RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
DDR1-225ENST00000376568 ANKRD18BA2A2Z9 1011 aa16.46■□□□□ 0.23
DDR1-225ENST00000376568 PTPRCP08575 1304 aa16.46■□□□□ 0.23
DDR1-225ENST00000376568 SNAP23O00161 211 aa16.46■□□□□ 0.23
DDR1-225ENST00000376568 ERC2O15083 957 aa16.46■□□□□ 0.23
DDR1-225ENST00000376568 MST1RQ04912 1400 aa16.45■□□□□ 0.22
DDR1-225ENST00000376568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.45■□□□□ 0.22
DDR1-225ENST00000376568 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
DDR1-225ENST00000376568 NLRP3Q96P20 1036 aa16.45■□□□□ 0.22
DDR1-225ENST00000376568 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
DDR1-225ENST00000376568 ERVV-2B6SEH9 535 aa16.45■□□□□ 0.22
DDR1-225ENST00000376568 GOLIM4O00461 696 aa16.45■□□□□ 0.22
DDR1-225ENST00000376568 JCADQ9P266 1359 aa16.44■□□□□ 0.22
DDR1-225ENST00000376568 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
DDR1-225ENST00000376568 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
DDR1-225ENST00000376568 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
DDR1-225ENST00000376568 ATP2B2Q01814 1243 aa16.44■□□□□ 0.22
DDR1-225ENST00000376568 HLFQ16534 295 aa16.44■□□□□ 0.22
DDR1-225ENST00000376568 ZNF772Q68DY9 489 aaPredicted RBP16.44■□□□□ 0.22
DDR1-225ENST00000376568 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
DDR1-225ENST00000376568 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
DDR1-225ENST00000376568 ZBTB7BO15156 539 aaPredicted RBP16.43■□□□□ 0.22
DDR1-225ENST00000376568 MX1P20591 662 aa16.43■□□□□ 0.22
DDR1-225ENST00000376568 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
DDR1-225ENST00000376568 UPF3BQ9BZI7 483 aaKnown RBP16.43■□□□□ 0.22
DDR1-225ENST00000376568 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
DDR1-225ENST00000376568 TPTE2Q6XPS3 522 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
DDR1-225ENST00000376568 IFIT1P09914 478 aaKnown RBP16.42■□□□□ 0.22
DDR1-225ENST00000376568 PIBF1Q8WXW3 757 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
DDR1-225ENST00000376568 MYO3AQ8NEV4 1616 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 ZBTB7AO95365 584 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 CEP85Q6P2H3 762 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 USP44Q9H0E7 712 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
DDR1-225ENST00000376568 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
DDR1-225ENST00000376568 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
DDR1-225ENST00000376568 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
DDR1-225ENST00000376568 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
DDR1-225ENST00000376568 C22orf23Q9BZE7 217 aa16.41■□□□□ 0.22
DDR1-225ENST00000376568 CDC42BPGQ6DT37 1551 aa16.41■□□□□ 0.22
DDR1-225ENST00000376568 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
DDR1-225ENST00000376568 TFCP2Q12800 502 aa16.4■□□□□ 0.22
DDR1-225ENST00000376568 CNBD1Q8NA66 436 aa16.4■□□□□ 0.22
DDR1-225ENST00000376568 TECPR2O15040 1411 aa16.4■□□□□ 0.22
DDR1-225ENST00000376568 DHX16O60231 1041 aaKnown RBP16.4■□□□□ 0.22
DDR1-225ENST00000376568 STK3Q13188 491 aa16.4■□□□□ 0.22
DDR1-225ENST00000376568 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
DDR1-225ENST00000376568 BAG6P46379 1132 aa16.4■□□□□ 0.22
DDR1-225ENST00000376568 RBM26Q5T8P6 1007 aaKnown RBP16.4■□□□□ 0.22
DDR1-225ENST00000376568 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
DDR1-225ENST00000376568 GCKRQ14397 625 aa16.39■□□□□ 0.21
DDR1-225ENST00000376568 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
DDR1-225ENST00000376568 ECM2O94769 699 aaPredicted RBP16.39■□□□□ 0.21
DDR1-225ENST00000376568 TCEANC2Q96MN5 208 aa16.39■□□□□ 0.21
DDR1-225ENST00000376568 PPLO60437 1756 aa16.39■□□□□ 0.21
DDR1-225ENST00000376568 CDC45O75419 566 aa16.39■□□□□ 0.21
DDR1-225ENST00000376568 HAND2P61296 217 aa16.39■□□□□ 0.21
DDR1-225ENST00000376568 GNL2Q13823 731 aaKnown RBP16.39■□□□□ 0.21
DDR1-225ENST00000376568 INTS3Q68E01 1043 aaKnown RBP16.39■□□□□ 0.21
DDR1-225ENST00000376568 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 ITGA6P23229 1130 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 NEK4P51957 841 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 ANKRD18AQ8IVF6 992 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 PLCB2Q00722 1185 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 NBPF14Q5TI25 921 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
DDR1-225ENST00000376568 PALLDQ8WX93 1383 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 MINDY4BA8MYZ0 360 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
DDR1-225ENST00000376568 ERC1Q8IUD2 1116 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 ZNF521Q96K83 1311 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
DDR1-225ENST00000376568 SEC31BQ9NQW1 1179 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 OVOS2A0A0J9YW53 1432 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 OVOS2Q6IE36 1432 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 CD163L1Q9NR16 1453 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 ANKRD44Q8N8A2 993 aa16.37■□□□□ 0.21
DDR1-225ENST00000376568 BLMP54132 1417 aaPredicted RBP16.37■□□□□ 0.21
DDR1-225ENST00000376568 NEURL1BA8MQ27 555 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 ZKSCAN1P17029 563 aaPredicted RBP16.36■□□□□ 0.21
DDR1-225ENST00000376568 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 REC8O95072 547 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 TRIM34Q9BYJ4 488 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 ST5P78524 1137 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 ATP8B2P98198 1209 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 CCDC152Q4G0S7 254 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 CCDC82Q8N4S0 544 aa16.36■□□□□ 0.21
DDR1-225ENST00000376568 GPR101Q96P66 508 aaPredicted RBP16.36■□□□□ 0.21
DDR1-225ENST00000376568 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
DDR1-225ENST00000376568 ARHGAP45Q92619 1136 aa16.35■□□□□ 0.21
DDR1-225ENST00000376568 NBPF26B4DH59 902 aa16.35■□□□□ 0.21
DDR1-225ENST00000376568 ZNF853P0CG23 659 aa16.35■□□□□ 0.21
DDR1-225ENST00000376568 NBPF10Q6P3W6 841 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms