 MAP3K15Q6ZN16 1313 aa32.52■■■□□ 2.8
HOMER3-202ENST00000392351 ZBTB3Q9H5J0 574 aa32.52■■■□□ 2.8
HOMER3-202ENST00000392351 ALDH1L2Q3SY69 923 aa32.51■■■□□ 2.79
HOMER3-202ENST00000392351 G2E3Q7L622 706 aa32.51■■■□□ 2.79
HOMER3-202ENST00000392351 MTFR1LQ9H019 292 aa32.51■■■□□ 2.79
HOMER3-202ENST00000392351 ARFGEF2Q9Y6D5 1785 aa32.51■■■□□ 2.79
HOMER3-202ENST00000392351 BCL2L12Q9HB09 334 aa32.5■■■□□ 2.79
HOMER3-202ENST00000392351 COL24A1Q17RW2 1714 aa32.5■■■□□ 2.79
HOMER3-202ENST00000392351 SMC4Q9NTJ3 1288 aa32.49■■■□□ 2.79
HOMER3-202ENST00000392351 RARSP54136 660 aaKnown RBP32.49■■■□□ 2.79
HOMER3-202ENST00000392351 FLIIQ13045 1269 aa32.49■■■□□ 2.79
HOMER3-202ENST00000392351 FKBP8Q14318 412 aa32.49■■■□□ 2.79
HOMER3-202ENST00000392351 ATF5Q9Y2D1 282 aaPredicted RBP32.49■■■□□ 2.79
HOMER3-202ENST00000392351 ERVV-1B6SEH8 477 aa32.48■■■□□ 2.79
HOMER3-202ENST00000392351 MRPL50Q8N5N7 158 aaKnown RBP32.48■■■□□ 2.79
HOMER3-202ENST00000392351 HLFQ16534 295 aa32.47■■■□□ 2.79
HOMER3-202ENST00000392351 NLGN1Q8N2Q7 840 aa32.47■■■□□ 2.79
HOMER3-202ENST00000392351 ZNF652Q9Y2D9 606 aa32.47■■■□□ 2.79
HOMER3-202ENST00000392351 ANKRD13DQ6ZTN6 518 aa32.46■■■□□ 2.79
HOMER3-202ENST00000392351 PLBD2Q8NHP8 589 aa32.45■■■□□ 2.79
HOMER3-202ENST00000392351 ANKRD36CQ5JPF3 1778 aa32.45■■■□□ 2.79
HOMER3-202ENST00000392351 DDX58O95786 925 aaKnown RBP32.45■■■□□ 2.78
HOMER3-202ENST00000392351 CLEC4GQ6UXB4 293 aa32.45■■■□□ 2.78
HOMER3-202ENST00000392351 FKBP5Q13451 457 aaPredicted RBP32.44■■■□□ 2.78
HOMER3-202ENST00000392351 RGL2O15211 777 aa32.43■■■□□ 2.78
HOMER3-202ENST00000392351 GIGYF2Q6Y7W6 1299 aaKnown RBP32.43■■■□□ 2.78
HOMER3-202ENST00000392351 RIC3Q7Z5B4 369 aa32.43■■■□□ 2.78
HOMER3-202ENST00000392351 SPON1Q9HCB6 807 aa32.42■■■□□ 2.78
HOMER3-202ENST00000392351 TBC1D9BQ66K14 1250 aa32.41■■■□□ 2.78
HOMER3-202ENST00000392351 BICDL1Q6ZP65 573 aa32.41■■■□□ 2.78
HOMER3-202ENST00000392351 ADCY9O60503 1353 aa32.4■■■□□ 2.78
HOMER3-202ENST00000392351 PI4KAP2A4QPH2 592 aa32.4■■■□□ 2.78
HOMER3-202ENST00000392351 BCAR3O75815 825 aa32.4■■■□□ 2.78
HOMER3-202ENST00000392351 MMP10P09238 476 aa32.4■■■□□ 2.78
HOMER3-202ENST00000392351 NFIXQ14938 502 aa32.4■■■□□ 2.78
HOMER3-202ENST00000392351 KSR2Q6VAB6 950 aa32.4■■■□□ 2.78
HOMER3-202ENST00000392351 PI4KAP1Q8N8J0 262 aa32.4■■■□□ 2.78
HOMER3-202ENST00000392351 ATP10DQ9P241 1426 aa32.39■■■□□ 2.78
HOMER3-202ENST00000392351 BRPF1P55201 1214 aaPredicted RBP32.38■■■□□ 2.77
HOMER3-202ENST00000392351 MAP3K2Q9Y2U5 619 aa32.38■■■□□ 2.77
HOMER3-202ENST00000392351 POLD1P28340 1107 aa32.37■■■□□ 2.77
HOMER3-202ENST00000392351 TM4SF1P30408 202 aa32.37■■■□□ 2.77
HOMER3-202ENST00000392351 NIP7Q9Y221 180 aaKnown RBP eCLIP32.37■■■□□ 2.77
HOMER3-202ENST00000392351 PTGER2P43116 358 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 SGIP1Q9BQI5 828 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 SRCAPQ6ZRS2 3230 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 AFDNP55196 1824 aaKnown RBP32.36■■■□□ 2.77
HOMER3-202ENST00000392351 PTPRCP08575 1304 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 KIF16BQ96L93 1317 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 HSP90AB3PQ58FF7 597 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 SETDB2Q96T68 719 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 RCAN3Q9UKA8 241 aa32.36■■■□□ 2.77
HOMER3-202ENST00000392351 GPTP24298 496 aa32.35■■■□□ 2.77
HOMER3-202ENST00000392351 DDR1Q08345 913 aa32.35■■■□□ 2.77
HOMER3-202ENST00000392351 CARMIL3Q8ND23 1372 aa32.35■■■□□ 2.77
HOMER3-202ENST00000392351 TCIRG1Q13488 830 aa32.34■■■□□ 2.77
HOMER3-202ENST00000392351 NOB1Q9ULX3 412 aaKnown RBP32.34■■■□□ 2.77
HOMER3-202ENST00000392351 ZNF34Q8IZ26 560 aa32.33■■■□□ 2.77
HOMER3-202ENST00000392351 METTL22Q9BUU2 404 aaPredicted RBP32.33■■■□□ 2.77
HOMER3-202ENST00000392351 PARP3Q9Y6F1 533 aa32.33■■■□□ 2.77
HOMER3-202ENST00000392351 F6X3S4 739 aa32.32■■■□□ 2.77
HOMER3-202ENST00000392351 POLRMTO00411 1230 aaKnown RBP32.32■■■□□ 2.77
HOMER3-202ENST00000392351 DNAAF4Q8WXU2 420 aa32.32■■■□□ 2.77
HOMER3-202ENST00000392351 MYD88Q99836 296 aa32.32■■■□□ 2.77
HOMER3-202ENST00000392351 UBN2Q6ZU65 1347 aa32.32■■■□□ 2.76
HOMER3-202ENST00000392351 LRP5O75197 1615 aa32.32■■■□□ 2.76
HOMER3-202ENST00000392351 FRAT1Q92837 279 aaPredicted RBP32.31■■■□□ 2.76
HOMER3-202ENST00000392351 NRXN2Q9P2S2 1712 aa32.3■■■□□ 2.76
HOMER3-202ENST00000392351 ATP5J2-PTCD1G3V325 749 aa32.3■■■□□ 2.76
HOMER3-202ENST00000392351 NEXNQ0ZGT2 675 aa32.29■■■□□ 2.76
HOMER3-202ENST00000392351 SERPINB2P05120 415 aa32.28■■■□□ 2.76
HOMER3-202ENST00000392351 FAM177BA6PVY3 158 aa32.28■■■□□ 2.76
HOMER3-202ENST00000392351 ISCA1Q9BUE6 129 aa32.28■■■□□ 2.76
HOMER3-202ENST00000392351 PARP10Q53GL7 1025 aa32.27■■■□□ 2.76
HOMER3-202ENST00000392351 IPO8O15397 1037 aaKnown RBP32.26■■■□□ 2.75
HOMER3-202ENST00000392351 SLC4A10Q6U841 1118 aa32.26■■■□□ 2.75
HOMER3-202ENST00000392351 NLRP10Q86W26 655 aa32.26■■■□□ 2.75
HOMER3-202ENST00000392351 NBPF5PQ86XG9 351 aaPredicted RBP32.26■■■□□ 2.75
HOMER3-202ENST00000392351 ARHGAP45Q92619 1136 aa32.25■■■□□ 2.75
HOMER3-202ENST00000392351 API5Q9BZZ5 524 aaKnown RBP32.25■■■□□ 2.75
HOMER3-202ENST00000392351 IGKV5-2P06315 115 aa32.24■■■□□ 2.75
HOMER3-202ENST00000392351 SUSD4Q5VX71 490 aa32.24■■■□□ 2.75
HOMER3-202ENST00000392351 N4BP2Q86UW6 1770 aaPredicted RBP32.24■■■□□ 2.75
HOMER3-202ENST00000392351 NPHP1O15259 732 aa32.24■■■□□ 2.75
HOMER3-202ENST00000392351 TRIM28Q13263 835 aaKnown RBP32.24■■■□□ 2.75
HOMER3-202ENST00000392351 CWF19L2Q2TBE0 894 aaKnown RBP32.24■■■□□ 2.75
HOMER3-202ENST00000392351 PPP1R42Q7Z4L9 355 aa32.23■■■□□ 2.75
HOMER3-202ENST00000392351 CNBD1Q8NA66 436 aa32.23■■■□□ 2.75
HOMER3-202ENST00000392351 PPP1R1BQ9UD71 204 aaPredicted RBP32.23■■■□□ 2.75
HOMER3-202ENST00000392351 PXDNLA1KZ92 1463 aa32.22■■■□□ 2.75
HOMER3-202ENST00000392351 ZKSCAN2Q63HK3 967 aa32.22■■■□□ 2.75
HOMER3-202ENST00000392351 ATF7IPQ6VMQ6 1270 aa32.22■■■□□ 2.75
HOMER3-202ENST00000392351 LINS1Q8NG48 757 aa32.22■■■□□ 2.75
HOMER3-202ENST00000392351 IBTKQ9P2D0 1353 aaPredicted RBP32.22■■■□□ 2.75
HOMER3-202ENST00000392351 TRIM27P14373 513 aa32.21■■■□□ 2.75
HOMER3-202ENST00000392351 BEND3Q5T5X7 828 aa32.21■■■□□ 2.75
HOMER3-202ENST00000392351 TPTE2Q6XPS3 522 aa32.21■■■□□ 2.75
HOMER3-202ENST00000392351 CCDC191Q8NCU4 936 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms