RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 AEBP1Q8IUX7 1158 aa8.71□□□□□ -1.02
TRAV1-2-201ENST00000390423 BRIP1Q9BX63 1249 aa8.71□□□□□ -1.02
TRAV1-2-201ENST00000390423 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.02
TRAV1-2-201ENST00000390423 SCN11AQ9UI33 1791 aa8.71□□□□□ -1.02
TRAV1-2-201ENST00000390423 SCN7AQ01118 1682 aa8.7□□□□□ -1.02
TRAV1-2-201ENST00000390423 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
TRAV1-2-201ENST00000390423 PDE6BP35913 854 aa8.7□□□□□ -1.02
TRAV1-2-201ENST00000390423 SLC39A6Q13433 755 aa8.7□□□□□ -1.02
TRAV1-2-201ENST00000390423 PLEKHO1Q53GL0 409 aaPredicted RBP8.7□□□□□ -1.02
TRAV1-2-201ENST00000390423 PRPF38BQ5VTL8 546 aaKnown RBP8.7□□□□□ -1.02
TRAV1-2-201ENST00000390423 COL4A5P29400 1685 aa8.69□□□□□ -1.02
TRAV1-2-201ENST00000390423 SRGNP10124 158 aa8.69□□□□□ -1.02
TRAV1-2-201ENST00000390423 ECE1P42892 770 aa8.69□□□□□ -1.02
TRAV1-2-201ENST00000390423 TNNT2P45379 298 aaPredicted RBP8.69□□□□□ -1.02
TRAV1-2-201ENST00000390423 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
TRAV1-2-201ENST00000390423 C1orf141Q5JVX7 400 aa8.68□□□□□ -1.02
TRAV1-2-201ENST00000390423 STYK1Q6J9G0 422 aa8.68□□□□□ -1.02
TRAV1-2-201ENST00000390423 PNMA8AQ86V59 439 aaPredicted RBP8.68□□□□□ -1.02
TRAV1-2-201ENST00000390423 CNKSR1Q969H4 720 aa8.68□□□□□ -1.02
TRAV1-2-201ENST00000390423 TLL2Q9Y6L7 1015 aa8.68□□□□□ -1.02
TRAV1-2-201ENST00000390423 TRPM7Q96QT4 1865 aa8.68□□□□□ -1.02
TRAV1-2-201ENST00000390423 MRC1P22897 1456 aa8.67□□□□□ -1.02
TRAV1-2-201ENST00000390423 FKBP4Q02790 459 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAV1-2-201ENST00000390423 CCDC93Q567U6 631 aa8.67□□□□□ -1.02
TRAV1-2-201ENST00000390423 CCER1Q8TC90 406 aaPredicted RBP8.67□□□□□ -1.02
TRAV1-2-201ENST00000390423 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
TRAV1-2-201ENST00000390423 LGR6Q9HBX8 967 aa8.67□□□□□ -1.02
TRAV1-2-201ENST00000390423 BCORQ6W2J9 1755 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 FZD9O00144 591 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 MAP2K2P36507 400 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 EPS15P42566 896 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 EIF5P55010 431 aaKnown RBP8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 AMOTQ4VCS5 1084 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 SOGA3Q5TF21 947 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 CIAPIN1Q6FI81 312 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 SLC51AQ86UW1 340 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 CNBD1Q8NA66 436 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 MASTLQ96GX5 879 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 SLC52A2Q9HAB3 445 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 PDZRN3Q9UPQ7 1066 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
TRAV1-2-201ENST00000390423 CA12O43570 354 aa8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 IARSP41252 1262 aaKnown RBP8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 SCNN1DP51172 638 aa8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 BRPF1P55201 1214 aaPredicted RBP8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 SAPCD2Q86UD0 394 aa8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 GPC2Q8N158 579 aa8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 TIMELESSQ9UNS1 1208 aa8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 GJA3Q9Y6H8 435 aa8.65□□□□□ -1.02
TRAV1-2-201ENST00000390423 SNED1Q8TER0 1413 aa8.64□□□□□ -1.03
TRAV1-2-201ENST00000390423 SYNE4Q8N205 404 aa8.64□□□□□ -1.03
TRAV1-2-201ENST00000390423 NPHP1O15259 732 aa8.63□□□□□ -1.03
TRAV1-2-201ENST00000390423 CAMTA2O94983 1202 aa8.63□□□□□ -1.03
TRAV1-2-201ENST00000390423 CELF2O95319 508 aaKnown RBP8.63□□□□□ -1.03
TRAV1-2-201ENST00000390423 ST5P78524 1137 aa8.63□□□□□ -1.03
TRAV1-2-201ENST00000390423 SULT6B1Q6IMI4 303 aa8.63□□□□□ -1.03
TRAV1-2-201ENST00000390423 A0A087WZG4 1122 aa8.62□□□□□ -1.03
TRAV1-2-201ENST00000390423 RNMTO43148 476 aaKnown RBP8.62□□□□□ -1.03
TRAV1-2-201ENST00000390423 SETDB2Q96T68 719 aa8.62□□□□□ -1.03
TRAV1-2-201ENST00000390423 GLIS2Q9BZE0 524 aaPredicted RBP8.62□□□□□ -1.03
TRAV1-2-201ENST00000390423 ZNF408Q9H9D4 720 aa8.62□□□□□ -1.03
TRAV1-2-201ENST00000390423 NPR1P16066 1061 aa8.61□□□□□ -1.03
TRAV1-2-201ENST00000390423 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
TRAV1-2-201ENST00000390423 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
TRAV1-2-201ENST00000390423 DLK2Q6UY11 383 aa8.61□□□□□ -1.03
TRAV1-2-201ENST00000390423 RTKN2Q8IZC4 609 aa8.61□□□□□ -1.03
TRAV1-2-201ENST00000390423 VSIG10Q8N0Z9 540 aa8.61□□□□□ -1.03
TRAV1-2-201ENST00000390423 SLC24A1O60721 1099 aa8.6□□□□□ -1.03
TRAV1-2-201ENST00000390423 STARD3NLO95772 234 aa8.6□□□□□ -1.03
TRAV1-2-201ENST00000390423 A1BGP04217 495 aa8.6□□□□□ -1.03
TRAV1-2-201ENST00000390423 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
TRAV1-2-201ENST00000390423 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
TRAV1-2-201ENST00000390423 USP50Q70EL3 339 aaPredicted RBP8.6□□□□□ -1.03
TRAV1-2-201ENST00000390423 ZNF496Q96IT1 587 aaPredicted RBP8.6□□□□□ -1.03
TRAV1-2-201ENST00000390423 KLRG2A4D1S0 409 aaPredicted RBP8.59□□□□□ -1.03
TRAV1-2-201ENST00000390423 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.03
TRAV1-2-201ENST00000390423 NBPF5PQ86XG9 351 aaPredicted RBP8.59□□□□□ -1.03
TRAV1-2-201ENST00000390423 JDP2Q8WYK2 163 aa8.59□□□□□ -1.03
TRAV1-2-201ENST00000390423 HHIPL1Q96JK4 782 aa8.59□□□□□ -1.03
TRAV1-2-201ENST00000390423 FAM177BA6PVY3 158 aa8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 FAM155AB1AL88 458 aaPredicted RBP8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 IL13P35225 146 aa8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 IL6STP40189 918 aaPredicted RBP8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 NOGQ13253 232 aa8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 DZIP3Q86Y13 1208 aaKnown RBP8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 PSMD1Q99460 953 aa8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 GPRC5DQ9NZD1 345 aa8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 HPS5Q9UPZ3 1129 aa8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 HEG1Q9ULI3 1381 aa8.58□□□□□ -1.04
TRAV1-2-201ENST00000390423 SHTN1A0MZ66 631 aa8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 TRPA1O75762 1119 aa8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 CDCA8Q53HL2 280 aa8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 LARGE2Q8N3Y3 721 aa8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 ADARB2Q9NS39 739 aaKnown RBP8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 RNF186Q9NXI6 227 aa8.57□□□□□ -1.04
TRAV1-2-201ENST00000390423 ABCC12Q96J65 1359 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms