RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 PRDM10Q9NQV6 1147 aa28.88■■■□□ 2.21
CNEP1R1-201ENST00000389134 PASKQ96RG2 1323 aa28.87■■■□□ 2.21
CNEP1R1-201ENST00000389134 BCORQ6W2J9 1755 aa28.86■■■□□ 2.21
CNEP1R1-201ENST00000389134 FOXN1O15353 648 aa28.86■■■□□ 2.21
CNEP1R1-201ENST00000389134 CAMTA2O94983 1202 aa28.86■■■□□ 2.21
CNEP1R1-201ENST00000389134 L3MBTL3Q96JM7 780 aaPredicted RBP28.86■■■□□ 2.21
CNEP1R1-201ENST00000389134 GNAT3A8MTJ3 354 aa28.85■■■□□ 2.21
CNEP1R1-201ENST00000389134 IL17REQ8NFR9 667 aa28.85■■■□□ 2.21
CNEP1R1-201ENST00000389134 FMNL2Q96PY5 1086 aa28.85■■■□□ 2.21
CNEP1R1-201ENST00000389134 GAS2L2Q8NHY3 880 aa28.84■■■□□ 2.21
CNEP1R1-201ENST00000389134 TAF1DQ9H5J8 278 aaPredicted RBP28.84■■■□□ 2.21
CNEP1R1-201ENST00000389134 A1BGP04217 495 aa28.83■■■□□ 2.21
CNEP1R1-201ENST00000389134 AIDAQ96BJ3 306 aa28.83■■■□□ 2.21
CNEP1R1-201ENST00000389134 TMEM88BA6NKF7 163 aa28.82■■■□□ 2.2
CNEP1R1-201ENST00000389134 CTCFP49711 727 aaPredicted RBP28.82■■■□□ 2.2
CNEP1R1-201ENST00000389134 DZIP3Q86Y13 1208 aaKnown RBP28.81■■■□□ 2.2
CNEP1R1-201ENST00000389134 C7orf43Q8WVR3 580 aa28.81■■■□□ 2.2
CNEP1R1-201ENST00000389134 CCDC93Q567U6 631 aa28.8■■■□□ 2.2
CNEP1R1-201ENST00000389134 VEGFBP49765 207 aa28.79■■■□□ 2.2
CNEP1R1-201ENST00000389134 CLEC4GQ6UXB4 293 aa28.79■■■□□ 2.2
CNEP1R1-201ENST00000389134 ITGBL1O95965 494 aaPredicted RBP28.78■■■□□ 2.2
CNEP1R1-201ENST00000389134 PCGF6Q9BYE7 350 aa28.78■■■□□ 2.2
CNEP1R1-201ENST00000389134 NPR1P16066 1061 aa28.77■■■□□ 2.2
CNEP1R1-201ENST00000389134 FKBP4Q02790 459 aaKnown RBP eCLIP28.77■■■□□ 2.2
CNEP1R1-201ENST00000389134 NBPF5PQ86XG9 351 aaPredicted RBP28.77■■■□□ 2.2
CNEP1R1-201ENST00000389134 EAPPQ56P03 285 aaPredicted RBP28.76■■■□□ 2.19
CNEP1R1-201ENST00000389134 HACL1Q9UJ83 578 aa28.76■■■□□ 2.19
CNEP1R1-201ENST00000389134 U2SURPO15042 1029 aaKnown RBP28.75■■■□□ 2.19
CNEP1R1-201ENST00000389134 WBP1LQ9NX94 342 aa28.75■■■□□ 2.19
CNEP1R1-201ENST00000389134 CLEC11AQ9Y240 323 aa28.75■■■□□ 2.19
CNEP1R1-201ENST00000389134 ZNF652Q9Y2D9 606 aa28.75■■■□□ 2.19
CNEP1R1-201ENST00000389134 CEMIPQ8WUJ3 1361 aa28.75■■■□□ 2.19
CNEP1R1-201ENST00000389134 BTBD11A6QL63 1104 aa28.74■■■□□ 2.19
CNEP1R1-201ENST00000389134 PER1O15534 1290 aaPredicted RBP28.74■■■□□ 2.19
CNEP1R1-201ENST00000389134 CC2D1BQ5T0F9 858 aaKnown RBP28.74■■■□□ 2.19
CNEP1R1-201ENST00000389134 ADAMTSL1Q8N6G6 1762 aa28.74■■■□□ 2.19
CNEP1R1-201ENST00000389134 KLRG2A4D1S0 409 aaPredicted RBP28.73■■■□□ 2.19
CNEP1R1-201ENST00000389134 RTKN2Q8IZC4 609 aa28.73■■■□□ 2.19
CNEP1R1-201ENST00000389134 ZNF277Q9NRM2 450 aaPredicted RBP28.73■■■□□ 2.19
CNEP1R1-201ENST00000389134 COL3A1P02461 1466 aaPredicted RBP28.72■■■□□ 2.19
CNEP1R1-201ENST00000389134 ZNF541Q9H0D2 1346 aa28.72■■■□□ 2.19
CNEP1R1-201ENST00000389134 EPHX2P34913 555 aa28.72■■■□□ 2.19
CNEP1R1-201ENST00000389134 PNMA8AQ86V59 439 aaPredicted RBP28.72■■■□□ 2.19
CNEP1R1-201ENST00000389134 USP16Q9Y5T5 823 aa28.72■■■□□ 2.19
CNEP1R1-201ENST00000389134 KIF7Q2M1P5 1343 aa28.71■■■□□ 2.19
CNEP1R1-201ENST00000389134 KCNQ3O43525 872 aa28.71■■■□□ 2.19
CNEP1R1-201ENST00000389134 TPTE2Q6XPS3 522 aa28.71■■■□□ 2.19
CNEP1R1-201ENST00000389134 LBX1P52954 281 aa28.7■■■□□ 2.18
CNEP1R1-201ENST00000389134 RASSF10A6NK89 507 aa28.69■■■□□ 2.18
CNEP1R1-201ENST00000389134 RGL2O15211 777 aa28.69■■■□□ 2.18
CNEP1R1-201ENST00000389134 DEFB115Q30KQ5 88 aa28.69■■■□□ 2.18
CNEP1R1-201ENST00000389134 PIP4K2AP48426 406 aaPredicted RBP28.68■■■□□ 2.18
CNEP1R1-201ENST00000389134 CNTROBQ8N137 903 aa28.68■■■□□ 2.18
CNEP1R1-201ENST00000389134 FZD9O00144 591 aa28.67■■■□□ 2.18
CNEP1R1-201ENST00000389134 ALDH1B1P30837 517 aa28.67■■■□□ 2.18
CNEP1R1-201ENST00000389134 SNRPA1P09661 255 aaKnown RBP28.66■■■□□ 2.18
CNEP1R1-201ENST00000389134 IARSP41252 1262 aaKnown RBP28.66■■■□□ 2.18
CNEP1R1-201ENST00000389134 NIP7Q9Y221 180 aaKnown RBP eCLIP28.66■■■□□ 2.18
CNEP1R1-201ENST00000389134 MAP2K1Q02750 393 aaPredicted RBP28.65■■■□□ 2.18
CNEP1R1-201ENST00000389134 MAP1SQ66K74 1059 aaPredicted RBP28.65■■■□□ 2.18
CNEP1R1-201ENST00000389134 OLFM4Q6UX06 510 aa28.65■■■□□ 2.18
CNEP1R1-201ENST00000389134 GPC2Q8N158 579 aa28.65■■■□□ 2.18
CNEP1R1-201ENST00000389134 SYNE4Q8N205 404 aa28.65■■■□□ 2.18
CNEP1R1-201ENST00000389134 RNF123Q5XPI4 1314 aa28.65■■■□□ 2.18
CNEP1R1-201ENST00000389134 NPC1L1Q9UHC9 1359 aa28.64■■■□□ 2.18
CNEP1R1-201ENST00000389134 PHACTR3Q96KR7 559 aa28.64■■■□□ 2.18
CNEP1R1-201ENST00000389134 PRAMEF22A3QJZ6 481 aa28.63■■■□□ 2.17
CNEP1R1-201ENST00000389134 HSPA8P11142 646 aaKnown RBP28.63■■■□□ 2.17
CNEP1R1-201ENST00000389134 TRPM7Q96QT4 1865 aa28.63■■■□□ 2.17
CNEP1R1-201ENST00000389134 WDR33Q9C0J8 1336 aaKnown RBP28.63■■■□□ 2.17
CNEP1R1-201ENST00000389134 JDP2Q8WYK2 163 aa28.62■■■□□ 2.17
CNEP1R1-201ENST00000389134 PRKAR2BP31323 418 aa28.61■■■□□ 2.17
CNEP1R1-201ENST00000389134 PSMD1Q99460 953 aa28.61■■■□□ 2.17
CNEP1R1-201ENST00000389134 ABT1Q9ULW3 272 aaKnown RBP28.61■■■□□ 2.17
CNEP1R1-201ENST00000389134 GTF2E1P29083 439 aaPredicted RBP28.6■■■□□ 2.17
CNEP1R1-201ENST00000389134 ABHD8Q96I13 439 aa28.6■■■□□ 2.17
CNEP1R1-201ENST00000389134 FAM177BA6PVY3 158 aa28.59■■■□□ 2.17
CNEP1R1-201ENST00000389134 NBPF26B4DH59 902 aa28.59■■■□□ 2.17
CNEP1R1-201ENST00000389134 NBPF10Q6P3W6 841 aaKnown RBP28.59■■■□□ 2.17
CNEP1R1-201ENST00000389134 NBPF15Q8N660 670 aa28.59■■■□□ 2.17
CNEP1R1-201ENST00000389134 RSPH6AQ9H0K4 717 aa28.59■■■□□ 2.17
CNEP1R1-201ENST00000389134 NUP98P52948 1817 aa28.59■■■□□ 2.17
CNEP1R1-201ENST00000389134 CC2D2BQ6DHV5 1058 aa28.58■■■□□ 2.17
CNEP1R1-201ENST00000389134 RTF1Q92541 710 aaKnown RBP28.58■■■□□ 2.17
CNEP1R1-201ENST00000389134 DDX21Q9NR30 783 aaKnown RBP eCLIP28.58■■■□□ 2.17
CNEP1R1-201ENST00000389134 EIF6P56537 245 aaKnown RBP28.57■■■□□ 2.16
CNEP1R1-201ENST00000389134 LMOD1P29536 600 aaPredicted RBP28.56■■■□□ 2.16
CNEP1R1-201ENST00000389134 SNED1Q8TER0 1413 aa28.55■■■□□ 2.16
CNEP1R1-201ENST00000389134 CNGB1Q14028 1251 aaPredicted RBP28.55■■■□□ 2.16
CNEP1R1-201ENST00000389134 CFAP53Q96M91 514 aa28.55■■■□□ 2.16
CNEP1R1-201ENST00000389134 NYXQ9GZU5 481 aa28.55■■■□□ 2.16
CNEP1R1-201ENST00000389134 HLFQ16534 295 aa28.54■■■□□ 2.16
CNEP1R1-201ENST00000389134 CRY2Q49AN0 593 aa28.54■■■□□ 2.16
CNEP1R1-201ENST00000389134 MCM10Q7L590 875 aa28.54■■■□□ 2.16
CNEP1R1-201ENST00000389134 GJA3Q9Y6H8 435 aa28.54■■■□□ 2.16
CNEP1R1-201ENST00000389134 SLC34A2O95436 690 aa28.53■■■□□ 2.16
CNEP1R1-201ENST00000389134 ECE1P42892 770 aa28.53■■■□□ 2.16
CNEP1R1-201ENST00000389134 GRIPAP1Q4V328 841 aa28.53■■■□□ 2.16
CNEP1R1-201ENST00000389134 BEGAINQ9BUH8 593 aa28.53■■■□□ 2.16
CNEP1R1-201ENST00000389134 NUDCQ9Y266 331 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms