RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 SFSWAPQ12872 951 aaKnown RBP4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 MTFR1Q15390 333 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 SHISA2Q6UWI4 295 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 BICDL1Q6ZP65 573 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 TXNRD3Q86VQ6 643 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 TNFRSF25Q93038 417 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 TP53INP1Q96A56 240 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 SLC4A9Q96Q91 983 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 TMEM229AB2RXF0 380 aa4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 SLFNL1Q499Z3 407 aa4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 TRAPPC3LQ5T215 181 aa4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 MCTP1Q6DN14 999 aa4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 LRRC69Q6ZNQ3 347 aa4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 SSBP4Q9BWG4 385 aaPredicted RBP4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 SNRKQ9NRH2 765 aa4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 CABP1Q9NZU7 370 aa4.43□□□□□ -1.7
RNU6-239P-201ENST00000390990 A0A0A0MRY4 1105 aa4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 ADH7P40394 386 aa4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 NRG1Q02297 640 aaPredicted RBP4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 RAB44Q7Z6P3 723 aaPredicted RBP4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 ZDHHC1Q8WTX9 485 aa4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 C7orf43Q8WVR3 580 aa4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 LENG1Q96BZ8 264 aaPredicted RBP4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 SIRT1Q96EB6 747 aa4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
RNU6-239P-201ENST00000390990 SOCS7O14512 581 aa4.41□□□□□ -1.7
RNU6-239P-201ENST00000390990 ELNP15502 786 aa4.41□□□□□ -1.7
RNU6-239P-201ENST00000390990 BANK1Q8NDB2 785 aa4.41□□□□□ -1.7
RNU6-239P-201ENST00000390990 LILRB5O75023 590 aa4.4□□□□□ -1.71
RNU6-239P-201ENST00000390990 SPEM2Q0P670 501 aa4.4□□□□□ -1.71
RNU6-239P-201ENST00000390990 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
RNU6-239P-201ENST00000390990 L3MBTL2Q969R5 705 aa4.4□□□□□ -1.71
RNU6-239P-201ENST00000390990 RNF112Q9ULX5 631 aa4.4□□□□□ -1.71
RNU6-239P-201ENST00000390990 COL17A1Q9UMD9 1497 aaPredicted RBP4.4□□□□□ -1.71
RNU6-239P-201ENST00000390990 EML1O00423 815 aa4.39□□□□□ -1.71
RNU6-239P-201ENST00000390990 EIF4G2P78344 907 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-239P-201ENST00000390990 IRF5Q13568 498 aa4.39□□□□□ -1.71
RNU6-239P-201ENST00000390990 ILDR2Q71H61 639 aa4.39□□□□□ -1.71
RNU6-239P-201ENST00000390990 PCDHGA11Q9Y5H2 935 aa4.39□□□□□ -1.71
RNU6-239P-201ENST00000390990 RAC1P63000 192 aa4.38□□□□□ -1.71
RNU6-239P-201ENST00000390990 PLPP7Q8NBV4 271 aa4.38□□□□□ -1.71
RNU6-239P-201ENST00000390990 IL27Q8NEV9 243 aa4.38□□□□□ -1.71
RNU6-239P-201ENST00000390990 FMNL2Q96PY5 1086 aa4.38□□□□□ -1.71
RNU6-239P-201ENST00000390990 SCHIP1Q9P0W5 487 aaPredicted RBP4.38□□□□□ -1.71
RNU6-239P-201ENST00000390990 USP21Q9UK80 565 aa4.38□□□□□ -1.71
RNU6-239P-201ENST00000390990 TBC1D2BQ9UPU7 963 aa4.38□□□□□ -1.71
RNU6-239P-201ENST00000390990 PAX4O43316 350 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 COBLO75128 1261 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 NOS2P35228 1153 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 TEAD4Q15561 434 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 MAP7D1Q3KQU3 841 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 TBCELQ5QJ74 424 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 SH3PXD2AQ5TCZ1 1133 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 DMRTC2Q8IXT2 367 aaPredicted RBP4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 FMR1NBQ8N0W7 255 aaPredicted RBP4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 NUDT8Q8WV74 236 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 NEUROD4Q9HD90 331 aa4.37□□□□□ -1.71
RNU6-239P-201ENST00000390990 TXKP42681 527 aa4.36□□□□□ -1.71
RNU6-239P-201ENST00000390990 AFF1P51825 1210 aaKnown RBP4.36□□□□□ -1.71
RNU6-239P-201ENST00000390990 NEUROD1Q13562 356 aa4.36□□□□□ -1.71
RNU6-239P-201ENST00000390990 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-239P-201ENST00000390990 WFDC12Q8WWY7 111 aa4.36□□□□□ -1.71
RNU6-239P-201ENST00000390990 JPH1Q9HDC5 661 aaPredicted RBP4.36□□□□□ -1.71
RNU6-239P-201ENST00000390990 BRD7Q9NPI1 651 aa4.36□□□□□ -1.71
RNU6-239P-201ENST00000390990 YBX3P16989 372 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 NOS3P29474 1203 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 IREB2P48200 963 aaKnown RBP4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 EPHA4P54764 986 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 KCNQ4P56696 695 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 VAC14Q08AM6 782 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 TBC1D8BQ0IIM8 1120 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 BHMTQ93088 406 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 HSH2DQ96JZ2 352 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 CEP63Q96MT8 703 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 IGFLR1Q9H665 355 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 PCMTD2Q9NV79 361 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 ZNF358Q9NW07 568 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 SLC6A14Q9UN76 642 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 ZNF232Q9UNY5 417 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 KCNH4Q9UQ05 1017 aa4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 GPC6Q9Y625 555 aaPredicted RBP4.35□□□□□ -1.71
RNU6-239P-201ENST00000390990 SFI1A8K8P3 1242 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 APBB1O00213 710 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 BACH1O14867 736 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 SSTR4P31391 388 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 PSAPL1Q6NUJ1 521 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 SLC9A9Q8IVB4 645 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 TNS4Q8IZW8 715 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 ZNF280CQ8ND82 737 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 RHPN1Q8TCX5 695 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 MEGF10Q96KG7 1140 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 UBE2OQ9C0C9 1292 aaKnown RBP4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 NAGPAQ9UK23 515 aa4.34□□□□□ -1.71
RNU6-239P-201ENST00000390990 ARID1BQ8NFD5 2236 aaPredicted RBP4.34□□□□□ -1.72
RNU6-239P-201ENST00000390990 PIK3CDO00329 1044 aa4.33□□□□□ -1.72
RNU6-239P-201ENST00000390990 TYRO3Q06418 890 aa4.33□□□□□ -1.72
RNU6-239P-201ENST00000390990 PRR23CQ6ZRP0 262 aa4.33□□□□□ -1.72
RNU6-239P-201ENST00000390990 SERTM1A2A2V5 107 aa4.32□□□□□ -1.72
RNU6-239P-201ENST00000390990 MED26O95402 600 aa4.32□□□□□ -1.72
RNU6-239P-201ENST00000390990 CD97P48960 835 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms