RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 USP16Q9Y5T5 823 aa11.01□□□□□ -0.65
TRBV6-1-201ENST00000390353 BRCA1P38398 1863 aaKnown RBP11.01□□□□□ -0.65
TRBV6-1-201ENST00000390353 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
TRBV6-1-201ENST00000390353 IQCA1LA6NCM1 817 aa11□□□□□ -0.65
TRBV6-1-201ENST00000390353 CCDC93Q567U6 631 aa11□□□□□ -0.65
TRBV6-1-201ENST00000390353 NYXQ9GZU5 481 aa11□□□□□ -0.65
TRBV6-1-201ENST00000390353 NIP7Q9Y221 180 aaKnown RBP eCLIP11□□□□□ -0.65
TRBV6-1-201ENST00000390353 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
TRBV6-1-201ENST00000390353 KCNQ3O43525 872 aa10.99□□□□□ -0.65
TRBV6-1-201ENST00000390353 ALDH1B1P30837 517 aa10.99□□□□□ -0.65
TRBV6-1-201ENST00000390353 KIF6Q6ZMV9 814 aa10.99□□□□□ -0.65
TRBV6-1-201ENST00000390353 RTKN2Q8IZC4 609 aa10.99□□□□□ -0.65
TRBV6-1-201ENST00000390353 JMYQ8N9B5 988 aa10.99□□□□□ -0.65
TRBV6-1-201ENST00000390353 ZNF219Q9P2Y4 722 aaPredicted RBP10.99□□□□□ -0.65
TRBV6-1-201ENST00000390353 TNRC6CQ9HCJ0 1690 aaKnown RBP10.98□□□□□ -0.65
TRBV6-1-201ENST00000390353 KLRG2A4D1S0 409 aaPredicted RBP10.98□□□□□ -0.65
TRBV6-1-201ENST00000390353 ERVV-1B6SEH8 477 aa10.98□□□□□ -0.65
TRBV6-1-201ENST00000390353 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
TRBV6-1-201ENST00000390353 SCN7AQ01118 1682 aa10.98□□□□□ -0.65
TRBV6-1-201ENST00000390353 DCTN1Q14203 1278 aa10.97□□□□□ -0.65
TRBV6-1-201ENST00000390353 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
TRBV6-1-201ENST00000390353 CCDC24Q8N4L8 307 aa10.97□□□□□ -0.65
TRBV6-1-201ENST00000390353 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 PIP4K2AP48426 406 aaPredicted RBP10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 PRELPP51888 382 aa10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 FKBP4Q02790 459 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 LMOD3Q0VAK6 560 aa10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 NFE2L2Q16236 605 aa10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 CHADLQ6NUI6 762 aa10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 TMX4Q9H1E5 349 aaPredicted RBP10.96□□□□□ -0.65
TRBV6-1-201ENST00000390353 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
TRBV6-1-201ENST00000390353 JDP2Q8WYK2 163 aa10.95□□□□□ -0.66
TRBV6-1-201ENST00000390353 L3MBTL3Q96JM7 780 aaPredicted RBP10.95□□□□□ -0.66
TRBV6-1-201ENST00000390353 DLEC1Q9Y238 1755 aa10.95□□□□□ -0.66
TRBV6-1-201ENST00000390353 IBTKQ9P2D0 1353 aaPredicted RBP10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 MAP3K15Q6ZN16 1313 aa10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 AFDNP55196 1824 aaKnown RBP10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 RALBP1Q15311 655 aa10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 PNMA8AQ86V59 439 aaPredicted RBP10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 C7orf43Q8WVR3 580 aa10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 RPGRQ92834 1020 aaKnown RBP10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 BABAM1Q9NWV8 329 aa10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 MIS18AQ9NYP9 233 aa10.94□□□□□ -0.66
TRBV6-1-201ENST00000390353 SIPA1L3O60292 1781 aaPredicted RBP10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 FAM177BA6PVY3 158 aa10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 DDNO94850 711 aaPredicted RBP10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 EIF4A1P60842 406 aaKnown RBP10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 HTRA3P83110 453 aa10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 CRY2Q49AN0 593 aa10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 PARP10Q53GL7 1025 aa10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 PSMD1Q99460 953 aa10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 RRP7AQ9Y3A4 280 aaKnown RBP10.93□□□□□ -0.66
TRBV6-1-201ENST00000390353 WDR90Q96KV7 1748 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 RNF123Q5XPI4 1314 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 POTECB2RU33 542 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 PPP1R42Q7Z4L9 355 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 NGEFQ8N5V2 710 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 RBM17Q96I25 401 aaKnown RBP10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 PLEKHF1Q96S99 279 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 TSPYL4Q9UJ04 414 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 HACL1Q9UJ83 578 aa10.92□□□□□ -0.66
TRBV6-1-201ENST00000390353 MYL6BP14649 208 aa10.91□□□□□ -0.66
TRBV6-1-201ENST00000390353 IARSP41252 1262 aaKnown RBP10.91□□□□□ -0.66
TRBV6-1-201ENST00000390353 HLFQ16534 295 aa10.91□□□□□ -0.66
TRBV6-1-201ENST00000390353 HSP90AB3PQ58FF7 597 aa10.91□□□□□ -0.66
TRBV6-1-201ENST00000390353 GPC2Q8N158 579 aa10.91□□□□□ -0.66
TRBV6-1-201ENST00000390353 ZNF277Q9NRM2 450 aaPredicted RBP10.91□□□□□ -0.66
TRBV6-1-201ENST00000390353 RIC1Q4ADV7 1423 aa10.91□□□□□ -0.66
TRBV6-1-201ENST00000390353 SBF1O95248 1867 aa10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 LMOD1P29536 600 aaPredicted RBP10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 HOXA10P31260 410 aaPredicted RBP10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 RIPK4P57078 832 aa10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 GIGYF2Q6Y7W6 1299 aaKnown RBP10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 SYNE4Q8N205 404 aa10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 CRAMP1Q96RY5 1269 aa10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 ZBTB3Q9H5J0 574 aa10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 TAF1DQ9H5J8 278 aaPredicted RBP10.9□□□□□ -0.66
TRBV6-1-201ENST00000390353 TIAM2Q8IVF5 1701 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 VIRMAQ69YN4 1812 aaKnown RBP10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 FZD9O00144 591 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 GPTP24298 496 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 EPHX2P34913 555 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 EAPPQ56P03 285 aaPredicted RBP10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 NLRP3Q96P20 1036 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 UTP14AQ9BVJ6 771 aaKnown RBP10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 VPS33BQ9H267 617 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 CLEC11AQ9Y240 323 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 BCORQ6W2J9 1755 aa10.89□□□□□ -0.67
TRBV6-1-201ENST00000390353 TMEM88BA6NKF7 163 aa10.88□□□□□ -0.67
TRBV6-1-201ENST00000390353 COL11A2P13942 1736 aaPredicted RBP10.88□□□□□ -0.67
TRBV6-1-201ENST00000390353 TTLL7Q6ZT98 887 aa10.88□□□□□ -0.67
TRBV6-1-201ENST00000390353 ZNF34Q8IZ26 560 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms