RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 KIF18AQ8NI77 898 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 RUNDC1Q96C34 613 aa15.25■□□□□ 0.03
HIPK3-202ENST00000379016 NOP9Q86U38 636 aaKnown RBP15.24■□□□□ 0.03
HIPK3-202ENST00000379016 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
HIPK3-202ENST00000379016 CEP57Q86XR8 500 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 TBC1D5Q92609 795 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 EP400NLQ6ZTU2 488 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 FAM114A2Q9NRY5 505 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
HIPK3-202ENST00000379016 CALCOCO1Q9P1Z2 691 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 FAM169AQ9Y6X4 670 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 GOLGA8AA7E2F4 631 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 GOLGA8BA8MQT2 603 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 ZFYP08048 801 aaPredicted RBP15.24■□□□□ 0.03
HIPK3-202ENST00000379016 FAM160A1Q05DH4 1040 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 BIN2Q9UBW5 565 aaPredicted RBP15.24■□□□□ 0.03
HIPK3-202ENST00000379016 YEATS4O95619 227 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 CCDC50Q8IVM0 306 aa15.24■□□□□ 0.03
HIPK3-202ENST00000379016 AKNAD1Q5T1N1 836 aa15.23■□□□□ 0.03
HIPK3-202ENST00000379016 NSRP1Q9H0G5 558 aaKnown RBP15.23■□□□□ 0.03
HIPK3-202ENST00000379016 GAS8O95995 478 aa15.23■□□□□ 0.03
HIPK3-202ENST00000379016 TATP17735 454 aaPredicted RBP15.23■□□□□ 0.03
HIPK3-202ENST00000379016 PLEKHO1Q53GL0 409 aaPredicted RBP15.23■□□□□ 0.03
HIPK3-202ENST00000379016 SETDB1Q15047 1291 aa15.23■□□□□ 0.03
HIPK3-202ENST00000379016 VPS52Q8N1B4 723 aa15.23■□□□□ 0.03
HIPK3-202ENST00000379016 PLCB3Q01970 1234 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 DDX27Q96GQ7 796 aaKnown RBP15.22■□□□□ 0.03
HIPK3-202ENST00000379016 TTC21AQ8NDW8 1320 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 TNIKQ9UKE5 1360 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 ZPR1O75312 459 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 IDEP14735 1019 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 PDCD7Q8N8D1 485 aaKnown RBP15.22■□□□□ 0.03
HIPK3-202ENST00000379016 MPHOSPH6Q99547 160 aaKnown RBP15.22■□□□□ 0.03
HIPK3-202ENST00000379016 TRIM7Q9C029 511 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
HIPK3-202ENST00000379016 OPA1O60313 960 aa15.21■□□□□ 0.03
HIPK3-202ENST00000379016 PLS1Q14651 629 aa15.21■□□□□ 0.03
HIPK3-202ENST00000379016 SMG6Q86US8 1419 aaKnown RBP15.21■□□□□ 0.03
HIPK3-202ENST00000379016 PDIA4P13667 645 aaKnown RBP15.21■□□□□ 0.03
HIPK3-202ENST00000379016 CALML4Q96GE6 196 aa15.21■□□□□ 0.03
HIPK3-202ENST00000379016 CTNNA3Q9UI47 895 aa15.21■□□□□ 0.03
HIPK3-202ENST00000379016 BICDL2A1A5D9 508 aa15.21■□□□□ 0.03
HIPK3-202ENST00000379016 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.03
HIPK3-202ENST00000379016 LCA5Q86VQ0 697 aa15.21■□□□□ 0.03
HIPK3-202ENST00000379016 CASTP20810 708 aaKnown RBP15.21■□□□□ 0.03
HIPK3-202ENST00000379016 UAP1Q16222 522 aaPredicted RBP15.21■□□□□ 0.03
HIPK3-202ENST00000379016 CCDC83Q8IWF9 413 aa15.21■□□□□ 0.02
HIPK3-202ENST00000379016 ANKS4BQ8N8V4 417 aa15.21■□□□□ 0.02
HIPK3-202ENST00000379016 METTL24Q5JXM2 366 aa15.2■□□□□ 0.02
HIPK3-202ENST00000379016 SEC62Q99442 399 aaKnown RBP15.2■□□□□ 0.02
HIPK3-202ENST00000379016 ATRIPQ8WXE1 791 aa15.2■□□□□ 0.02
HIPK3-202ENST00000379016 GRPEL1Q9HAV7 217 aa15.2■□□□□ 0.02
HIPK3-202ENST00000379016 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
HIPK3-202ENST00000379016 WDR46O15213 610 aaKnown RBP15.2■□□□□ 0.02
HIPK3-202ENST00000379016 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
HIPK3-202ENST00000379016 PPP2R5DQ14738 602 aa15.2■□□□□ 0.02
HIPK3-202ENST00000379016 CNNM3Q8NE01 707 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 DDX12PQ92771 950 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 NUF2Q9BZD4 464 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 STXBP4Q6ZWJ1 553 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 HSPA1LP34931 641 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 PPP1R21Q6ZMI0 780 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 CCDC25Q86WR0 208 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 MAK16Q9BXY0 300 aaKnown RBP15.19■□□□□ 0.02
HIPK3-202ENST00000379016 KCNK9Q9NPC2 374 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 SYCE3A1L190 88 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 ADAMTS2O95450 1211 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 MTHFSP49914 203 aa15.19■□□□□ 0.02
HIPK3-202ENST00000379016 CEP126Q9P2H0 1117 aa15.18■□□□□ 0.02
HIPK3-202ENST00000379016 RABGAP1Q9Y3P9 1069 aa15.18■□□□□ 0.02
HIPK3-202ENST00000379016 HDGFL1Q5TGJ6 251 aa15.18■□□□□ 0.02
HIPK3-202ENST00000379016 ZHX1Q9UKY1 873 aaPredicted RBP15.18■□□□□ 0.02
HIPK3-202ENST00000379016 NOC2LQ9Y3T9 749 aaKnown RBP15.18■□□□□ 0.02
HIPK3-202ENST00000379016 IL27Q8NEV9 243 aa15.18■□□□□ 0.02
HIPK3-202ENST00000379016 PSPC1Q8WXF1 523 aaKnown RBP15.18■□□□□ 0.02
HIPK3-202ENST00000379016 FRMD4BQ9Y2L6 1034 aa15.18■□□□□ 0.02
HIPK3-202ENST00000379016 CASQ2O14958 399 aaPredicted RBP15.18■□□□□ 0.02
HIPK3-202ENST00000379016 NCBP1Q09161 790 aaKnown RBP15.18■□□□□ 0.02
HIPK3-202ENST00000379016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.17■□□□□ 0.02
HIPK3-202ENST00000379016 MGEA5O60502 916 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 TXNDC2Q86VQ3 553 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
HIPK3-202ENST00000379016 TTC12Q9H892 705 aaPredicted RBP15.17■□□□□ 0.02
HIPK3-202ENST00000379016 PPANQ9NQ55 473 aaKnown RBP15.17■□□□□ 0.02
HIPK3-202ENST00000379016 BAG1Q99933 345 aaPredicted RBP15.17■□□□□ 0.02
HIPK3-202ENST00000379016 TACC1O75410 805 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 CTCFLQ8NI51 663 aaPredicted RBP15.17■□□□□ 0.02
HIPK3-202ENST00000379016 C16orf45Q96MC5 204 aaPredicted RBP15.17■□□□□ 0.02
HIPK3-202ENST00000379016 PLVAPQ9BX97 442 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 A0A087WZG4 1122 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 FERMT3Q86UX7 667 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 NAPBQ9H115 298 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 STIM2Q9P246 746 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 BCAR3O75815 825 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 ARID5AQ03989 594 aa15.17■□□□□ 0.02
HIPK3-202ENST00000379016 TSR2Q969E8 191 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms