RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CDC45O75419 566 aa24.52■■□□□ 1.52
PDLIM5-205ENST00000380180 PLBD2Q8NHP8 589 aa24.52■■□□□ 1.52
PDLIM5-205ENST00000380180 KAZALD1Q96I82 304 aa24.52■■□□□ 1.52
PDLIM5-205ENST00000380180 SUCLG2Q96I99 432 aa24.52■■□□□ 1.52
PDLIM5-205ENST00000380180 ATG3Q9NT62 314 aa24.51■■□□□ 1.51
PDLIM5-205ENST00000380180 TUBGCP6Q96RT7 1819 aa24.51■■□□□ 1.51
PDLIM5-205ENST00000380180 LRP6O75581 1613 aa24.51■■□□□ 1.51
PDLIM5-205ENST00000380180 CDCA7Q9BWT1 371 aaPredicted RBP24.51■■□□□ 1.51
PDLIM5-205ENST00000380180 DAXXQ9UER7 740 aaPredicted RBP24.51■■□□□ 1.51
PDLIM5-205ENST00000380180 THRAP3Q9Y2W1 955 aaKnown RBP24.51■■□□□ 1.51
PDLIM5-205ENST00000380180 SDSP20132 328 aa24.5■■□□□ 1.51
PDLIM5-205ENST00000380180 NUP188Q5SRE5 1749 aa24.5■■□□□ 1.51
PDLIM5-205ENST00000380180 RHPN1Q8TCX5 695 aa24.49■■□□□ 1.51
PDLIM5-205ENST00000380180 BICC1Q9H694 974 aaKnown RBP24.49■■□□□ 1.51
PDLIM5-205ENST00000380180 IL1RAPL2Q9NP60 686 aa24.49■■□□□ 1.51
PDLIM5-205ENST00000380180 BCL9O00512 1426 aa24.48■■□□□ 1.51
PDLIM5-205ENST00000380180 MX1P20591 662 aa24.48■■□□□ 1.51
PDLIM5-205ENST00000380180 TTLL7Q6ZT98 887 aa24.48■■□□□ 1.51
PDLIM5-205ENST00000380180 HSP90AB4PQ58FF6 505 aa24.47■■□□□ 1.51
PDLIM5-205ENST00000380180 VSIG10Q8N0Z9 540 aa24.47■■□□□ 1.51
PDLIM5-205ENST00000380180 SLIT2O94813 1529 aa24.47■■□□□ 1.51
PDLIM5-205ENST00000380180 DOT1LQ8TEK3 1739 aa24.47■■□□□ 1.51
PDLIM5-205ENST00000380180 KIF1BPQ96EK5 621 aa24.47■■□□□ 1.51
PDLIM5-205ENST00000380180 SPATA31A5Q5VU36 1347 aa24.47■■□□□ 1.51
PDLIM5-205ENST00000380180 SPATA31A7Q8IWB4 1347 aa24.47■■□□□ 1.51
PDLIM5-205ENST00000380180 ATP5J2-PTCD1G3V325 749 aa24.46■■□□□ 1.51
PDLIM5-205ENST00000380180 TSHZ3Q63HK5 1081 aa24.46■■□□□ 1.51
PDLIM5-205ENST00000380180 RBM42Q9BTD8 480 aaKnown RBP24.46■■□□□ 1.51
PDLIM5-205ENST00000380180 TEX13AQ9BXU3 409 aaPredicted RBP24.46■■□□□ 1.51
PDLIM5-205ENST00000380180 DDB1Q16531 1140 aa24.45■■□□□ 1.51
PDLIM5-205ENST00000380180 DNAJC10Q8IXB1 793 aa24.45■■□□□ 1.51
PDLIM5-205ENST00000380180 STAP2Q9UGK3 403 aa24.45■■□□□ 1.51
PDLIM5-205ENST00000380180 SYTL4Q96C24 671 aaPredicted RBP24.45■■□□□ 1.5
PDLIM5-205ENST00000380180 CCDC9Q9Y3X0 531 aaKnown RBP24.44■■□□□ 1.5
PDLIM5-205ENST00000380180 RBM25P49756 843 aaKnown RBP24.44■■□□□ 1.5
PDLIM5-205ENST00000380180 JARID2Q92833 1246 aaPredicted RBP24.44■■□□□ 1.5
PDLIM5-205ENST00000380180 PA2G4Q9UQ80 394 aaKnown RBP24.44■■□□□ 1.5
PDLIM5-205ENST00000380180 PRIM1P49642 420 aaKnown RBP24.43■■□□□ 1.5
PDLIM5-205ENST00000380180 OS9Q13438 667 aaPredicted RBP24.43■■□□□ 1.5
PDLIM5-205ENST00000380180 EPHA10Q5JZY3 1008 aa24.42■■□□□ 1.5
PDLIM5-205ENST00000380180 NUTM1Q86Y26 1132 aa24.42■■□□□ 1.5
PDLIM5-205ENST00000380180 A0A087WZG4 1122 aa24.42■■□□□ 1.5
PDLIM5-205ENST00000380180 UBE3BQ7Z3V4 1068 aa24.42■■□□□ 1.5
PDLIM5-205ENST00000380180 AK9Q5TCS8 1911 aa24.42■■□□□ 1.5
PDLIM5-205ENST00000380180 BECN1Q14457 450 aa24.41■■□□□ 1.5
PDLIM5-205ENST00000380180 ZBTB3Q9H5J0 574 aa24.41■■□□□ 1.5
PDLIM5-205ENST00000380180 STARD3NLO95772 234 aa24.4■■□□□ 1.5
PDLIM5-205ENST00000380180 BARGINQ6ZT62 677 aa24.4■■□□□ 1.5
PDLIM5-205ENST00000380180 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.4■■□□□ 1.5
PDLIM5-205ENST00000380180 SLC4A9Q96Q91 983 aa24.4■■□□□ 1.5
PDLIM5-205ENST00000380180 JCADQ9P266 1359 aa24.39■■□□□ 1.5
PDLIM5-205ENST00000380180 AOX1Q06278 1338 aa24.39■■□□□ 1.5
PDLIM5-205ENST00000380180 CASC1Q6TDU7 716 aa24.39■■□□□ 1.5
PDLIM5-205ENST00000380180 UNC5CLQ8IV45 518 aa24.39■■□□□ 1.5
PDLIM5-205ENST00000380180 MARCH10Q8NA82 808 aaPredicted RBP24.39■■□□□ 1.5
PDLIM5-205ENST00000380180 EIF5BO60841 1220 aaKnown RBP24.39■■□□□ 1.49
PDLIM5-205ENST00000380180 CASP7P55210 303 aa24.38■■□□□ 1.49
PDLIM5-205ENST00000380180 ERC1Q8IUD2 1116 aa24.38■■□□□ 1.49
PDLIM5-205ENST00000380180 ZNF330Q9Y3S2 320 aaPredicted RBP24.38■■□□□ 1.49
PDLIM5-205ENST00000380180 TJP1Q07157 1748 aa24.38■■□□□ 1.49
PDLIM5-205ENST00000380180 COL15A1P39059 1388 aa24.38■■□□□ 1.49
PDLIM5-205ENST00000380180 NGLY1Q96IV0 654 aa24.37■■□□□ 1.49
PDLIM5-205ENST00000380180 C8orf37Q96NL8 207 aa24.37■■□□□ 1.49
PDLIM5-205ENST00000380180 H7C1W4 665 aa24.37■■□□□ 1.49
PDLIM5-205ENST00000380180 CWC25Q9NXE8 425 aaPredicted RBP24.37■■□□□ 1.49
PDLIM5-205ENST00000380180 G3BP1Q13283 466 aaKnown RBP eCLIP24.36■■□□□ 1.49
PDLIM5-205ENST00000380180 CLASRPQ8N2M8 674 aaKnown RBP24.36■■□□□ 1.49
PDLIM5-205ENST00000380180 TRIM6-TRIM34B2RNG4 842 aa24.35■■□□□ 1.49
PDLIM5-205ENST00000380180 CYP19A1P11511 503 aaPredicted RBP24.35■■□□□ 1.49
PDLIM5-205ENST00000380180 RABL6Q3YEC7 729 aaPredicted RBP24.35■■□□□ 1.49
PDLIM5-205ENST00000380180 TBC1D2Q9BYX2 928 aa24.35■■□□□ 1.49
PDLIM5-205ENST00000380180 CCDC191Q8NCU4 936 aa24.35■■□□□ 1.49
PDLIM5-205ENST00000380180 RILPL2Q969X0 211 aa24.35■■□□□ 1.49
PDLIM5-205ENST00000380180 ACSBG1Q96GR2 724 aa24.35■■□□□ 1.49
PDLIM5-205ENST00000380180 SASH1O94885 1247 aa24.34■■□□□ 1.49
PDLIM5-205ENST00000380180 KLHDC4Q8TBB5 520 aa24.34■■□□□ 1.49
PDLIM5-205ENST00000380180 PI4K2BQ8TCG2 481 aa24.34■■□□□ 1.49
PDLIM5-205ENST00000380180 BCL9LQ86UU0 1499 aa24.34■■□□□ 1.49
PDLIM5-205ENST00000380180 SIL1Q9H173 461 aa24.34■■□□□ 1.49
PDLIM5-205ENST00000380180 A0A0G2JS52 829 aa24.33■■□□□ 1.49
PDLIM5-205ENST00000380180 KIF6Q6ZMV9 814 aa24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 KIF2CQ99661 725 aa24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 USP26Q9BXU7 913 aa24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 USP42Q9H9J4 1324 aaKnown RBP24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 RFX5P48382 616 aaPredicted RBP24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 TCIRG1Q13488 830 aa24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 RTL5Q5HYW3 569 aaPredicted RBP24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 ISCA1Q9BUE6 129 aa24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.32■■□□□ 1.48
PDLIM5-205ENST00000380180 FOXO4P98177 505 aa24.31■■□□□ 1.48
PDLIM5-205ENST00000380180 VPS72Q15906 364 aa24.31■■□□□ 1.48
PDLIM5-205ENST00000380180 FAM98CQ17RN3 349 aaKnown RBP24.31■■□□□ 1.48
PDLIM5-205ENST00000380180 COPRSQ9NQ92 184 aa24.31■■□□□ 1.48
PDLIM5-205ENST00000380180 ARXQ96QS3 562 aa24.3■■□□□ 1.48
PDLIM5-205ENST00000380180 TTC41PQ6P2S7 1318 aa24.3■■□□□ 1.48
PDLIM5-205ENST00000380180 ERC2O15083 957 aa24.3■■□□□ 1.48
PDLIM5-205ENST00000380180 LMBR1LQ6UX01 489 aa24.3■■□□□ 1.48
PDLIM5-205ENST00000380180 NUP98P52948 1817 aa24.29■■□□□ 1.48
PDLIM5-205ENST00000380180 IFIT2P09913 472 aaKnown RBP24.29■■□□□ 1.48
PDLIM5-205ENST00000380180 PTPN12Q05209 780 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms