RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 PLBD2Q8NHP8 589 aa15.99■□□□□ 0.15
TRIM40-206ENST00000376724 SUCLG2Q96I99 432 aa15.99■□□□□ 0.15
TRIM40-206ENST00000376724 SLIT2O94813 1529 aa15.98■□□□□ 0.15
TRIM40-206ENST00000376724 ITGB4P16144 1822 aa15.98■□□□□ 0.15
TRIM40-206ENST00000376724 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
TRIM40-206ENST00000376724 GCKRQ14397 625 aa15.98■□□□□ 0.15
TRIM40-206ENST00000376724 TTC22Q5TAA0 569 aa15.98■□□□□ 0.15
TRIM40-206ENST00000376724 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
TRIM40-206ENST00000376724 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
TRIM40-206ENST00000376724 HDAC5Q9UQL6 1122 aa15.98■□□□□ 0.15
TRIM40-206ENST00000376724 JCADQ9P266 1359 aa15.97■□□□□ 0.15
TRIM40-206ENST00000376724 IL1RAPL2Q9NP60 686 aa15.97■□□□□ 0.15
TRIM40-206ENST00000376724 BCL9O00512 1426 aa15.97■□□□□ 0.15
TRIM40-206ENST00000376724 UNC5CLQ8IV45 518 aa15.97■□□□□ 0.15
TRIM40-206ENST00000376724 ACSBG1Q96GR2 724 aa15.97■□□□□ 0.15
TRIM40-206ENST00000376724 ZBTB3Q9H5J0 574 aa15.97■□□□□ 0.15
TRIM40-206ENST00000376724 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
TRIM40-206ENST00000376724 TSHZ3Q63HK5 1081 aa15.96■□□□□ 0.15
TRIM40-206ENST00000376724 KAZALD1Q96I82 304 aa15.96■□□□□ 0.15
TRIM40-206ENST00000376724 UTYO14607 1347 aa15.96■□□□□ 0.15
TRIM40-206ENST00000376724 PDE1AP54750 535 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 OS9Q13438 667 aaPredicted RBP15.95■□□□□ 0.14
TRIM40-206ENST00000376724 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
TRIM40-206ENST00000376724 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 ARXQ96QS3 562 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 TEX13AQ9BXU3 409 aaPredicted RBP15.95■□□□□ 0.14
TRIM40-206ENST00000376724 RAB11FIP3O75154 756 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 SLC4A3P48751 1232 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 MTX1Q13505 466 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 FAM98CQ17RN3 349 aaKnown RBP15.95■□□□□ 0.14
TRIM40-206ENST00000376724 TBC1D9Q6ZT07 1266 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 VSIG10Q8N0Z9 540 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 TBC1D32Q96NH3 1257 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 NWD2Q9ULI1 1742 aa15.95■□□□□ 0.14
TRIM40-206ENST00000376724 ARFGEF2Q9Y6D5 1785 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 STARD3NLO95772 234 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 RHPN1Q8TCX5 695 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
TRIM40-206ENST00000376724 A0A087WZG4 1122 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 CDC45O75419 566 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 UBE3BQ7Z3V4 1068 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 C22orf23Q9BZE7 217 aa15.94■□□□□ 0.14
TRIM40-206ENST00000376724 DAXXQ9UER7 740 aaPredicted RBP15.94■□□□□ 0.14
TRIM40-206ENST00000376724 LRP6O75581 1613 aa15.93■□□□□ 0.14
TRIM40-206ENST00000376724 SDSP20132 328 aa15.93■□□□□ 0.14
TRIM40-206ENST00000376724 MX1P20591 662 aa15.93■□□□□ 0.14
TRIM40-206ENST00000376724 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
TRIM40-206ENST00000376724 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
TRIM40-206ENST00000376724 DOT1LQ8TEK3 1739 aa15.93■□□□□ 0.14
TRIM40-206ENST00000376724 HSP90AB4PQ58FF6 505 aa15.92■□□□□ 0.14
TRIM40-206ENST00000376724 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
TRIM40-206ENST00000376724 EPHA10Q5JZY3 1008 aa15.92■□□□□ 0.14
TRIM40-206ENST00000376724 KIF1BPQ96EK5 621 aa15.92■□□□□ 0.14
TRIM40-206ENST00000376724 AFDNP55196 1824 aaKnown RBP15.92■□□□□ 0.14
TRIM40-206ENST00000376724 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
TRIM40-206ENST00000376724 BCL9LQ86UU0 1499 aa15.91■□□□□ 0.14
TRIM40-206ENST00000376724 SALL3Q9BXA9 1300 aa15.91■□□□□ 0.14
TRIM40-206ENST00000376724 VPS72Q15906 364 aa15.9■□□□□ 0.14
TRIM40-206ENST00000376724 USP21Q9UK80 565 aa15.9■□□□□ 0.14
TRIM40-206ENST00000376724 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
TRIM40-206ENST00000376724 KLHDC4Q8TBB5 520 aa15.9■□□□□ 0.14
TRIM40-206ENST00000376724 SIL1Q9H173 461 aa15.9■□□□□ 0.14
TRIM40-206ENST00000376724 CWC25Q9NXE8 425 aaPredicted RBP15.9■□□□□ 0.14
TRIM40-206ENST00000376724 SPATA31A6Q5VVP1 1343 aa15.89■□□□□ 0.13
TRIM40-206ENST00000376724 MEX3CQ5U5Q3 659 aaKnown RBP15.89■□□□□ 0.13
TRIM40-206ENST00000376724 KIF6Q6ZMV9 814 aa15.89■□□□□ 0.13
TRIM40-206ENST00000376724 HSPA1LP34931 641 aa15.89■□□□□ 0.13
TRIM40-206ENST00000376724 G3BP1Q13283 466 aaKnown RBP eCLIP15.89■□□□□ 0.13
TRIM40-206ENST00000376724 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
TRIM40-206ENST00000376724 TRIM6-TRIM34B2RNG4 842 aa15.88■□□□□ 0.13
TRIM40-206ENST00000376724 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
TRIM40-206ENST00000376724 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
TRIM40-206ENST00000376724 KCNQ2O43526 872 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 RILPL2Q969X0 211 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 STAP2Q9UGK3 403 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 ATP6V1AP38606 617 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 CASP7P55210 303 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 ERC1Q8IUD2 1116 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 CLASRPQ8N2M8 674 aaKnown RBP15.87■□□□□ 0.13
TRIM40-206ENST00000376724 CCDC191Q8NCU4 936 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 CHMP3Q9Y3E7 222 aa15.87■□□□□ 0.13
TRIM40-206ENST00000376724 H7C1W4 665 aa15.86■□□□□ 0.13
TRIM40-206ENST00000376724 TCIRG1Q13488 830 aa15.86■□□□□ 0.13
TRIM40-206ENST00000376724 MAP4K4O95819 1239 aaPredicted RBP15.85■□□□□ 0.13
TRIM40-206ENST00000376724 LMBR1LQ6UX01 489 aa15.85■□□□□ 0.13
TRIM40-206ENST00000376724 SASH1O94885 1247 aa15.85■□□□□ 0.13
TRIM40-206ENST00000376724 MAP3K15Q6ZN16 1313 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 LOC102724428A0A0B4J2F2 783 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 IFIT2P09913 472 aaKnown RBP15.84■□□□□ 0.13
TRIM40-206ENST00000376724 SIK1P57059 783 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 HLFQ16534 295 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 RABL6Q3YEC7 729 aaPredicted RBP15.84■□□□□ 0.13
TRIM40-206ENST00000376724 ISCA1Q9BUE6 129 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.84■□□□□ 0.13
TRIM40-206ENST00000376724 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
TRIM40-206ENST00000376724 RBM25P49756 843 aaKnown RBP15.84■□□□□ 0.13
TRIM40-206ENST00000376724 FOXO4P98177 505 aa15.84■□□□□ 0.13
TRIM40-206ENST00000376724 BECN1Q14457 450 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms