RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 RAPGEF4Q8WZA2 1011 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 TAOK2Q9UL54 1235 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 KIAA0556O60303 1618 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 SKILP12757 684 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 PIK3R4Q99570 1358 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 SF3B2Q13435 895 aaKnown RBP10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 C8orf76Q96K31 380 aa10.17□□□□□ -0.78
SHROOM4-202ENST00000376020 PPP1R9BQ96SB3 815 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 SWAP70Q9UH65 585 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 A0A1B0GUL7 405 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 MPHOSPH8Q99549 860 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 ERICH4A6NGS2 130 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 HOXA7P31268 230 aaPredicted RBP10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 LRRFIP2Q9Y608 721 aaKnown RBP10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 SOX12O15370 315 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 TRIM14Q14142 442 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 WASHC4Q2M389 1173 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 EIF5P55010 431 aaKnown RBP10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 CNGA4Q8IV77 575 aa10.16□□□□□ -0.78
SHROOM4-202ENST00000376020 BRAPQ7Z569 592 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 TSGA10Q9BZW7 698 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 AMOTQ4VCS5 1084 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 PRG4Q92954 1404 aaPredicted RBP10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 TCHHQ07283 1943 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 HMGB1P1B2RPK0 211 aaPredicted RBP10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 AMPD3Q01432 767 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 CCDC69A6NI79 296 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 SSFA2P28290 1259 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 BABAM1Q9NWV8 329 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 KRT83P78385 493 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 DNAJC21Q5F1R6 531 aaKnown RBP10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 C6orf163Q5TEZ5 329 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 CCDC102BQ68D86 513 aa10.15□□□□□ -0.78
SHROOM4-202ENST00000376020 URI1O94763 535 aaPredicted RBP10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 POTEJP0CG39 1038 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 TICAM2Q86XR7 235 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 CCDC12Q8WUD4 166 aaPredicted RBP10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 ARHGEF11O15085 1522 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 CTAGE15A4D2H0 777 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 CTAGE8P0CG41 777 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 TTC31Q49AM3 519 aaPredicted RBP10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 CTAGE6Q86UF2 777 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 CTAGE4Q8IX94 777 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 USH1CQ9Y6N9 552 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 CCDC61Q9Y6R9 512 aa10.15□□□□□ -0.79
SHROOM4-202ENST00000376020 ZFYP08048 801 aaPredicted RBP10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 PLCD4Q9BRC7 762 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 LLPHQ9BRT6 129 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 TRAPPC8Q9Y2L5 1435 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 KRT86O43790 486 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 ENOX2Q16206 610 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 TMTC2Q8N394 836 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 PDE4CQ08493 712 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 VPS53Q5VIR6 699 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 TTC37Q6PGP7 1564 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 CFAP74Q9C0B2 1584 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 DNAI2Q9GZS0 605 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 MED4Q9NPJ6 270 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 ECHDC1Q9NTX5 307 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 HYPKQ9NX55 129 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 FSD2A1L4K1 749 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 LAMC1P11047 1609 aa10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 RSRC1Q96IZ7 334 aaKnown RBP10.14□□□□□ -0.79
SHROOM4-202ENST00000376020 LMAN1P49257 510 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 CYLC1P35663 651 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 AIMP1Q12904 312 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 TSR2Q969E8 191 aaKnown RBP10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 KDM4AO75164 1064 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 CETN1Q12798 172 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 TTF1Q15361 905 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 CLGNO14967 610 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 AACSQ86V21 672 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 UBAC1Q9BSL1 405 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 MAP2K1Q02750 393 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 ANKRD44Q8N8A2 993 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 SETSIPP0DME0 302 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 NEFHP12036 1026 aa10.13□□□□□ -0.79
SHROOM4-202ENST00000376020 ARHGAP31Q2M1Z3 1444 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 EIF2S2P20042 333 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 HSF2BPO75031 334 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 PPP2R5EQ16537 467 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 CCDC38Q502W7 563 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 STK11IPQ8N1F8 1099 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 PPIP5K1Q6PFW1 1433 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 EIF4G3O43432 1585 aaKnown RBP10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 IFT74Q96LB3 600 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 TSG101Q99816 390 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 CAPN2P17655 700 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 GTF2F1P35269 517 aaKnown RBP eCLIP10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 IQSEC3Q9UPP2 1182 aaPredicted RBP10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 FAM135BQ49AJ0 1406 aa10.12□□□□□ -0.79
SHROOM4-202ENST00000376020 DCTPP1Q9H773 170 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms