RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 NOL7Q9UMY1 257 aaKnown RBP15.71■□□□□ 0.11
DFFA-202ENST00000377038 KRT18P05783 430 aaKnown RBP15.71■□□□□ 0.11
DFFA-202ENST00000377038 SLF2Q8IX21 1173 aa15.71■□□□□ 0.11
DFFA-202ENST00000377038 UTP14AQ9BVJ6 771 aaKnown RBP15.71■□□□□ 0.11
DFFA-202ENST00000377038 METP08581 1390 aa15.71■□□□□ 0.11
DFFA-202ENST00000377038 CWF19L2Q2TBE0 894 aaKnown RBP15.71■□□□□ 0.1
DFFA-202ENST00000377038 PLXNC1O60486 1568 aa15.71■□□□□ 0.1
DFFA-202ENST00000377038 RANBP6O60518 1105 aaKnown RBP15.7■□□□□ 0.1
DFFA-202ENST00000377038 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 TNNQ9UQP3 1299 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 RTCBQ9Y3I0 505 aaKnown RBP15.7■□□□□ 0.1
DFFA-202ENST00000377038 NLRP3Q96P20 1036 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 PLEKHG1Q9ULL1 1385 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 LETM1O95202 739 aaPredicted RBP15.7■□□□□ 0.1
DFFA-202ENST00000377038 CCAR2Q8N163 923 aaKnown RBP15.7■□□□□ 0.1
DFFA-202ENST00000377038 HDAC1Q13547 482 aaPredicted RBP15.7■□□□□ 0.1
DFFA-202ENST00000377038 LINS1Q8NG48 757 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 EPS15P42566 896 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 WASF1Q92558 559 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 PCDHB15Q9Y5E8 787 aa15.7■□□□□ 0.1
DFFA-202ENST00000377038 ZNF592Q92610 1267 aa15.69■□□□□ 0.1
DFFA-202ENST00000377038 CDCA7Q9BWT1 371 aaPredicted RBP15.69■□□□□ 0.1
DFFA-202ENST00000377038 TTC22Q5TAA0 569 aa15.69■□□□□ 0.1
DFFA-202ENST00000377038 ANKRD44Q8N8A2 993 aa15.69■□□□□ 0.1
DFFA-202ENST00000377038 PHAXQ9H814 394 aaKnown RBP15.69■□□□□ 0.1
DFFA-202ENST00000377038 TFCP2L1Q9NZI6 479 aa15.69■□□□□ 0.1
DFFA-202ENST00000377038 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
DFFA-202ENST00000377038 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
DFFA-202ENST00000377038 TBC1D9Q6ZT07 1266 aa15.69■□□□□ 0.1
DFFA-202ENST00000377038 NUCB1Q02818 461 aa15.68■□□□□ 0.1
DFFA-202ENST00000377038 ZNF444Q8N0Y2 327 aaPredicted RBP15.68■□□□□ 0.1
DFFA-202ENST00000377038 ZNF790Q6PG37 636 aa15.68■□□□□ 0.1
DFFA-202ENST00000377038 UQCRFS1P1P0C7P4 283 aa15.67■□□□□ 0.1
DFFA-202ENST00000377038 ATP2B3Q16720 1220 aa15.67■□□□□ 0.1
DFFA-202ENST00000377038 LGR6Q9HBX8 967 aa15.67■□□□□ 0.1
DFFA-202ENST00000377038 PA2G4Q9UQ80 394 aaKnown RBP15.67■□□□□ 0.1
DFFA-202ENST00000377038 NPHP4O75161 1426 aaPredicted RBP15.67■□□□□ 0.1
DFFA-202ENST00000377038 SPATA32Q96LK8 384 aa15.67■□□□□ 0.1
DFFA-202ENST00000377038 HMGB1P09429 215 aaKnown RBP15.67■□□□□ 0.1
DFFA-202ENST00000377038 FAM98CQ17RN3 349 aaKnown RBP15.67■□□□□ 0.1
DFFA-202ENST00000377038 TMEM132AQ24JP5 1023 aa15.67■□□□□ 0.1
DFFA-202ENST00000377038 IQCA1Q86XH1 822 aa15.67■□□□□ 0.1
DFFA-202ENST00000377038 KDM5AP29375 1690 aaKnown RBP15.67■□□□□ 0.1
DFFA-202ENST00000377038 RNF41Q9H4P4 317 aaPredicted RBP15.67■□□□□ 0.1
DFFA-202ENST00000377038 TMEM94Q12767 1356 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 NYXQ9GZU5 481 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 R3HCC1Q9Y3T6 440 aaKnown RBP15.66■□□□□ 0.1
DFFA-202ENST00000377038 KAT6BQ8WYB5 2073 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 HOMER1Q86YM7 354 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 IQSEC3Q9UPP2 1182 aaPredicted RBP15.66■□□□□ 0.1
DFFA-202ENST00000377038 NASPP49321 788 aaPredicted RBP15.66■□□□□ 0.1
DFFA-202ENST00000377038 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 LDHCP07864 332 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 PDILTQ8N807 584 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 GNPATO15228 680 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 IL15P40933 162 aaPredicted RBP15.66■□□□□ 0.1
DFFA-202ENST00000377038 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
DFFA-202ENST00000377038 RLBP1P12271 317 aa15.65■□□□□ 0.1
DFFA-202ENST00000377038 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
DFFA-202ENST00000377038 TPTE2Q6XPS3 522 aa15.65■□□□□ 0.1
DFFA-202ENST00000377038 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
DFFA-202ENST00000377038 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
DFFA-202ENST00000377038 CFAP45Q9UL16 551 aa15.65■□□□□ 0.1
DFFA-202ENST00000377038 NLRP1Q9C000 1473 aa15.65■□□□□ 0.1
DFFA-202ENST00000377038 DDX21Q9NR30 783 aaKnown RBP eCLIP15.65■□□□□ 0.1
DFFA-202ENST00000377038 SLC12A7Q9Y666 1083 aa15.65■□□□□ 0.1
DFFA-202ENST00000377038 SLC4A8Q2Y0W8 1093 aa15.65■□□□□ 0.1
DFFA-202ENST00000377038 CTCFLQ8NI51 663 aaPredicted RBP15.65■□□□□ 0.1
DFFA-202ENST00000377038 A0A0U1RQG5 324 aaPredicted RBP15.64■□□□□ 0.1
DFFA-202ENST00000377038 IFIT3O14879 490 aaKnown RBP15.64■□□□□ 0.1
DFFA-202ENST00000377038 BAG3O95817 575 aa15.64■□□□□ 0.1
DFFA-202ENST00000377038 HAND2P61296 217 aa15.64■□□□□ 0.1
DFFA-202ENST00000377038 CCDC82Q8N4S0 544 aa15.64■□□□□ 0.1
DFFA-202ENST00000377038 ZHX3Q9H4I2 956 aa15.64■□□□□ 0.1
DFFA-202ENST00000377038 ZNF76P36508 570 aa15.64■□□□□ 0.09
DFFA-202ENST00000377038 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
DFFA-202ENST00000377038 TNMDQ9H2S6 317 aa15.64■□□□□ 0.09
DFFA-202ENST00000377038 SLC52A2Q9HAB3 445 aa15.64■□□□□ 0.09
DFFA-202ENST00000377038 CIZ1Q9ULV3 898 aaPredicted RBP15.64■□□□□ 0.09
DFFA-202ENST00000377038 TRIM5Q9C035 493 aa15.64■□□□□ 0.09
DFFA-202ENST00000377038 CCDC196A0A1B0GTZ2 297 aa15.63■□□□□ 0.09
DFFA-202ENST00000377038 SMC2O95347 1197 aa15.63■□□□□ 0.09
DFFA-202ENST00000377038 LARP6Q9BRS8 491 aaKnown RBP15.63■□□□□ 0.09
DFFA-202ENST00000377038 G2E3Q7L622 706 aa15.63■□□□□ 0.09
DFFA-202ENST00000377038 SPATA31E1Q6ZUB1 1445 aa15.63■□□□□ 0.09
DFFA-202ENST00000377038 SOS1Q07889 1333 aaPredicted RBP15.63■□□□□ 0.09
DFFA-202ENST00000377038 PDE1AP54750 535 aa15.63■□□□□ 0.09
DFFA-202ENST00000377038 CCDC96Q2M329 555 aa15.63■□□□□ 0.09
DFFA-202ENST00000377038 CCNL1Q9UK58 526 aaPredicted RBP15.63■□□□□ 0.09
DFFA-202ENST00000377038 SH2B1Q9NRF2 756 aaPredicted RBP15.63■□□□□ 0.09
DFFA-202ENST00000377038 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
DFFA-202ENST00000377038 MAGEC2Q9UBF1 373 aaPredicted RBP15.63■□□□□ 0.09
DFFA-202ENST00000377038 SDSP20132 328 aa15.62■□□□□ 0.09
DFFA-202ENST00000377038 MRE11P49959 708 aa15.62■□□□□ 0.09
DFFA-202ENST00000377038 CEP85Q6P2H3 762 aa15.62■□□□□ 0.09
DFFA-202ENST00000377038 USP21Q9UK80 565 aa15.62■□□□□ 0.09
DFFA-202ENST00000377038 GOLGA8BA8MQT2 603 aa15.62■□□□□ 0.09
DFFA-202ENST00000377038 PRIM1P49642 420 aaKnown RBP15.62■□□□□ 0.09
DFFA-202ENST00000377038 SHROOM2Q13796 1616 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms