RNA–Protein interactions for RNA: ENST00000380416.5

PMS2-202, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 2

Gene PMS2, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-202ENST00000380416 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
PMS2-202ENST00000380416 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
PMS2-202ENST00000380416 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
PMS2-202ENST00000380416 COL3A1P02461 1466 aaPredicted RBP11.74□□□□□ -0.53
PMS2-202ENST00000380416 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
PMS2-202ENST00000380416 SIK1P57059 783 aa11.73□□□□□ -0.53
PMS2-202ENST00000380416 LTBP1Q14766 1721 aa11.73□□□□□ -0.53
PMS2-202ENST00000380416 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
PMS2-202ENST00000380416 SCN11AQ9UI33 1791 aa11.73□□□□□ -0.53
PMS2-202ENST00000380416 PARP3Q9Y6F1 533 aa11.73□□□□□ -0.53
PMS2-202ENST00000380416 COL5A3P25940 1745 aaPredicted RBP11.72□□□□□ -0.53
PMS2-202ENST00000380416 POTEMA6NI47 508 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 RASSF10A6NK89 507 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 TMEM88BA6NKF7 163 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 ERVV-2B6SEH9 535 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 HMOX1P09601 288 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 GYS1P13807 737 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 ITPK1Q13572 414 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 CFAP53Q96M91 514 aa11.72□□□□□ -0.53
PMS2-202ENST00000380416 ZNF831Q5JPB2 1677 aa11.71□□□□□ -0.53
PMS2-202ENST00000380416 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.71□□□□□ -0.53
PMS2-202ENST00000380416 U2SURPO15042 1029 aaKnown RBP11.71□□□□□ -0.53
PMS2-202ENST00000380416 CHRNA5P30532 468 aa11.71□□□□□ -0.53
PMS2-202ENST00000380416 CABP4P57796 275 aa11.71□□□□□ -0.53
PMS2-202ENST00000380416 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.53
PMS2-202ENST00000380416 ADAMTSL1Q8N6G6 1762 aa11.7□□□□□ -0.54
PMS2-202ENST00000380416 STK25O00506 426 aa11.7□□□□□ -0.54
PMS2-202ENST00000380416 MCOLN1Q9GZU1 580 aa11.7□□□□□ -0.54
PMS2-202ENST00000380416 ASAP1Q9ULH1 1129 aa11.7□□□□□ -0.54
PMS2-202ENST00000380416 SCN4AP35499 1836 aa11.7□□□□□ -0.54
PMS2-202ENST00000380416 WDR33Q9C0J8 1336 aaKnown RBP11.69□□□□□ -0.54
PMS2-202ENST00000380416 ATP6V1AP38606 617 aa11.69□□□□□ -0.54
PMS2-202ENST00000380416 AKAP4Q5JQC9 854 aa11.69□□□□□ -0.54
PMS2-202ENST00000380416 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
PMS2-202ENST00000380416 DPY19L2Q6NUT2 758 aa11.69□□□□□ -0.54
PMS2-202ENST00000380416 ATG3Q9NT62 314 aa11.69□□□□□ -0.54
PMS2-202ENST00000380416 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
PMS2-202ENST00000380416 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
PMS2-202ENST00000380416 PPP2R1AP30153 589 aa11.68□□□□□ -0.54
PMS2-202ENST00000380416 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
PMS2-202ENST00000380416 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
PMS2-202ENST00000380416 NUDCQ9Y266 331 aa11.68□□□□□ -0.54
PMS2-202ENST00000380416 RTCBQ9Y3I0 505 aaKnown RBP11.68□□□□□ -0.54
PMS2-202ENST00000380416 NFKBIEO00221 500 aa11.67□□□□□ -0.54
PMS2-202ENST00000380416 DEFB115Q30KQ5 88 aa11.67□□□□□ -0.54
PMS2-202ENST00000380416 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
PMS2-202ENST00000380416 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
PMS2-202ENST00000380416 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
PMS2-202ENST00000380416 MRC1P22897 1456 aa11.67□□□□□ -0.54
PMS2-202ENST00000380416 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
PMS2-202ENST00000380416 ADAMTS7Q9UKP4 1686 aa11.66□□□□□ -0.54
PMS2-202ENST00000380416 DDR1Q08345 913 aa11.66□□□□□ -0.54
PMS2-202ENST00000380416 MTHFSDQ2M296 383 aaKnown RBP11.66□□□□□ -0.54
PMS2-202ENST00000380416 GAS2L2Q8NHY3 880 aa11.66□□□□□ -0.54
PMS2-202ENST00000380416 MYH14Q7Z406 1995 aaKnown RBP11.66□□□□□ -0.54
PMS2-202ENST00000380416 CASP8AP2Q9UKL3 1982 aa11.66□□□□□ -0.54
PMS2-202ENST00000380416 NFATC2IPQ8NCF5 419 aa11.65□□□□□ -0.54
PMS2-202ENST00000380416 SLC52A2Q9HAB3 445 aa11.65□□□□□ -0.54
PMS2-202ENST00000380416 NRXN2Q9P2S2 1712 aa11.65□□□□□ -0.54
PMS2-202ENST00000380416 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.55
PMS2-202ENST00000380416 TJP1Q07157 1748 aa11.64□□□□□ -0.55
PMS2-202ENST00000380416 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
PMS2-202ENST00000380416 U2AF1L5P0DN76 240 aaPredicted RBP11.64□□□□□ -0.55
PMS2-202ENST00000380416 RFC4P35249 363 aa11.64□□□□□ -0.55
PMS2-202ENST00000380416 U2AF1Q01081 240 aaKnown RBP eCLIP11.64□□□□□ -0.55
PMS2-202ENST00000380416 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
PMS2-202ENST00000380416 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
PMS2-202ENST00000380416 CNTNAP4Q9C0A0 1308 aa11.63□□□□□ -0.55
PMS2-202ENST00000380416 PTCD1O75127 700 aaKnown RBP11.63□□□□□ -0.55
PMS2-202ENST00000380416 PRKAR2BP31323 418 aa11.63□□□□□ -0.55
PMS2-202ENST00000380416 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
PMS2-202ENST00000380416 LGR6Q9HBX8 967 aa11.63□□□□□ -0.55
PMS2-202ENST00000380416 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
PMS2-202ENST00000380416 GNAT3A8MTJ3 354 aa11.62□□□□□ -0.55
PMS2-202ENST00000380416 SLC4A9Q96Q91 983 aa11.62□□□□□ -0.55
PMS2-202ENST00000380416 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
PMS2-202ENST00000380416 TSKSQ9UJT2 592 aa11.62□□□□□ -0.55
PMS2-202ENST00000380416 STK24Q9Y6E0 443 aa11.62□□□□□ -0.55
PMS2-202ENST00000380416 SIPA1L3O60292 1781 aaPredicted RBP11.62□□□□□ -0.55
PMS2-202ENST00000380416 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
PMS2-202ENST00000380416 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
PMS2-202ENST00000380416 RPS6KA4O75676 772 aa11.61□□□□□ -0.55
PMS2-202ENST00000380416 DDNO94850 711 aaPredicted RBP11.61□□□□□ -0.55
PMS2-202ENST00000380416 PDAP1Q13442 181 aaKnown RBP11.61□□□□□ -0.55
PMS2-202ENST00000380416 DGKZQ13574 1117 aa11.61□□□□□ -0.55
PMS2-202ENST00000380416 ERFEQ4G0M1 354 aa11.61□□□□□ -0.55
PMS2-202ENST00000380416 L3MBTL3Q96JM7 780 aaPredicted RBP11.61□□□□□ -0.55
PMS2-202ENST00000380416 TAF1DQ9H5J8 278 aaPredicted RBP11.61□□□□□ -0.55
PMS2-202ENST00000380416 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
PMS2-202ENST00000380416 NEFMP07197 916 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
PMS2-202ENST00000380416 SOX10P56693 466 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 TEFQ10587 303 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 DDX10Q13206 875 aaKnown RBP11.6□□□□□ -0.55
PMS2-202ENST00000380416 RALBP1Q15311 655 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 TTC5Q8N0Z6 440 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 TTLL6Q8N841 843 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 KIF12Q96FN5 646 aa11.6□□□□□ -0.55
PMS2-202ENST00000380416 CAPNS2Q96L46 248 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms