RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 KIF2CQ99661 725 aa23.71■■□□□ 1.39
GMDS-201ENST00000380805 NBR1Q14596 966 aa23.7■■□□□ 1.39
GMDS-201ENST00000380805 CWF19L2Q2TBE0 894 aaKnown RBP23.7■■□□□ 1.39
GMDS-201ENST00000380805 XAGE3Q8WTP9 111 aa23.7■■□□□ 1.39
GMDS-201ENST00000380805 C9orf78Q9NZ63 289 aaPredicted RBP23.7■■□□□ 1.39
GMDS-201ENST00000380805 COL15A1P39059 1388 aa23.7■■□□□ 1.38
GMDS-201ENST00000380805 IGKV5-2P06315 115 aa23.7■■□□□ 1.38
GMDS-201ENST00000380805 KIF1BPQ96EK5 621 aa23.7■■□□□ 1.38
GMDS-201ENST00000380805 METTL22Q9BUU2 404 aaPredicted RBP23.7■■□□□ 1.38
GMDS-201ENST00000380805 SURF6O75683 361 aaKnown RBP23.69■■□□□ 1.38
GMDS-201ENST00000380805 CASC1Q6TDU7 716 aa23.69■■□□□ 1.38
GMDS-201ENST00000380805 RHPN1Q8TCX5 695 aa23.69■■□□□ 1.38
GMDS-201ENST00000380805 ANTXR1Q9H6X2 564 aa23.69■■□□□ 1.38
GMDS-201ENST00000380805 RGS17Q9UGC6 210 aaPredicted RBP23.69■■□□□ 1.38
GMDS-201ENST00000380805 COPS6Q7L5N1 327 aa23.68■■□□□ 1.38
GMDS-201ENST00000380805 RIC3Q7Z5B4 369 aa23.68■■□□□ 1.38
GMDS-201ENST00000380805 NEURL1BA8MQ27 555 aa23.67■■□□□ 1.38
GMDS-201ENST00000380805 ITGB4P16144 1822 aa23.67■■□□□ 1.38
GMDS-201ENST00000380805 MYL6BP14649 208 aa23.67■■□□□ 1.38
GMDS-201ENST00000380805 NEXNQ0ZGT2 675 aa23.67■■□□□ 1.38
GMDS-201ENST00000380805 AIMP1Q12904 312 aaKnown RBP23.67■■□□□ 1.38
GMDS-201ENST00000380805 KAZALD1Q96I82 304 aa23.67■■□□□ 1.38
GMDS-201ENST00000380805 AK9Q5TCS8 1911 aa23.67■■□□□ 1.38
GMDS-201ENST00000380805 ANKRD13DQ6ZTN6 518 aa23.66■■□□□ 1.38
GMDS-201ENST00000380805 USP42Q9H9J4 1324 aaKnown RBP23.66■■□□□ 1.38
GMDS-201ENST00000380805 GCKRQ14397 625 aa23.64■■□□□ 1.38
GMDS-201ENST00000380805 USP26Q9BXU7 913 aa23.64■■□□□ 1.38
GMDS-201ENST00000380805 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.64■■□□□ 1.38
GMDS-201ENST00000380805 VPS72Q15906 364 aa23.64■■□□□ 1.37
GMDS-201ENST00000380805 SUCLG2Q96I99 432 aa23.64■■□□□ 1.37
GMDS-201ENST00000380805 QTRT2Q9H974 415 aaKnown RBP23.64■■□□□ 1.37
GMDS-201ENST00000380805 RTL5Q5HYW3 569 aaPredicted RBP23.63■■□□□ 1.37
GMDS-201ENST00000380805 CCDC9Q9Y3X0 531 aaKnown RBP23.63■■□□□ 1.37
GMDS-201ENST00000380805 ERC1Q8IUD2 1116 aa23.62■■□□□ 1.37
GMDS-201ENST00000380805 HSCBQ8IWL3 235 aa23.62■■□□□ 1.37
GMDS-201ENST00000380805 PLBD2Q8NHP8 589 aa23.62■■□□□ 1.37
GMDS-201ENST00000380805 SPATA31A5Q5VU36 1347 aa23.62■■□□□ 1.37
GMDS-201ENST00000380805 SPATA31A7Q8IWB4 1347 aa23.62■■□□□ 1.37
GMDS-201ENST00000380805 REC8O95072 547 aa23.62■■□□□ 1.37
GMDS-201ENST00000380805 DDX54Q8TDD1 881 aaKnown RBP23.62■■□□□ 1.37
GMDS-201ENST00000380805 IL1RAPL2Q9NP60 686 aa23.62■■□□□ 1.37
GMDS-201ENST00000380805 TJP1Q07157 1748 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 ATRNO75882 1429 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 NBPF26B4DH59 902 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 ERC2O15083 957 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 NFKBIBQ15653 356 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 NBPF14Q5TI25 921 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 ZNF772Q68DY9 489 aaPredicted RBP23.61■■□□□ 1.37
GMDS-201ENST00000380805 NBPF10Q6P3W6 841 aaKnown RBP23.61■■□□□ 1.37
GMDS-201ENST00000380805 NBPF15Q8N660 670 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 MYD88Q99836 296 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 TRPC5Q9UL62 973 aaPredicted RBP23.61■■□□□ 1.37
GMDS-201ENST00000380805 SPATA31A1Q5TZJ5 1347 aa23.61■■□□□ 1.37
GMDS-201ENST00000380805 PI4K2BQ8TCG2 481 aa23.6■■□□□ 1.37
GMDS-201ENST00000380805 BCL11AQ9H165 835 aa23.6■■□□□ 1.37
GMDS-201ENST00000380805 BICC1Q9H694 974 aaKnown RBP23.6■■□□□ 1.37
GMDS-201ENST00000380805 TTC41PQ6P2S7 1318 aa23.59■■□□□ 1.37
GMDS-201ENST00000380805 TSHZ3Q63HK5 1081 aa23.59■■□□□ 1.37
GMDS-201ENST00000380805 POTEAQ6S8J7 498 aa23.59■■□□□ 1.37
GMDS-201ENST00000380805 GJD4Q96KN9 370 aaPredicted RBP23.59■■□□□ 1.37
GMDS-201ENST00000380805 VSIG10Q8N0Z9 540 aa23.58■■□□□ 1.37
GMDS-201ENST00000380805 TMOD3Q9NYL9 352 aa23.57■■□□□ 1.36
GMDS-201ENST00000380805 EPB41L2O43491 1005 aaKnown RBP23.56■■□□□ 1.36
GMDS-201ENST00000380805 RABEP1Q15276 862 aa23.56■■□□□ 1.36
GMDS-201ENST00000380805 RABL6Q3YEC7 729 aaPredicted RBP23.56■■□□□ 1.36
GMDS-201ENST00000380805 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
GMDS-201ENST00000380805 ESYT1Q9BSJ8 1104 aa23.56■■□□□ 1.36
GMDS-201ENST00000380805 CHMLP26374 656 aa23.56■■□□□ 1.36
GMDS-201ENST00000380805 PIP4K2AP48426 406 aaPredicted RBP23.55■■□□□ 1.36
GMDS-201ENST00000380805 CASP7P55210 303 aa23.55■■□□□ 1.36
GMDS-201ENST00000380805 CLASRPQ8N2M8 674 aaKnown RBP23.55■■□□□ 1.36
GMDS-201ENST00000380805 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
GMDS-201ENST00000380805 BCL9O00512 1426 aa23.54■■□□□ 1.36
GMDS-201ENST00000380805 DDIT3P35638 169 aa23.54■■□□□ 1.36
GMDS-201ENST00000380805 FAM98CQ17RN3 349 aaKnown RBP23.53■■□□□ 1.36
GMDS-201ENST00000380805 IL17RAQ96F46 866 aa23.53■■□□□ 1.36
GMDS-201ENST00000380805 OS9Q13438 667 aaPredicted RBP23.53■■□□□ 1.36
GMDS-201ENST00000380805 TEX13AQ9BXU3 409 aaPredicted RBP23.53■■□□□ 1.36
GMDS-201ENST00000380805 PA2G4Q9UQ80 394 aaKnown RBP23.53■■□□□ 1.36
GMDS-201ENST00000380805 GLRX3O76003 335 aaKnown RBP23.52■■□□□ 1.36
GMDS-201ENST00000380805 EPHA10Q5JZY3 1008 aa23.52■■□□□ 1.36
GMDS-201ENST00000380805 COPRSQ9NQ92 184 aa23.52■■□□□ 1.36
GMDS-201ENST00000380805 DOT1LQ8TEK3 1739 aa23.51■■□□□ 1.35
GMDS-201ENST00000380805 TRIM6-TRIM34B2RNG4 842 aa23.51■■□□□ 1.35
GMDS-201ENST00000380805 SASH1O94885 1247 aa23.51■■□□□ 1.35
GMDS-201ENST00000380805 PIGBQ92521 554 aa23.51■■□□□ 1.35
GMDS-201ENST00000380805 CDCA7Q9BWT1 371 aaPredicted RBP23.51■■□□□ 1.35
GMDS-201ENST00000380805 THRAP3Q9Y2W1 955 aaKnown RBP23.51■■□□□ 1.35
GMDS-201ENST00000380805 K7ELQ4 463 aaPredicted RBP23.5■■□□□ 1.35
GMDS-201ENST00000380805 PTCD1O75127 700 aaKnown RBP23.5■■□□□ 1.35
GMDS-201ENST00000380805 A1BGP04217 495 aa23.5■■□□□ 1.35
GMDS-201ENST00000380805 H7C1W4 665 aa23.5■■□□□ 1.35
GMDS-201ENST00000380805 CD2BP2O95400 341 aaKnown RBP23.5■■□□□ 1.35
GMDS-201ENST00000380805 RFX5P48382 616 aaPredicted RBP23.5■■□□□ 1.35
GMDS-201ENST00000380805 RBM6P78332 1123 aaKnown RBP23.5■■□□□ 1.35
GMDS-201ENST00000380805 BARGINQ6ZT62 677 aa23.5■■□□□ 1.35
GMDS-201ENST00000380805 TTLL7Q6ZT98 887 aa23.5■■□□□ 1.35
GMDS-201ENST00000380805 RILPL2Q969X0 211 aa23.5■■□□□ 1.35
GMDS-201ENST00000380805 ECHDC1Q9NTX5 307 aa23.5■■□□□ 1.35
GMDS-201ENST00000380805 CHMP5Q9NZZ3 219 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms