RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 KDRP35968 1356 aa17.01■□□□□ 0.31
CLCNKA-202ENST00000375692 PHF14O94880 888 aa17■□□□□ 0.31
CLCNKA-202ENST00000375692 RASEFQ8IZ41 740 aa17■□□□□ 0.31
CLCNKA-202ENST00000375692 TSC1Q92574 1164 aa17■□□□□ 0.31
CLCNKA-202ENST00000375692 TTC12Q9H892 705 aaPredicted RBP17■□□□□ 0.31
CLCNKA-202ENST00000375692 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
CLCNKA-202ENST00000375692 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
CLCNKA-202ENST00000375692 CPA1P15085 419 aa17■□□□□ 0.31
CLCNKA-202ENST00000375692 SURF6O75683 361 aaKnown RBP16.99■□□□□ 0.31
CLCNKA-202ENST00000375692 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
CLCNKA-202ENST00000375692 IL17RAQ96F46 866 aa16.99■□□□□ 0.31
CLCNKA-202ENST00000375692 MAP7D2Q96T17 732 aa16.99■□□□□ 0.31
CLCNKA-202ENST00000375692 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
CLCNKA-202ENST00000375692 ADCY5O95622 1261 aa16.99■□□□□ 0.31
CLCNKA-202ENST00000375692 AK2P54819 239 aa16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 PPP1R42Q7Z4L9 355 aa16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 PHAXQ9H814 394 aaKnown RBP16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 SYT1P21579 422 aa16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 CCDC183Q5T5S1 534 aa16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
CLCNKA-202ENST00000375692 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
CLCNKA-202ENST00000375692 PI4K2BQ8TCG2 481 aa16.97■□□□□ 0.31
CLCNKA-202ENST00000375692 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
CLCNKA-202ENST00000375692 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
CLCNKA-202ENST00000375692 SGSM2O43147 1006 aa16.97■□□□□ 0.31
CLCNKA-202ENST00000375692 FIBPO43427 364 aa16.97■□□□□ 0.31
CLCNKA-202ENST00000375692 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 CWC27Q6UX04 472 aaKnown RBP16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 IL17REQ8NFR9 667 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 SSH3Q8TE77 659 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 TTC14Q96N46 770 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 STX6O43752 255 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 UVSSAQ2YD98 709 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 FAM184AQ8NB25 1140 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 LSG1Q9H089 658 aaKnown RBP16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 ERBB3P21860 1342 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 RAD50Q92878 1312 aa16.96■□□□□ 0.31
CLCNKA-202ENST00000375692 LARGE1O95461 756 aa16.95■□□□□ 0.3
CLCNKA-202ENST00000375692 GIMAP6Q6P9H5 292 aa16.95■□□□□ 0.3
CLCNKA-202ENST00000375692 RGPD2P0DJD1 1756 aa16.95■□□□□ 0.3
CLCNKA-202ENST00000375692 GNAT3A8MTJ3 354 aa16.95■□□□□ 0.3
CLCNKA-202ENST00000375692 PIBF1Q8WXW3 757 aa16.95■□□□□ 0.3
CLCNKA-202ENST00000375692 FAM177BA6PVY3 158 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 AOX1Q06278 1338 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 RGPD5Q99666 1765 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 SRGAP3O43295 1099 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 UBE2HP62256 183 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 DDX54Q8TDD1 881 aaKnown RBP16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
CLCNKA-202ENST00000375692 F13A1P00488 732 aa16.93■□□□□ 0.3
CLCNKA-202ENST00000375692 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
CLCNKA-202ENST00000375692 MYRIPQ8NFW9 859 aa16.93■□□□□ 0.3
CLCNKA-202ENST00000375692 AP5Z1O43299 807 aa16.93■□□□□ 0.3
CLCNKA-202ENST00000375692 CASTP20810 708 aaKnown RBP16.93■□□□□ 0.3
CLCNKA-202ENST00000375692 KDM4AO75164 1064 aa16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 CSB-PGBD3P0DP91 1061 aa16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 DNM1Q05193 864 aaKnown RBP16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 HDGFL1Q5TGJ6 251 aa16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 CCDC83Q8IWF9 413 aa16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 RAB11FIP3O75154 756 aa16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 PHRF1Q9P1Y6 1649 aaKnown RBP16.92■□□□□ 0.3
CLCNKA-202ENST00000375692 POLA2Q14181 598 aa16.91■□□□□ 0.3
CLCNKA-202ENST00000375692 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.91■□□□□ 0.3
CLCNKA-202ENST00000375692 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
CLCNKA-202ENST00000375692 ADCK5Q3MIX3 580 aa16.91■□□□□ 0.3
CLCNKA-202ENST00000375692 CNTROBQ8N137 903 aa16.91■□□□□ 0.3
CLCNKA-202ENST00000375692 ROBO1Q9Y6N7 1651 aa16.91■□□□□ 0.3
CLCNKA-202ENST00000375692 EPB41L2O43491 1005 aaKnown RBP16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 GJB2P29033 226 aa16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 PTH1RQ03431 593 aa16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 PRDM10Q9NQV6 1147 aa16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 HYPKQ9NX55 129 aa16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 HTATSF1O43719 755 aaKnown RBP16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 LETM1O95202 739 aaPredicted RBP16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 KIF1BPQ96EK5 621 aa16.9■□□□□ 0.3
CLCNKA-202ENST00000375692 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.3
CLCNKA-202ENST00000375692 FUCA2Q9BTY2 467 aa16.89■□□□□ 0.3
CLCNKA-202ENST00000375692 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
CLCNKA-202ENST00000375692 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
CLCNKA-202ENST00000375692 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
CLCNKA-202ENST00000375692 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
CLCNKA-202ENST00000375692 ANXA1P04083 346 aa16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 PRPF40BQ6NWY9 871 aaKnown RBP16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 SPC24Q8NBT2 197 aa16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 JAKMIP1Q96N16 626 aaKnown RBP16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 CPDO75976 1380 aa16.88■□□□□ 0.29
CLCNKA-202ENST00000375692 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms