RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 SH3PXD2AQ5TCZ1 1133 aa7.47□□□□□ -1.21
RNU6-1009P-201ENST00000390996 POTEAQ6S8J7 498 aa7.47□□□□□ -1.21
RNU6-1009P-201ENST00000390996 TNS4Q8IZW8 715 aa7.47□□□□□ -1.21
RNU6-1009P-201ENST00000390996 DEPDC4Q8N2C3 294 aa7.47□□□□□ -1.21
RNU6-1009P-201ENST00000390996 POM121Q96HA1 1249 aa7.47□□□□□ -1.21
RNU6-1009P-201ENST00000390996 SIN3BO75182 1162 aa7.46□□□□□ -1.22
RNU6-1009P-201ENST00000390996 SPATA31C1P0DKV0 1188 aa7.46□□□□□ -1.22
RNU6-1009P-201ENST00000390996 ADAMTS19Q8TE59 1207 aa7.46□□□□□ -1.22
RNU6-1009P-201ENST00000390996 SLC30A3Q99726 388 aa7.46□□□□□ -1.22
RNU6-1009P-201ENST00000390996 KIAA1024Q9UPX6 916 aa7.46□□□□□ -1.22
RNU6-1009P-201ENST00000390996 STARD13Q9Y3M8 1113 aa7.46□□□□□ -1.22
RNU6-1009P-201ENST00000390996 ZBTB7BO15156 539 aaPredicted RBP7.45□□□□□ -1.22
RNU6-1009P-201ENST00000390996 SFSWAPQ12872 951 aaKnown RBP7.45□□□□□ -1.22
RNU6-1009P-201ENST00000390996 DOC2BQ14184 412 aa7.45□□□□□ -1.22
RNU6-1009P-201ENST00000390996 SERTM1A2A2V5 107 aa7.44□□□□□ -1.22
RNU6-1009P-201ENST00000390996 HIRAP54198 1017 aaPredicted RBP7.44□□□□□ -1.22
RNU6-1009P-201ENST00000390996 TNFRSF25Q93038 417 aa7.44□□□□□ -1.22
RNU6-1009P-201ENST00000390996 PRDM6Q9NQX0 595 aa7.44□□□□□ -1.22
RNU6-1009P-201ENST00000390996 ZNF232Q9UNY5 417 aa7.44□□□□□ -1.22
RNU6-1009P-201ENST00000390996 ALAS2P22557 587 aa7.43□□□□□ -1.22
RNU6-1009P-201ENST00000390996 CLDN10P78369 228 aa7.43□□□□□ -1.22
RNU6-1009P-201ENST00000390996 TRIM50Q86XT4 487 aa7.43□□□□□ -1.22
RNU6-1009P-201ENST00000390996 PLEKHM2Q8IWE5 1019 aa7.43□□□□□ -1.22
RNU6-1009P-201ENST00000390996 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
RNU6-1009P-201ENST00000390996 POM121CA8CG34 1229 aa7.42□□□□□ -1.22
RNU6-1009P-201ENST00000390996 GATA4P43694 442 aa7.42□□□□□ -1.22
RNU6-1009P-201ENST00000390996 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
RNU6-1009P-201ENST00000390996 TPCN2Q8NHX9 752 aa7.42□□□□□ -1.22
RNU6-1009P-201ENST00000390996 UCN2Q96RP3 112 aa7.42□□□□□ -1.22
RNU6-1009P-201ENST00000390996 KRTAP4-8Q9BYQ9 185 aa7.42□□□□□ -1.22
RNU6-1009P-201ENST00000390996 TSPAN10Q9H1Z9 355 aaPredicted RBP7.42□□□□□ -1.22
RNU6-1009P-201ENST00000390996 USP17L3A6NCW0 530 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 USP17L4A6NCW7 530 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 M0R082 166 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 ALBP02768 609 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 KCNQ4P56696 695 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 PSMA6P60900 246 aaKnown RBP7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 SPEM2Q0P670 501 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 RSPO4Q2I0M5 234 aaPredicted RBP7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 CCDC102BQ68D86 513 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 USP17L2Q6R6M4 530 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 USP17L1Q7RTZ2 530 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 ZNF417Q8TAU3 575 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 ZNF587Q96SQ5 575 aaPredicted RBP7.41□□□□□ -1.22
RNU6-1009P-201ENST00000390996 SPDYE3A6NKU9 549 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 DKK1O94907 266 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 NKAPLQ5M9Q1 402 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 C20orf204Q6ZNR8 217 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 C8orf86Q6ZUL3 223 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 MICALL1Q8N3F8 863 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 HSH2DQ96JZ2 352 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
RNU6-1009P-201ENST00000390996 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 M0R2N6 131 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 NID1P14543 1247 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 ADH7P40394 386 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 TYRO3Q06418 890 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 PRRT3Q5FWE3 981 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 RAB44Q7Z6P3 723 aaPredicted RBP7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 WWC1Q8IX03 1113 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 BRD7Q9NPI1 651 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 HCN4Q9Y3Q4 1203 aa7.39□□□□□ -1.23
RNU6-1009P-201ENST00000390996 C21orf2O43822 256 aa7.38□□□□□ -1.23
RNU6-1009P-201ENST00000390996 ATP1A2P50993 1020 aa7.38□□□□□ -1.23
RNU6-1009P-201ENST00000390996 SIX5Q8N196 739 aa7.38□□□□□ -1.23
RNU6-1009P-201ENST00000390996 LARGE2Q8N3Y3 721 aa7.38□□□□□ -1.23
RNU6-1009P-201ENST00000390996 ZNF280CQ8ND82 737 aa7.38□□□□□ -1.23
RNU6-1009P-201ENST00000390996 SUSD3Q96L08 255 aa7.38□□□□□ -1.23
RNU6-1009P-201ENST00000390996 TPSG1Q9NRR2 321 aa7.38□□□□□ -1.23
RNU6-1009P-201ENST00000390996 ATP9BO43861 1147 aa7.37□□□□□ -1.23
RNU6-1009P-201ENST00000390996 FOXD4L6Q3SYB3 417 aaPredicted RBP7.37□□□□□ -1.23
RNU6-1009P-201ENST00000390996 FOXD4L3Q6VB84 417 aaPredicted RBP7.37□□□□□ -1.23
RNU6-1009P-201ENST00000390996 OGFOD1Q8N543 542 aa7.37□□□□□ -1.23
RNU6-1009P-201ENST00000390996 CEP63Q96MT8 703 aa7.37□□□□□ -1.23
RNU6-1009P-201ENST00000390996 ANKIB1Q9P2G1 1089 aa7.37□□□□□ -1.23
RNU6-1009P-201ENST00000390996 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
RNU6-1009P-201ENST00000390996 PALM3A6NDB9 673 aaPredicted RBP7.36□□□□□ -1.23
RNU6-1009P-201ENST00000390996 SFI1A8K8P3 1242 aa7.36□□□□□ -1.23
RNU6-1009P-201ENST00000390996 HDGFL1Q5TGJ6 251 aa7.36□□□□□ -1.23
RNU6-1009P-201ENST00000390996 TSEN2Q8NCE0 465 aaKnown RBP7.36□□□□□ -1.23
RNU6-1009P-201ENST00000390996 APBA3O96018 575 aa7.35□□□□□ -1.23
RNU6-1009P-201ENST00000390996 NEUROD1Q13562 356 aa7.35□□□□□ -1.23
RNU6-1009P-201ENST00000390996 ZMYM1Q5SVZ6 1142 aa7.35□□□□□ -1.23
RNU6-1009P-201ENST00000390996 MKRN1Q9UHC7 482 aaKnown RBP7.35□□□□□ -1.23
RNU6-1009P-201ENST00000390996 RAD21O60216 631 aa7.34□□□□□ -1.23
RNU6-1009P-201ENST00000390996 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
RNU6-1009P-201ENST00000390996 STAG2Q8N3U4 1231 aa7.34□□□□□ -1.23
RNU6-1009P-201ENST00000390996 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
RNU6-1009P-201ENST00000390996 CHMP3Q9Y3E7 222 aa7.34□□□□□ -1.23
RNU6-1009P-201ENST00000390996 DYRK3O43781 588 aa7.33□□□□□ -1.24
RNU6-1009P-201ENST00000390996 PPP1R12BO60237 982 aaPredicted RBP7.33□□□□□ -1.24
RNU6-1009P-201ENST00000390996 GRIK4Q16099 956 aa7.33□□□□□ -1.24
RNU6-1009P-201ENST00000390996 BTLAQ7Z6A9 289 aa7.33□□□□□ -1.24
RNU6-1009P-201ENST00000390996 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
RNU6-1009P-201ENST00000390996 NACC1Q96RE7 527 aa7.33□□□□□ -1.24
RNU6-1009P-201ENST00000390996 FLIIQ13045 1269 aa7.32□□□□□ -1.24
RNU6-1009P-201ENST00000390996 ILDR2Q71H61 639 aa7.32□□□□□ -1.24
RNU6-1009P-201ENST00000390996 BHMTQ93088 406 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms