RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 FAM177BA6PVY3 158 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 RLBP1P12271 317 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 METTL24Q5JXM2 366 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 CFAP43Q8NDM7 1665 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 LRP2BPQ9P2M1 347 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 GOLGA8BA8MQT2 603 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 PRIM1P49642 420 aaKnown RBP24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 SKIDA1Q1XH10 827 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 TOM1L2Q6ZVM7 507 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 ITSN2Q9NZM3 1697 aa24.55■■□□□ 1.52
TGFBR1-202ENST00000374994 MEIS3Q99687 375 aa24.54■■□□□ 1.52
TGFBR1-202ENST00000374994 RNF41Q9H4P4 317 aaPredicted RBP24.54■■□□□ 1.52
TGFBR1-202ENST00000374994 ZMYND15Q9H091 742 aa24.54■■□□□ 1.52
TGFBR1-202ENST00000374994 RAI14Q9P0K7 980 aa24.54■■□□□ 1.52
TGFBR1-202ENST00000374994 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
TGFBR1-202ENST00000374994 CD109Q6YHK3 1445 aa24.53■■□□□ 1.52
TGFBR1-202ENST00000374994 COL17A1Q9UMD9 1497 aaPredicted RBP24.53■■□□□ 1.52
TGFBR1-202ENST00000374994 NAPBQ9H115 298 aa24.53■■□□□ 1.52
TGFBR1-202ENST00000374994 SLC12A7Q9Y666 1083 aa24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 IGHMBP2P38935 993 aaKnown RBP24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 ANKLE2Q86XL3 938 aa24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 CNPY2Q9Y2B0 182 aa24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 POGZQ7Z3K3 1410 aa24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 SHANK2Q9UPX8 1470 aa24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 STK11IPQ8N1F8 1099 aa24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 SRRTQ9BXP5 876 aaKnown RBP24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 USO1O60763 962 aaKnown RBP24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 CCDC102BQ68D86 513 aa24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 ZRSR2Q15696 482 aaKnown RBP24.52■■□□□ 1.52
TGFBR1-202ENST00000374994 FGFR1OPO95684 399 aaKnown RBP24.51■■□□□ 1.51
TGFBR1-202ENST00000374994 SSRP1Q08945 709 aaKnown RBP24.51■■□□□ 1.51
TGFBR1-202ENST00000374994 MAP3K12Q12852 859 aa24.51■■□□□ 1.51
TGFBR1-202ENST00000374994 CCDC186Q7Z3E2 898 aa24.51■■□□□ 1.51
TGFBR1-202ENST00000374994 CENPHQ9H3R5 247 aa24.51■■□□□ 1.51
TGFBR1-202ENST00000374994 STARD3NLO95772 234 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 GUCY1B3Q02153 619 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 ZMYM4Q5VZL5 1548 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 RAPGEF6Q8TEU7 1601 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 FAM83GA6ND36 823 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 GOLGA8AA7E2F4 631 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 SKILP12757 684 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 KCNG4Q8TDN1 519 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 KDM5BQ9UGL1 1544 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 ORC3Q9UBD5 711 aaPredicted RBP24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 USP16Q9Y5T5 823 aa24.5■■□□□ 1.51
TGFBR1-202ENST00000374994 ALDH1L1O75891 902 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 PAFAH1B1P43034 410 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 ZNF287Q9HBT7 754 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 NPHP3Q7Z494 1330 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 ZMYM3Q14202 1370 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 VAMP4O75379 141 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 SEC24BO95487 1268 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 KLHL10Q6JEL2 608 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 TTC41PQ6P2S7 1318 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 CTCFLQ8NI51 663 aaPredicted RBP24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 TERF1P54274 439 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 ANO6Q4KMQ2 910 aa24.49■■□□□ 1.51
TGFBR1-202ENST00000374994 GTPBP4Q9BZE4 634 aaKnown RBP24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 IARSP41252 1262 aaKnown RBP24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 CCT2P78371 535 aaKnown RBP24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 ZHX3Q9H4I2 956 aa24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 NUP153P49790 1475 aaKnown RBP24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 MICALCLQ6ZW33 695 aa24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 PLEKHM2Q8IWE5 1019 aa24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 LARP6Q9BRS8 491 aaKnown RBP24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 CCDC94Q9BW85 323 aaPredicted RBP24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 PODXL2Q9NZ53 605 aa24.48■■□□□ 1.51
TGFBR1-202ENST00000374994 PI4KAP2A4QPH2 592 aa24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 PI4KAP1Q8N8J0 262 aa24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 NUP88Q99567 741 aaPredicted RBP24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 USP26Q9BXU7 913 aa24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 MAP3K2Q9Y2U5 619 aa24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 TTF1Q15361 905 aaPredicted RBP24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 IFIT5Q13325 482 aaKnown RBP24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 ANKRD18AQ8IVF6 992 aa24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 EHBP1Q8NDI1 1231 aa24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 POLR3GO15318 223 aaPredicted RBP24.47■■□□□ 1.51
TGFBR1-202ENST00000374994 ZFYVE9O95405 1425 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 HSP90AB3PQ58FF7 597 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 TSHZ3Q63HK5 1081 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 MRPS27Q92552 414 aaKnown RBP24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 CEP85Q6P2H3 762 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 NCOA7Q8NI08 942 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 SMARCC1Q92922 1105 aaPredicted RBP24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 TSG101Q99816 390 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 PRDM11Q9NQV5 511 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 DACT1Q9NYF0 836 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 A0A087WZG4 1122 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 C8orf58Q8NAV2 365 aa24.46■■□□□ 1.51
TGFBR1-202ENST00000374994 KIF20AO95235 890 aa24.45■■□□□ 1.51
TGFBR1-202ENST00000374994 STRN4Q9NRL3 753 aa24.45■■□□□ 1.51
TGFBR1-202ENST00000374994 GNG11P61952 73 aa24.45■■□□□ 1.5
TGFBR1-202ENST00000374994 IQCA1Q86XH1 822 aa24.45■■□□□ 1.5
TGFBR1-202ENST00000374994 RBM8AQ9Y5S9 174 aaKnown RBP24.45■■□□□ 1.5
TGFBR1-202ENST00000374994 FANCAO15360 1455 aa24.45■■□□□ 1.5
TGFBR1-202ENST00000374994 SOS1Q07889 1333 aaPredicted RBP24.45■■□□□ 1.5
TGFBR1-202ENST00000374994 GTF2F1P35269 517 aaKnown RBP eCLIP24.45■■□□□ 1.56e-9■■■□□ 15
TGFBR1-202ENST00000374994 TUBB4BP68371 445 aa24.44■■□□□ 1.5
TGFBR1-202ENST00000374994 BIN1O00499 593 aa24.44■■□□□ 1.5
TGFBR1-202ENST00000374994 SLU7O95391 586 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms