RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 UBR2Q8IWV8 1755 aa21.76■■□□□ 1.07
CLIC1-208ENST00000375784 COL15A1P39059 1388 aa21.76■■□□□ 1.07
CLIC1-208ENST00000375784 NFKBIEO00221 500 aa21.76■■□□□ 1.07
CLIC1-208ENST00000375784 C2CD5Q86YS7 1000 aa21.76■■□□□ 1.07
CLIC1-208ENST00000375784 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
CLIC1-208ENST00000375784 NRXN2Q9P2S2 1712 aa21.75■■□□□ 1.07
CLIC1-208ENST00000375784 A0A087WZG4 1122 aa21.75■■□□□ 1.07
CLIC1-208ENST00000375784 CCDC184Q52MB2 194 aa21.75■■□□□ 1.07
CLIC1-208ENST00000375784 USP16Q9Y5T5 823 aa21.75■■□□□ 1.07
CLIC1-208ENST00000375784 H0YIN7 160 aa21.74■■□□□ 1.07
CLIC1-208ENST00000375784 DPY19L2Q6NUT2 758 aa21.74■■□□□ 1.07
CLIC1-208ENST00000375784 BABAM1Q9NWV8 329 aa21.74■■□□□ 1.07
CLIC1-208ENST00000375784 DLG5Q8TDM6 1919 aa21.74■■□□□ 1.07
CLIC1-208ENST00000375784 EIF5P55010 431 aaKnown RBP21.73■■□□□ 1.07
CLIC1-208ENST00000375784 TSPYL4Q9UJ04 414 aa21.73■■□□□ 1.07
CLIC1-208ENST00000375784 AFDNP55196 1824 aaKnown RBP21.73■■□□□ 1.07
CLIC1-208ENST00000375784 A1BGP04217 495 aa21.72■■□□□ 1.07
CLIC1-208ENST00000375784 IL6STP40189 918 aaPredicted RBP21.72■■□□□ 1.07
CLIC1-208ENST00000375784 ZNF330Q9Y3S2 320 aaPredicted RBP21.72■■□□□ 1.07
CLIC1-208ENST00000375784 CARMIL3Q8ND23 1372 aa21.72■■□□□ 1.07
CLIC1-208ENST00000375784 DLEC1Q9Y238 1755 aa21.71■■□□□ 1.07
CLIC1-208ENST00000375784 APAF1O14727 1248 aa21.71■■□□□ 1.07
CLIC1-208ENST00000375784 EIF4A1P60842 406 aaKnown RBP21.71■■□□□ 1.07
CLIC1-208ENST00000375784 TRIM35Q9UPQ4 493 aa21.71■■□□□ 1.07
CLIC1-208ENST00000375784 TIAM2Q8IVF5 1701 aa21.7■■□□□ 1.06
CLIC1-208ENST00000375784 PRAMEF22A3QJZ6 481 aa21.7■■□□□ 1.06
CLIC1-208ENST00000375784 CREBZFQ9NS37 354 aa21.69■■□□□ 1.06
CLIC1-208ENST00000375784 ERFEQ4G0M1 354 aa21.68■■□□□ 1.06
CLIC1-208ENST00000375784 BICDL1Q6ZP65 573 aa21.68■■□□□ 1.06
CLIC1-208ENST00000375784 C21orf2O43822 256 aa21.67■■□□□ 1.06
CLIC1-208ENST00000375784 CHADLQ6NUI6 762 aa21.67■■□□□ 1.06
CLIC1-208ENST00000375784 ZNF622Q969S3 477 aaKnown RBP eCLIP21.67■■□□□ 1.06
CLIC1-208ENST00000375784 PDZRN3Q9UPQ7 1066 aa21.67■■□□□ 1.06
CLIC1-208ENST00000375784 LAS1LQ9Y4W2 734 aaKnown RBP21.67■■□□□ 1.06
CLIC1-208ENST00000375784 CHL1O00533 1208 aa21.66■■□□□ 1.06
CLIC1-208ENST00000375784 CALD1Q05682 793 aaKnown RBP21.66■■□□□ 1.06
CLIC1-208ENST00000375784 BRIP1Q9BX63 1249 aa21.66■■□□□ 1.06
CLIC1-208ENST00000375784 ZNF219Q9P2Y4 722 aaPredicted RBP21.66■■□□□ 1.06
CLIC1-208ENST00000375784 MKRN1Q9UHC7 482 aaKnown RBP21.66■■□□□ 1.06
CLIC1-208ENST00000375784 TBC1D2BQ9UPU7 963 aa21.66■■□□□ 1.06
CLIC1-208ENST00000375784 PDE6BP35913 854 aa21.65■■□□□ 1.06
CLIC1-208ENST00000375784 TBC1D9BQ66K14 1250 aa21.64■■□□□ 1.05
CLIC1-208ENST00000375784 CCDC88AQ3V6T2 1871 aa21.64■■□□□ 1.05
CLIC1-208ENST00000375784 LTBP3Q9NS15 1303 aa21.63■■□□□ 1.05
CLIC1-208ENST00000375784 POTEIP0CG38 1075 aa21.63■■□□□ 1.05
CLIC1-208ENST00000375784 POTEJP0CG39 1038 aa21.63■■□□□ 1.05
CLIC1-208ENST00000375784 PIP4K2AP48426 406 aaPredicted RBP21.63■■□□□ 1.05
CLIC1-208ENST00000375784 DZIP3Q86Y13 1208 aaKnown RBP21.63■■□□□ 1.05
CLIC1-208ENST00000375784 CFAP44Q96MT7 982 aa21.63■■□□□ 1.05
CLIC1-208ENST00000375784 DDNO94850 711 aaPredicted RBP21.62■■□□□ 1.05
CLIC1-208ENST00000375784 PRR5LQ6MZQ0 368 aa21.62■■□□□ 1.05
CLIC1-208ENST00000375784 NBPF26B4DH59 902 aa21.61■■□□□ 1.05
CLIC1-208ENST00000375784 NBPF10Q6P3W6 841 aaKnown RBP21.61■■□□□ 1.05
CLIC1-208ENST00000375784 CCDC24Q8N4L8 307 aa21.61■■□□□ 1.05
CLIC1-208ENST00000375784 NBPF15Q8N660 670 aa21.61■■□□□ 1.05
CLIC1-208ENST00000375784 TAOK3Q9H2K8 898 aa21.61■■□□□ 1.05
CLIC1-208ENST00000375784 KDM3BQ7LBC6 1761 aa21.61■■□□□ 1.05
CLIC1-208ENST00000375784 FOXN1O15353 648 aa21.6■■□□□ 1.05
CLIC1-208ENST00000375784 CNTNAP1P78357 1384 aa21.6■■□□□ 1.05
CLIC1-208ENST00000375784 CAMTA2O94983 1202 aa21.59■■□□□ 1.05
CLIC1-208ENST00000375784 EIF2S2P20042 333 aaKnown RBP21.59■■□□□ 1.05
CLIC1-208ENST00000375784 GNAI1P63096 354 aa21.59■■□□□ 1.05
CLIC1-208ENST00000375784 CNKSR1Q969H4 720 aa21.59■■□□□ 1.05
CLIC1-208ENST00000375784 ERBB4Q15303 1308 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 ANKRD31Q8N7Z5 1873 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 CLEC4GQ6UXB4 293 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 FAM9BQ8IZU0 186 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 PRDM10Q9NQV6 1147 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 IFT57Q9NWB7 429 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 ZNF652Q9Y2D9 606 aa21.58■■□□□ 1.05
CLIC1-208ENST00000375784 FER1L6Q2WGJ9 1857 aa21.58■■□□□ 1.04
CLIC1-208ENST00000375784 PASKQ96RG2 1323 aa21.57■■□□□ 1.04
CLIC1-208ENST00000375784 CCDC27Q2M243 656 aa21.57■■□□□ 1.04
CLIC1-208ENST00000375784 NCBP3Q53F19 620 aaKnown RBP21.57■■□□□ 1.04
CLIC1-208ENST00000375784 STYK1Q6J9G0 422 aa21.57■■□□□ 1.04
CLIC1-208ENST00000375784 DICER1Q9UPY3 1922 aaKnown RBP21.57■■□□□ 1.04
CLIC1-208ENST00000375784 IQCA1LA6NCM1 817 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 RGL2O15211 777 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 ZNF853P0CG23 659 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 MYL6BP14649 208 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 SOGA3Q5TF21 947 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 PRPF40BQ6NWY9 871 aaKnown RBP21.56■■□□□ 1.04
CLIC1-208ENST00000375784 LDHDQ86WU2 507 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 SETDB2Q96T68 719 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 MBIPQ9NS73 344 aa21.56■■□□□ 1.04
CLIC1-208ENST00000375784 COL11A2P13942 1736 aaPredicted RBP21.55■■□□□ 1.04
CLIC1-208ENST00000375784 SRGNP10124 158 aa21.55■■□□□ 1.04
CLIC1-208ENST00000375784 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
CLIC1-208ENST00000375784 L3MBTL3Q96JM7 780 aaPredicted RBP21.55■■□□□ 1.04
CLIC1-208ENST00000375784 HOXB7P09629 217 aa21.54■■□□□ 1.04
CLIC1-208ENST00000375784 CTCFP49711 727 aaPredicted RBP21.54■■□□□ 1.04
CLIC1-208ENST00000375784 WWC1Q8IX03 1113 aa21.54■■□□□ 1.04
CLIC1-208ENST00000375784 MASTLQ96GX5 879 aa21.54■■□□□ 1.04
CLIC1-208ENST00000375784 TAF1DQ9H5J8 278 aaPredicted RBP21.54■■□□□ 1.04
CLIC1-208ENST00000375784 NPHP1O15259 732 aa21.53■■□□□ 1.04
CLIC1-208ENST00000375784 VEGFBP49765 207 aa21.53■■□□□ 1.04
CLIC1-208ENST00000375784 ST5P78524 1137 aa21.53■■□□□ 1.04
CLIC1-208ENST00000375784 KIF6Q6ZMV9 814 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms