RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RAB11FIP3O75154 756 aa13.85□□□□□ -0.19
PDPN-202ENST00000376057 GCKRQ14397 625 aa13.85□□□□□ -0.19
PDPN-202ENST00000376057 FAM98CQ17RN3 349 aaKnown RBP13.85□□□□□ -0.19
PDPN-202ENST00000376057 ANKRD36CQ5JPF3 1778 aa13.85□□□□□ -0.19
PDPN-202ENST00000376057 RGL2O15211 777 aa13.84□□□□□ -0.19
PDPN-202ENST00000376057 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
PDPN-202ENST00000376057 RGS3P49796 1198 aa13.84□□□□□ -0.19
PDPN-202ENST00000376057 MEX3CQ5U5Q3 659 aaKnown RBP13.84□□□□□ -0.19
PDPN-202ENST00000376057 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
PDPN-202ENST00000376057 NOP58Q9Y2X3 529 aaKnown RBP13.84□□□□□ -0.19
PDPN-202ENST00000376057 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
PDPN-202ENST00000376057 ANKRD45Q5TZF3 282 aa13.83□□□□□ -0.19
PDPN-202ENST00000376057 DNAJC10Q8IXB1 793 aa13.83□□□□□ -0.19
PDPN-202ENST00000376057 C9orf78Q9NZ63 289 aaPredicted RBP13.83□□□□□ -0.19
PDPN-202ENST00000376057 A1BGP04217 495 aa13.83□□□□□ -0.2
PDPN-202ENST00000376057 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
PDPN-202ENST00000376057 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.2
PDPN-202ENST00000376057 HSP90AB4PQ58FF6 505 aa13.83□□□□□ -0.2
PDPN-202ENST00000376057 SKAP1Q86WV1 359 aa13.83□□□□□ -0.2
PDPN-202ENST00000376057 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
PDPN-202ENST00000376057 OSBPL3Q9H4L5 887 aa13.82□□□□□ -0.2
PDPN-202ENST00000376057 LY75O60449 1722 aa13.82□□□□□ -0.2
PDPN-202ENST00000376057 ERVV-1B6SEH8 477 aa13.82□□□□□ -0.2
PDPN-202ENST00000376057 BMP2KLQ5H9B9 411 aa13.82□□□□□ -0.2
PDPN-202ENST00000376057 PNMA6EA0A0J9YXQ4 647 aa13.82□□□□□ -0.2
PDPN-202ENST00000376057 BTAF1O14981 1849 aa13.81□□□□□ -0.2
PDPN-202ENST00000376057 H7C1W4 665 aa13.81□□□□□ -0.2
PDPN-202ENST00000376057 CASP7P55210 303 aa13.81□□□□□ -0.2
PDPN-202ENST00000376057 CWF19L2Q2TBE0 894 aaKnown RBP13.81□□□□□ -0.2
PDPN-202ENST00000376057 MYD88Q99836 296 aa13.81□□□□□ -0.2
PDPN-202ENST00000376057 ISCA1Q9BUE6 129 aa13.81□□□□□ -0.2
PDPN-202ENST00000376057 PALLDQ8WX93 1383 aa13.81□□□□□ -0.2
PDPN-202ENST00000376057 RABL6Q3YEC7 729 aaPredicted RBP13.81□□□□□ -0.2
PDPN-202ENST00000376057 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
PDPN-202ENST00000376057 RBM42Q9BTD8 480 aaKnown RBP13.81□□□□□ -0.2
PDPN-202ENST00000376057 KAZALD1Q96I82 304 aa13.8□□□□□ -0.2
PDPN-202ENST00000376057 LNPKQ9C0E8 428 aa13.8□□□□□ -0.2
PDPN-202ENST00000376057 AOX1Q06278 1338 aa13.8□□□□□ -0.2
PDPN-202ENST00000376057 MAP3K15Q6ZN16 1313 aa13.8□□□□□ -0.2
PDPN-202ENST00000376057 EIF5BO60841 1220 aaKnown RBP13.8□□□□□ -0.2
PDPN-202ENST00000376057 HSP90AB3PQ58FF7 597 aa13.8□□□□□ -0.2
PDPN-202ENST00000376057 TUBGCP6Q96RT7 1819 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 SALL3Q9BXA9 1300 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 SIK1P57059 783 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 TCIRG1Q13488 830 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 TTLL7Q6ZT98 887 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 PLEKHM2Q8IWE5 1019 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 KIF6Q6ZMV9 814 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
PDPN-202ENST00000376057 BCORQ6W2J9 1755 aa13.79□□□□□ -0.2
PDPN-202ENST00000376057 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
PDPN-202ENST00000376057 CWC25Q9NXE8 425 aaPredicted RBP13.78□□□□□ -0.2
PDPN-202ENST00000376057 NUP98P52948 1817 aa13.78□□□□□ -0.2
PDPN-202ENST00000376057 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
PDPN-202ENST00000376057 GIGYF2Q6Y7W6 1299 aaKnown RBP13.78□□□□□ -0.2
PDPN-202ENST00000376057 ERC1Q8IUD2 1116 aa13.78□□□□□ -0.2
PDPN-202ENST00000376057 SYTL4Q96C24 671 aaPredicted RBP13.78□□□□□ -0.2
PDPN-202ENST00000376057 SUCLG2Q96I99 432 aa13.78□□□□□ -0.2
PDPN-202ENST00000376057 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
PDPN-202ENST00000376057 STAP2Q9UGK3 403 aa13.78□□□□□ -0.2
PDPN-202ENST00000376057 SRGAP3O43295 1099 aa13.77□□□□□ -0.2
PDPN-202ENST00000376057 PLA2G12BQ9BX93 195 aa13.77□□□□□ -0.2
PDPN-202ENST00000376057 CNTNAP4Q9C0A0 1308 aa13.77□□□□□ -0.2
PDPN-202ENST00000376057 RC3H1Q5TC82 1133 aaKnown RBP13.77□□□□□ -0.21
PDPN-202ENST00000376057 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
PDPN-202ENST00000376057 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
PDPN-202ENST00000376057 ATP6V1AP38606 617 aa13.76□□□□□ -0.21
PDPN-202ENST00000376057 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
PDPN-202ENST00000376057 KIF1BPQ96EK5 621 aa13.76□□□□□ -0.21
PDPN-202ENST00000376057 ACSBG1Q96GR2 724 aa13.76□□□□□ -0.21
PDPN-202ENST00000376057 CDHR2Q9BYE9 1310 aa13.76□□□□□ -0.21
PDPN-202ENST00000376057 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
PDPN-202ENST00000376057 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
PDPN-202ENST00000376057 TAF1LQ8IZX4 1826 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
PDPN-202ENST00000376057 COPRSQ9NQ92 184 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 MYH14Q7Z406 1995 aaKnown RBP13.75□□□□□ -0.21
PDPN-202ENST00000376057 A0A087WZG4 1122 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 KCNQ2O43526 872 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 PCCAP05165 728 aaPredicted RBP13.75□□□□□ -0.21
PDPN-202ENST00000376057 TTC22Q5TAA0 569 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 AK7Q96M32 723 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 ZBTB1Q9Y2K1 713 aa13.75□□□□□ -0.21
PDPN-202ENST00000376057 CRKLP46109 303 aaKnown RBP13.74□□□□□ -0.21
PDPN-202ENST00000376057 ITPK1Q13572 414 aa13.74□□□□□ -0.21
PDPN-202ENST00000376057 BRWD3Q6RI45 1802 aa13.74□□□□□ -0.21
PDPN-202ENST00000376057 SCN7AQ01118 1682 aa13.74□□□□□ -0.21
PDPN-202ENST00000376057 RFX5P48382 616 aaPredicted RBP13.73□□□□□ -0.21
PDPN-202ENST00000376057 FOXO4P98177 505 aa13.73□□□□□ -0.21
PDPN-202ENST00000376057 RHPN1Q8TCX5 695 aa13.73□□□□□ -0.21
PDPN-202ENST00000376057 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
PDPN-202ENST00000376057 EXOC6BQ9Y2D4 811 aa13.73□□□□□ -0.21
PDPN-202ENST00000376057 LAMB2P55268 1798 aa13.73□□□□□ -0.21
PDPN-202ENST00000376057 SURF6O75683 361 aaKnown RBP13.73□□□□□ -0.21
PDPN-202ENST00000376057 ZNF34Q8IZ26 560 aa13.73□□□□□ -0.21
PDPN-202ENST00000376057 ZBTB38Q8NAP3 1195 aaPredicted RBP13.73□□□□□ -0.21
PDPN-202ENST00000376057 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms