RNA–Protein interactions for RNA: ENST00000380876.4

EIF3CL-201, Transcript of eukaryotic translation initiation factor 3 subunit C like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3CL, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3CL-201ENST00000380876 ERCC4Q92889 916 aaPredicted RBP16.06■□□□□ 0.16
EIF3CL-201ENST00000380876 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
EIF3CL-201ENST00000380876 ST7Q9NRC1 585 aa16.06■□□□□ 0.16
EIF3CL-201ENST00000380876 ATP6V1DQ9Y5K8 247 aa16.06■□□□□ 0.16
EIF3CL-201ENST00000380876 MYO5BQ9ULV0 1848 aa16.06■□□□□ 0.16
EIF3CL-201ENST00000380876 FAM200AQ8TCP9 573 aa16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 CACTINQ8WUQ7 758 aaKnown RBP16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 STAP2Q9UGK3 403 aa16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 TAF6LQ9Y6J9 622 aa16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 CCDC61Q9Y6R9 512 aa16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 PIK3C2BO00750 1634 aa16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
EIF3CL-201ENST00000380876 TPCN1Q9ULQ1 816 aa16.04■□□□□ 0.16
EIF3CL-201ENST00000380876 ARAP3Q8WWN8 1544 aa16.04■□□□□ 0.16
EIF3CL-201ENST00000380876 FILIP1Q7Z7B0 1213 aa16.04■□□□□ 0.16
EIF3CL-201ENST00000380876 CCDC112Q8NEF3 446 aa16.04■□□□□ 0.16
EIF3CL-201ENST00000380876 BICD2Q8TD16 824 aa16.04■□□□□ 0.16
EIF3CL-201ENST00000380876 PA2G4Q9UQ80 394 aaKnown RBP16.04■□□□□ 0.16
EIF3CL-201ENST00000380876 CPSF1Q10570 1443 aaKnown RBP16.04■□□□□ 0.16
EIF3CL-201ENST00000380876 CDC42BPGQ6DT37 1551 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 KIF20AO95235 890 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 ZSCAN25Q6NSZ9 544 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 CNTROBQ8N137 903 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 CLIP2Q9UDT6 1046 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 NR1I2O75469 434 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 CTIFO43310 598 aaKnown RBP16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 CTNNA3Q9UI47 895 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 CYP46A1Q9Y6A2 500 aa16.03■□□□□ 0.16
EIF3CL-201ENST00000380876 ZBTB9Q96C00 473 aa16.02■□□□□ 0.16
EIF3CL-201ENST00000380876 FAM227BQ96M60 508 aa16.02■□□□□ 0.16
EIF3CL-201ENST00000380876 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
EIF3CL-201ENST00000380876 CDK12Q9NYV4 1490 aaPredicted RBP16.02■□□□□ 0.16
EIF3CL-201ENST00000380876 RAB11FIP3O75154 756 aa16.02■□□□□ 0.15
EIF3CL-201ENST00000380876 KRT85P78386 507 aa16.02■□□□□ 0.15
EIF3CL-201ENST00000380876 CCDC30Q5VVM6 783 aa16.02■□□□□ 0.15
EIF3CL-201ENST00000380876 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
EIF3CL-201ENST00000380876 ZNF165P49910 485 aa16.01■□□□□ 0.15
EIF3CL-201ENST00000380876 LARP1Q6PKG0 1096 aaKnown RBP16.01■□□□□ 0.15
EIF3CL-201ENST00000380876 USHBP1Q8N6Y0 703 aa16.01■□□□□ 0.15
EIF3CL-201ENST00000380876 SPATA32Q96LK8 384 aa16.01■□□□□ 0.15
EIF3CL-201ENST00000380876 CRB1P82279 1406 aa16.01■□□□□ 0.15
EIF3CL-201ENST00000380876 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
EIF3CL-201ENST00000380876 ZNF75DP51815 510 aa16■□□□□ 0.15
EIF3CL-201ENST00000380876 OGFRQ9NZT2 677 aa16■□□□□ 0.15
EIF3CL-201ENST00000380876 ZNF215Q9UL58 517 aaPredicted RBP16■□□□□ 0.15
EIF3CL-201ENST00000380876 USP16Q9Y5T5 823 aa16■□□□□ 0.15
EIF3CL-201ENST00000380876 TAF7Q15545 349 aaPredicted RBP16■□□□□ 0.15
EIF3CL-201ENST00000380876 HDGFL1Q5TGJ6 251 aa16■□□□□ 0.15
EIF3CL-201ENST00000380876 HECW2Q9P2P5 1572 aa15.99■□□□□ 0.15
EIF3CL-201ENST00000380876 FTOQ9C0B1 505 aaKnown RBP eCLIP15.99■□□□□ 0.15
EIF3CL-201ENST00000380876 JAK2O60674 1132 aa15.99■□□□□ 0.15
EIF3CL-201ENST00000380876 AMPHP49418 695 aa15.99■□□□□ 0.15
EIF3CL-201ENST00000380876 CEP135Q66GS9 1140 aa15.99■□□□□ 0.15
EIF3CL-201ENST00000380876 CCDC9Q9Y3X0 531 aaKnown RBP15.99■□□□□ 0.15
EIF3CL-201ENST00000380876 ALKQ9UM73 1620 aa15.99■□□□□ 0.15
EIF3CL-201ENST00000380876 SMTNL1A8MU46 457 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 EYA1Q99502 592 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 RBM8AQ9Y5S9 174 aaKnown RBP15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 FGD1P98174 961 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 ELF2Q15723 593 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 CCDC8Q9H0W5 538 aaPredicted RBP15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 ACEP12821 1306 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 ATP7BP35670 1465 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 SSH3Q8TE77 659 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 NDUFB9Q9Y6M9 179 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 TTC21BQ7Z4L5 1316 aa15.98■□□□□ 0.15
EIF3CL-201ENST00000380876 SSH2Q76I76 1423 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 CHGBP05060 677 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 TPM3P06753 285 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 METP08581 1390 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 PLPPR3Q6T4P5 718 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 KIF1BPQ96EK5 621 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 EDC3Q96F86 508 aaKnown RBP15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 SIL1Q9H173 461 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
EIF3CL-201ENST00000380876 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
EIF3CL-201ENST00000380876 C11orf57Q6ZUT1 292 aaPredicted RBP15.96■□□□□ 0.15
EIF3CL-201ENST00000380876 PGBD1Q96JS3 809 aa15.96■□□□□ 0.15
EIF3CL-201ENST00000380876 SLFN14P0C7P3 912 aa15.96■□□□□ 0.15
EIF3CL-201ENST00000380876 CREB3L3Q68CJ9 461 aa15.96■□□□□ 0.15
EIF3CL-201ENST00000380876 ZKSCAN1P17029 563 aaPredicted RBP15.96■□□□□ 0.14
EIF3CL-201ENST00000380876 GORABQ5T7V8 394 aa15.96■□□□□ 0.14
EIF3CL-201ENST00000380876 VPS53Q5VIR6 699 aa15.96■□□□□ 0.14
EIF3CL-201ENST00000380876 KIF18AQ8NI77 898 aa15.96■□□□□ 0.14
EIF3CL-201ENST00000380876 LEO1Q8WVC0 666 aaPredicted RBP15.96■□□□□ 0.14
EIF3CL-201ENST00000380876 FEZ1Q99689 392 aa15.96■□□□□ 0.14
EIF3CL-201ENST00000380876 DDX41Q9UJV9 622 aaKnown RBP15.96■□□□□ 0.14
EIF3CL-201ENST00000380876 IL17REQ8NFR9 667 aa15.95■□□□□ 0.14
EIF3CL-201ENST00000380876 BOLA2Q9H3K6 86 aa15.95■□□□□ 0.14
EIF3CL-201ENST00000380876 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
EIF3CL-201ENST00000380876 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
EIF3CL-201ENST00000380876 GOLGA6L19H0YKK7 550 aa15.95■□□□□ 0.14
EIF3CL-201ENST00000380876 NMIQ13287 307 aaPredicted RBP15.95■□□□□ 0.14
EIF3CL-201ENST00000380876 LRRN4CLQ8ND94 238 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms