RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 KDM6AO15550 1401 aaPredicted RBP18.13■□□□□ 0.49
SCFD2-201ENST00000388940 TATP17735 454 aaPredicted RBP18.13■□□□□ 0.49
SCFD2-201ENST00000388940 CWF19L2Q2TBE0 894 aaKnown RBP18.13■□□□□ 0.49
SCFD2-201ENST00000388940 LSG1Q9H089 658 aaKnown RBP18.13■□□□□ 0.49
SCFD2-201ENST00000388940 MAP4K4O95819 1239 aaPredicted RBP18.13■□□□□ 0.49
SCFD2-201ENST00000388940 PHKG2P15735 406 aa18.13■□□□□ 0.49
SCFD2-201ENST00000388940 BRD1O95696 1058 aa18.12■□□□□ 0.49
SCFD2-201ENST00000388940 ATF3P18847 181 aa18.12■□□□□ 0.49
SCFD2-201ENST00000388940 ZNF445P59923 1031 aa18.12■□□□□ 0.49
SCFD2-201ENST00000388940 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
SCFD2-201ENST00000388940 ECHDC1Q9NTX5 307 aa18.12■□□□□ 0.49
SCFD2-201ENST00000388940 MRC1P22897 1456 aa18.11■□□□□ 0.49
SCFD2-201ENST00000388940 LARP1Q6PKG0 1096 aaKnown RBP18.11■□□□□ 0.49
SCFD2-201ENST00000388940 RUFY2Q8WXA3 655 aa18.11■□□□□ 0.49
SCFD2-201ENST00000388940 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
SCFD2-201ENST00000388940 SUCLG2Q96I99 432 aa18.11■□□□□ 0.49
SCFD2-201ENST00000388940 NLRP2Q9NX02 1062 aa18.11■□□□□ 0.49
SCFD2-201ENST00000388940 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
SCFD2-201ENST00000388940 PKD1L3Q7Z443 1732 aa18.1■□□□□ 0.49
SCFD2-201ENST00000388940 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
SCFD2-201ENST00000388940 KIAA1211Q6ZU35 1233 aa18.1■□□□□ 0.49
SCFD2-201ENST00000388940 SNX14Q9Y5W7 946 aa18.1■□□□□ 0.49
SCFD2-201ENST00000388940 MEGF6O75095 1541 aa18.1■□□□□ 0.49
SCFD2-201ENST00000388940 TMEM94Q12767 1356 aa18.09■□□□□ 0.49
SCFD2-201ENST00000388940 IFIT2P09913 472 aaKnown RBP18.09■□□□□ 0.49
SCFD2-201ENST00000388940 IGKV5-2P06315 115 aa18.08■□□□□ 0.49
SCFD2-201ENST00000388940 UPF3BQ9BZI7 483 aaKnown RBP18.08■□□□□ 0.49
SCFD2-201ENST00000388940 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.49
SCFD2-201ENST00000388940 PRPF40AO75400 957 aaKnown RBP18.08■□□□□ 0.48
SCFD2-201ENST00000388940 SLC39A6Q13433 755 aa18.08■□□□□ 0.48
SCFD2-201ENST00000388940 RIC3Q7Z5B4 369 aa18.08■□□□□ 0.48
SCFD2-201ENST00000388940 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
SCFD2-201ENST00000388940 EVI5LQ96CN4 794 aa18.08■□□□□ 0.48
SCFD2-201ENST00000388940 TTC14Q96N46 770 aa18.08■□□□□ 0.48
SCFD2-201ENST00000388940 BICC1Q9H694 974 aaKnown RBP18.08■□□□□ 0.48
SCFD2-201ENST00000388940 RRAGDQ9NQL2 400 aaPredicted RBP18.08■□□□□ 0.48
SCFD2-201ENST00000388940 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
SCFD2-201ENST00000388940 AIMP1Q12904 312 aaKnown RBP18.07■□□□□ 0.48
SCFD2-201ENST00000388940 CWC27Q6UX04 472 aaKnown RBP18.07■□□□□ 0.48
SCFD2-201ENST00000388940 DCAF5Q96JK2 942 aa18.07■□□□□ 0.48
SCFD2-201ENST00000388940 DIAPH3Q9NSV4 1193 aa18.07■□□□□ 0.48
SCFD2-201ENST00000388940 TNS3Q68CZ2 1445 aa18.07■□□□□ 0.48
SCFD2-201ENST00000388940 SASH1O94885 1247 aa18.07■□□□□ 0.48
SCFD2-201ENST00000388940 G3BP1Q13283 466 aaKnown RBP eCLIP18.07■□□□□ 0.48
SCFD2-201ENST00000388940 KCNB2Q92953 911 aa18.07■□□□□ 0.48
SCFD2-201ENST00000388940 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
SCFD2-201ENST00000388940 NEURL1BA8MQ27 555 aa18.06■□□□□ 0.48
SCFD2-201ENST00000388940 ZSCAN23Q3MJ62 389 aa18.06■□□□□ 0.48
SCFD2-201ENST00000388940 CAVIN1Q6NZI2 390 aaKnown RBP18.06■□□□□ 0.48
SCFD2-201ENST00000388940 LRP10Q7Z4F1 713 aa18.06■□□□□ 0.48
SCFD2-201ENST00000388940 AACSQ86V21 672 aa18.06■□□□□ 0.48
SCFD2-201ENST00000388940 GPT2Q8TD30 523 aa18.06■□□□□ 0.48
SCFD2-201ENST00000388940 HIP1O00291 1037 aa18.05■□□□□ 0.48
SCFD2-201ENST00000388940 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
SCFD2-201ENST00000388940 GCKRQ14397 625 aa18.05■□□□□ 0.48
SCFD2-201ENST00000388940 CADPS2Q86UW7 1296 aa18.05■□□□□ 0.48
SCFD2-201ENST00000388940 XAGE3Q8WTP9 111 aa18.05■□□□□ 0.48
SCFD2-201ENST00000388940 ZNF496Q96IT1 587 aaPredicted RBP18.05■□□□□ 0.48
SCFD2-201ENST00000388940 CPDO75976 1380 aa18.05■□□□□ 0.48
SCFD2-201ENST00000388940 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
SCFD2-201ENST00000388940 COL15A1P39059 1388 aa18.04■□□□□ 0.48
SCFD2-201ENST00000388940 COPS6Q7L5N1 327 aa18.04■□□□□ 0.48
SCFD2-201ENST00000388940 RASEFQ8IZ41 740 aa18.04■□□□□ 0.48
SCFD2-201ENST00000388940 MBD3O95983 291 aa18.04■□□□□ 0.48
SCFD2-201ENST00000388940 TM6SF1Q9BZW5 370 aa18.04■□□□□ 0.48
SCFD2-201ENST00000388940 SNRKQ9NRH2 765 aa18.04■□□□□ 0.48
SCFD2-201ENST00000388940 CYP27B1O15528 508 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 CSB-PGBD3P0DP91 1061 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 NCLP19338 710 aaKnown RBP18.03■□□□□ 0.48
SCFD2-201ENST00000388940 NOL8Q76FK4 1167 aaKnown RBP18.03■□□□□ 0.48
SCFD2-201ENST00000388940 EAF2Q96CJ1 260 aaPredicted RBP18.03■□□□□ 0.48
SCFD2-201ENST00000388940 SPATA31A3Q5VYP0 1347 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
SCFD2-201ENST00000388940 LAMB4A4D0S4 1761 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 MYL6BP14649 208 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 ANKRD13DQ6ZTN6 518 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 DDX17Q92841 729 aaKnown RBP18.03■□□□□ 0.48
SCFD2-201ENST00000388940 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 LIMCH1Q9UPQ0 1083 aa18.03■□□□□ 0.48
SCFD2-201ENST00000388940 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.48
SCFD2-201ENST00000388940 GLIPR1L2Q4G1C9 344 aa18.02■□□□□ 0.48
SCFD2-201ENST00000388940 TTC5Q8N0Z6 440 aa18.02■□□□□ 0.48
SCFD2-201ENST00000388940 PPP1R9BQ96SB3 815 aa18.02■□□□□ 0.48
SCFD2-201ENST00000388940 AFDNP55196 1824 aaKnown RBP18.02■□□□□ 0.48
SCFD2-201ENST00000388940 AK2P54819 239 aa18.02■□□□□ 0.47
SCFD2-201ENST00000388940 CCDC173Q0VFZ6 552 aa18.02■□□□□ 0.47
SCFD2-201ENST00000388940 MYD88Q99836 296 aa18.02■□□□□ 0.47
SCFD2-201ENST00000388940 USP16Q9Y5T5 823 aa18.02■□□□□ 0.47
SCFD2-201ENST00000388940 ARFGEF2Q9Y6D5 1785 aa18.01■□□□□ 0.47
SCFD2-201ENST00000388940 PTH1RQ03431 593 aa18.01■□□□□ 0.47
SCFD2-201ENST00000388940 CLCN1P35523 988 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 COPRSQ9NQ92 184 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 GLI3P10071 1580 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 NECTIN1Q15223 517 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 VPS53Q5VIR6 699 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 RUFY3Q7L099 469 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 CABLES1Q8TDN4 633 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 ZSWIM6Q9HCJ5 1215 aa18■□□□□ 0.47
SCFD2-201ENST00000388940 ZSCAN21Q9Y5A6 473 aaPredicted RBP18■□□□□ 0.47
SCFD2-201ENST00000388940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms