RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 DNAI1Q9UI46 699 aa22.84■■□□□ 1.25
COL15A1-201ENST00000375001 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
COL15A1-201ENST00000375001 F6X3S4 739 aa22.83■■□□□ 1.25
COL15A1-201ENST00000375001 RAB11FIP3O75154 756 aa22.83■■□□□ 1.25
COL15A1-201ENST00000375001 PRPF4BQ13523 1007 aaKnown RBP22.83■■□□□ 1.25
COL15A1-201ENST00000375001 MSL1Q68DK7 614 aa22.83■■□□□ 1.25
COL15A1-201ENST00000375001 ISM2Q6H9L7 571 aa22.83■■□□□ 1.25
COL15A1-201ENST00000375001 GIMAP6Q6P9H5 292 aa22.83■■□□□ 1.25
COL15A1-201ENST00000375001 CCDC97Q96F63 343 aaPredicted RBP22.83■■□□□ 1.25
COL15A1-201ENST00000375001 TSG101Q99816 390 aa22.83■■□□□ 1.25
COL15A1-201ENST00000375001 CCDC160A6NGH7 325 aa22.83■■□□□ 1.24
COL15A1-201ENST00000375001 RPGRIP1LQ68CZ1 1315 aa22.83■■□□□ 1.24
COL15A1-201ENST00000375001 SKILP12757 684 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 KIF1BPQ96EK5 621 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 ABCC11Q96J66 1382 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 BMP2KLQ5H9B9 411 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 CCDC186Q7Z3E2 898 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 ZKSCAN5Q9Y2L8 839 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 DISP3Q9P2K9 1392 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 CAMSAP2Q08AD1 1489 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 ZBTB9Q96C00 473 aa22.82■■□□□ 1.24
COL15A1-201ENST00000375001 FSD2A1L4K1 749 aa22.81■■□□□ 1.24
COL15A1-201ENST00000375001 CLGNO14967 610 aa22.81■■□□□ 1.24
COL15A1-201ENST00000375001 CCDC96Q2M329 555 aa22.81■■□□□ 1.24
COL15A1-201ENST00000375001 STX6O43752 255 aa22.81■■□□□ 1.24
COL15A1-201ENST00000375001 ATF3P18847 181 aa22.8■■□□□ 1.24
COL15A1-201ENST00000375001 ZNF76P36508 570 aa22.8■■□□□ 1.24
COL15A1-201ENST00000375001 U3KPZ7 1027 aaPredicted RBP22.8■■□□□ 1.24
COL15A1-201ENST00000375001 USP5P45974 858 aa22.8■■□□□ 1.24
COL15A1-201ENST00000375001 ARHGEF11O15085 1522 aa22.8■■□□□ 1.24
COL15A1-201ENST00000375001 GLRX3O76003 335 aaKnown RBP22.8■■□□□ 1.24
COL15A1-201ENST00000375001 UBE2HP62256 183 aa22.8■■□□□ 1.24
COL15A1-201ENST00000375001 TTC12Q9H892 705 aaPredicted RBP22.8■■□□□ 1.24
COL15A1-201ENST00000375001 PCDHB15Q9Y5E8 787 aa22.8■■□□□ 1.24
COL15A1-201ENST00000375001 MAPKBP1O60336 1514 aa22.8■■□□□ 1.24
COL15A1-201ENST00000375001 CTAGE15A4D2H0 777 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 BTBD11A6QL63 1104 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 CTAGE8P0CG41 777 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 C8orf34Q49A92 452 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 CTAGE6Q86UF2 777 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 CTAGE4Q8IX94 777 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 GJB2P29033 226 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 MTIF2P46199 727 aaKnown RBP22.79■■□□□ 1.24
COL15A1-201ENST00000375001 DRC1Q96MC2 740 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 RBM42Q9BTD8 480 aaKnown RBP22.79■■□□□ 1.24
COL15A1-201ENST00000375001 CEP126Q9P2H0 1117 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 EBAG9O00559 213 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 UBA5Q9GZZ9 404 aa22.79■■□□□ 1.24
COL15A1-201ENST00000375001 NOP2P46087 812 aaKnown RBP22.78■■□□□ 1.24
COL15A1-201ENST00000375001 RASSF4Q9H2L5 321 aa22.78■■□□□ 1.24
COL15A1-201ENST00000375001 HOMER2Q9NSB8 354 aa22.78■■□□□ 1.24
COL15A1-201ENST00000375001 IDH1O75874 414 aaKnown RBP22.78■■□□□ 1.24
COL15A1-201ENST00000375001 SLU7O95391 586 aaKnown RBP22.78■■□□□ 1.24
COL15A1-201ENST00000375001 DAAM2Q86T65 1068 aa22.78■■□□□ 1.24
COL15A1-201ENST00000375001 OTUD6BQ8N6M0 293 aa22.78■■□□□ 1.24
COL15A1-201ENST00000375001 TATP17735 454 aaPredicted RBP22.78■■□□□ 1.24
COL15A1-201ENST00000375001 CCDC82Q8N4S0 544 aa22.77■■□□□ 1.24
COL15A1-201ENST00000375001 SPINK5Q9NQ38 1064 aaPredicted RBP22.77■■□□□ 1.24
COL15A1-201ENST00000375001 SCLT1Q96NL6 688 aa22.77■■□□□ 1.24
COL15A1-201ENST00000375001 VPS18Q9P253 973 aa22.77■■□□□ 1.24
COL15A1-201ENST00000375001 GNAT3A8MTJ3 354 aa22.76■■□□□ 1.23
COL15A1-201ENST00000375001 MYO1BO43795 1136 aa22.76■■□□□ 1.23
COL15A1-201ENST00000375001 FGFR1OPO95684 399 aaKnown RBP22.76■■□□□ 1.23
COL15A1-201ENST00000375001 CCDC121Q6ZUS5 278 aa22.76■■□□□ 1.23
COL15A1-201ENST00000375001 NUDT16Q96DE0 195 aaKnown RBP22.76■■□□□ 1.23
COL15A1-201ENST00000375001 EMILIN1Q9Y6C2 1016 aa22.76■■□□□ 1.23
COL15A1-201ENST00000375001 BOLA2Q9H3K6 86 aa22.76■■□□□ 1.23
COL15A1-201ENST00000375001 ADGRF5Q8IZF2 1346 aa22.76■■□□□ 1.23
COL15A1-201ENST00000375001 GBP6Q6ZN66 633 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 AIDAQ96BJ3 306 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 WAPLQ7Z5K2 1190 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 CEP83Q9Y592 693 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 CCDC141Q6ZP82 1450 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 PHACTR2O75167 634 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 CAVIN2O95810 425 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 CCT2P78371 535 aaKnown RBP22.75■■□□□ 1.23
COL15A1-201ENST00000375001 PUS7Q96PZ0 661 aaKnown RBP22.75■■□□□ 1.23
COL15A1-201ENST00000375001 CTNNA2P26232 953 aa22.75■■□□□ 1.23
COL15A1-201ENST00000375001 CABP4P57796 275 aa22.74■■□□□ 1.23
COL15A1-201ENST00000375001 MPHOSPH8Q99549 860 aa22.74■■□□□ 1.23
COL15A1-201ENST00000375001 CCDC61Q9Y6R9 512 aa22.74■■□□□ 1.23
COL15A1-201ENST00000375001 CKAP4Q07065 602 aaKnown RBP22.74■■□□□ 1.23
COL15A1-201ENST00000375001 NSRP1Q9H0G5 558 aaKnown RBP22.74■■□□□ 1.23
COL15A1-201ENST00000375001 NME9Q86XW9 330 aa22.74■■□□□ 1.23
COL15A1-201ENST00000375001 CCDC155Q8N6L0 562 aa22.74■■□□□ 1.23
COL15A1-201ENST00000375001 RAPGEF3O95398 923 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 TSHZ3Q63HK5 1081 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 SMAP1Q8IYB5 467 aaPredicted RBP22.73■■□□□ 1.23
COL15A1-201ENST00000375001 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 EHBP1Q8NDI1 1231 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 A0A1W2PRG0 241 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 OPA1O60313 960 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 MXRA7P84157 204 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 PHAXQ9H814 394 aaKnown RBP22.73■■□□□ 1.23
COL15A1-201ENST00000375001 SPG7Q9UQ90 795 aa22.73■■□□□ 1.23
COL15A1-201ENST00000375001 ANKRD18BA2A2Z9 1011 aa22.72■■□□□ 1.23
COL15A1-201ENST00000375001 UBASH3AP57075 661 aa22.72■■□□□ 1.23
COL15A1-201ENST00000375001 NAA25Q14CX7 972 aa22.72■■□□□ 1.23
COL15A1-201ENST00000375001 PAIP2Q9BPZ3 127 aaKnown RBP22.72■■□□□ 1.23
COL15A1-201ENST00000375001 ANO6Q4KMQ2 910 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms