RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 VPS37CA5D8V6 355 aaPredicted RBP18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 G2E3Q7L622 706 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 ERO1AQ96HE7 468 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 DACT1Q9NYF0 836 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 SLFNL1Q499Z3 407 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 LRRC8AQ8IWT6 810 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 CABP1Q9NZU7 370 aa18.59■□□□□ 0.57
CSNK1A1-202ENST00000377843 TRMT1Q9NXH9 659 aaKnown RBP18.58■□□□□ 0.57
CSNK1A1-202ENST00000377843 STAP2Q9UGK3 403 aa18.58■□□□□ 0.57
CSNK1A1-202ENST00000377843 FHOD1Q9Y613 1164 aa18.58■□□□□ 0.57
CSNK1A1-202ENST00000377843 RAD51AP2Q09MP3 1159 aa18.58■□□□□ 0.56
CSNK1A1-202ENST00000377843 PTPN14Q15678 1187 aa18.58■□□□□ 0.56
CSNK1A1-202ENST00000377843 NFATC2IPQ8NCF5 419 aa18.58■□□□□ 0.56
CSNK1A1-202ENST00000377843 DNAJC25Q9H1X3 360 aa18.58■□□□□ 0.56
CSNK1A1-202ENST00000377843 TNMDQ9H2S6 317 aa18.58■□□□□ 0.56
CSNK1A1-202ENST00000377843 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.58■□□□□ 0.56
CSNK1A1-202ENST00000377843 PTPRCP08575 1304 aa18.58■□□□□ 0.56
CSNK1A1-202ENST00000377843 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
CSNK1A1-202ENST00000377843 FERMT3Q86UX7 667 aa18.57■□□□□ 0.56
CSNK1A1-202ENST00000377843 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
CSNK1A1-202ENST00000377843 LMOD3Q0VAK6 560 aa18.57■□□□□ 0.56
CSNK1A1-202ENST00000377843 HDGFL2Q7Z4V5 671 aaPredicted RBP18.57■□□□□ 0.56
CSNK1A1-202ENST00000377843 HYPKQ9NX55 129 aa18.57■□□□□ 0.56
CSNK1A1-202ENST00000377843 DLG5Q8TDM6 1919 aa18.57■□□□□ 0.56
CSNK1A1-202ENST00000377843 H2AFXP16104 143 aaPredicted RBP18.56■□□□□ 0.56
CSNK1A1-202ENST00000377843 LSG1Q9H089 658 aaKnown RBP18.56■□□□□ 0.56
CSNK1A1-202ENST00000377843 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
CSNK1A1-202ENST00000377843 CDK12Q9NYV4 1490 aaPredicted RBP18.56■□□□□ 0.56
CSNK1A1-202ENST00000377843 CCDC171Q6TFL3 1326 aa18.56■□□□□ 0.56
CSNK1A1-202ENST00000377843 PLA2G4AP47712 749 aa18.55■□□□□ 0.56
CSNK1A1-202ENST00000377843 ZNF165P49910 485 aa18.55■□□□□ 0.56
CSNK1A1-202ENST00000377843 ERCC6LQ2NKX8 1250 aa18.55■□□□□ 0.56
CSNK1A1-202ENST00000377843 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
CSNK1A1-202ENST00000377843 SGSM2O43147 1006 aa18.55■□□□□ 0.56
CSNK1A1-202ENST00000377843 SLU7O95391 586 aaKnown RBP18.55■□□□□ 0.56
CSNK1A1-202ENST00000377843 ZBTB9Q96C00 473 aa18.55■□□□□ 0.56
CSNK1A1-202ENST00000377843 SKILP12757 684 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 CASTP20810 708 aaKnown RBP18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 FAM193AP78312 1265 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 RBM43Q6ZSC3 357 aaKnown RBP18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 PAXIP1Q6ZW49 1069 aaPredicted RBP18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 CDC37L1Q7L3B6 337 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 NECAB1Q8N987 351 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 CHL1O00533 1208 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 GNAI2P04899 355 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 CCZ1BP86790 482 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 CCZ1P86791 482 aaPredicted RBP18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 IL1RAPL2Q9NP60 686 aa18.54■□□□□ 0.56
CSNK1A1-202ENST00000377843 CLCN6P51797 869 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 ADCK5Q3MIX3 580 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 MCM10Q7L590 875 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 NUTM1Q86Y26 1132 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 DDX54Q8TDD1 881 aaKnown RBP18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 ZRANB1Q9UGI0 708 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 BMS1Q14692 1282 aaKnown RBP18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 CREBRFQ8IUR6 639 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 SYTL4Q96C24 671 aaPredicted RBP18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 SPG7Q9UQ90 795 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
CSNK1A1-202ENST00000377843 TTC21AQ8NDW8 1320 aa18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 NR1I2O75469 434 aa18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 CDC25BP30305 580 aa18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 CLSTN2Q9H4D0 955 aa18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 EPB41L2O43491 1005 aaKnown RBP18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 PNMA6AP0CW24 399 aaPredicted RBP18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 KRT85P78386 507 aa18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 COL9A3Q14050 684 aaPredicted RBP18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 CCAR2Q8N163 923 aaKnown RBP18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.56
CSNK1A1-202ENST00000377843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 ME3Q16798 604 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 AEBP1Q8IUX7 1158 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 ZFP91Q96JP5 570 aaPredicted RBP18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 CDK19Q9BWU1 502 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 AATKQ6ZMQ8 1374 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 PTPRMP28827 1452 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 ELP1O95163 1332 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 KIF20BQ96Q89 1820 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
CSNK1A1-202ENST00000377843 CCDC69A6NI79 296 aa18.5■□□□□ 0.55
CSNK1A1-202ENST00000377843 IQCB1Q15051 598 aa18.5■□□□□ 0.55
CSNK1A1-202ENST00000377843 TNRQ92752 1358 aa18.5■□□□□ 0.55
CSNK1A1-202ENST00000377843 C11orf57Q6ZUT1 292 aaPredicted RBP18.5■□□□□ 0.55
CSNK1A1-202ENST00000377843 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 SPATA31D1Q6ZQQ2 1576 aa18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 POLR3GO15318 223 aaPredicted RBP18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 ATP8B2P98198 1209 aa18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 RRS1Q15050 365 aaKnown RBP18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 LARP1BQ659C4 914 aaKnown RBP18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 PI4K2BQ8TCG2 481 aa18.49■□□□□ 0.55
CSNK1A1-202ENST00000377843 PGBD1Q96JS3 809 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms