RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SDSP20132 328 aa22.2■■□□□ 1.15
HLA-DQB1-201ENST00000374943 POTEAQ6S8J7 498 aa22.2■■□□□ 1.15
HLA-DQB1-201ENST00000374943 SURF6O75683 361 aaKnown RBP22.2■■□□□ 1.14
HLA-DQB1-201ENST00000374943 MX1P20591 662 aa22.2■■□□□ 1.14
HLA-DQB1-201ENST00000374943 KIF1BPQ96EK5 621 aa22.2■■□□□ 1.14
HLA-DQB1-201ENST00000374943 TJP1Q07157 1748 aa22.2■■□□□ 1.14
HLA-DQB1-201ENST00000374943 GCKRQ14397 625 aa22.19■■□□□ 1.14
HLA-DQB1-201ENST00000374943 PLBD2Q8NHP8 589 aa22.19■■□□□ 1.14
HLA-DQB1-201ENST00000374943 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 NBPF26B4DH59 902 aa22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 SLC4A3P48751 1232 aa22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 NBPF14Q5TI25 921 aa22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 NBPF10Q6P3W6 841 aaKnown RBP22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 NBPF15Q8N660 670 aa22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 RHPN1Q8TCX5 695 aa22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 SUCLG2Q96I99 432 aa22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 MYD88Q99836 296 aa22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 CDCA7Q9BWT1 371 aaPredicted RBP22.18■■□□□ 1.14
HLA-DQB1-201ENST00000374943 KAZALD1Q96I82 304 aa22.17■■□□□ 1.14
HLA-DQB1-201ENST00000374943 VSIG10Q8N0Z9 540 aa22.17■■□□□ 1.14
HLA-DQB1-201ENST00000374943 THRAP3Q9Y2W1 955 aaKnown RBP22.17■■□□□ 1.14
HLA-DQB1-201ENST00000374943 BCL9O00512 1426 aa22.16■■□□□ 1.14
HLA-DQB1-201ENST00000374943 CASC1Q6TDU7 716 aa22.16■■□□□ 1.14
HLA-DQB1-201ENST00000374943 SLIT2O94813 1529 aa22.15■■□□□ 1.14
HLA-DQB1-201ENST00000374943 PIP4K2AP48426 406 aaPredicted RBP22.15■■□□□ 1.14
HLA-DQB1-201ENST00000374943 PIGBQ92521 554 aa22.15■■□□□ 1.14
HLA-DQB1-201ENST00000374943 KAT6BQ8WYB5 2073 aa22.15■■□□□ 1.14
HLA-DQB1-201ENST00000374943 ERC1Q8IUD2 1116 aa22.14■■□□□ 1.14
HLA-DQB1-201ENST00000374943 TEX13AQ9BXU3 409 aaPredicted RBP22.14■■□□□ 1.14
HLA-DQB1-201ENST00000374943 BCL11AQ9H165 835 aa22.14■■□□□ 1.14
HLA-DQB1-201ENST00000374943 BICC1Q9H694 974 aaKnown RBP22.14■■□□□ 1.14
HLA-DQB1-201ENST00000374943 SPATA31A1Q5TZJ5 1347 aa22.14■■□□□ 1.14
HLA-DQB1-201ENST00000374943 EXOC5O00471 708 aa22.14■■□□□ 1.13
HLA-DQB1-201ENST00000374943 PTCD1O75127 700 aaKnown RBP22.14■■□□□ 1.13
HLA-DQB1-201ENST00000374943 TBC1D2Q9BYX2 928 aa22.13■■□□□ 1.13
HLA-DQB1-201ENST00000374943 USP42Q9H9J4 1324 aaKnown RBP22.13■■□□□ 1.13
HLA-DQB1-201ENST00000374943 IL1RAPL2Q9NP60 686 aa22.12■■□□□ 1.13
HLA-DQB1-201ENST00000374943 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
HLA-DQB1-201ENST00000374943 CICQ96RK0 1608 aaPredicted RBP22.11■■□□□ 1.13
HLA-DQB1-201ENST00000374943 JCADQ9P266 1359 aa22.11■■□□□ 1.13
HLA-DQB1-201ENST00000374943 ADAMTS2O95450 1211 aa22.11■■□□□ 1.13
HLA-DQB1-201ENST00000374943 A1BGP04217 495 aa22.11■■□□□ 1.13
HLA-DQB1-201ENST00000374943 ANKRD36CQ5JPF3 1778 aa22.1■■□□□ 1.13
HLA-DQB1-201ENST00000374943 ASAP1Q9ULH1 1129 aa22.1■■□□□ 1.13
HLA-DQB1-201ENST00000374943 RABL6Q3YEC7 729 aaPredicted RBP22.09■■□□□ 1.13
HLA-DQB1-201ENST00000374943 SNX21Q969T3 373 aa22.09■■□□□ 1.13
HLA-DQB1-201ENST00000374943 KIF2CQ99661 725 aa22.09■■□□□ 1.13
HLA-DQB1-201ENST00000374943 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
HLA-DQB1-201ENST00000374943 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
HLA-DQB1-201ENST00000374943 CASP7P55210 303 aa22.08■■□□□ 1.13
HLA-DQB1-201ENST00000374943 OS9Q13438 667 aaPredicted RBP22.08■■□□□ 1.13
HLA-DQB1-201ENST00000374943 TSHZ3Q63HK5 1081 aa22.08■■□□□ 1.13
HLA-DQB1-201ENST00000374943 TTLL7Q6ZT98 887 aa22.08■■□□□ 1.13
HLA-DQB1-201ENST00000374943 TTC41PQ6P2S7 1318 aa22.08■■□□□ 1.12
HLA-DQB1-201ENST00000374943 NUTM1Q86Y26 1132 aa22.07■■□□□ 1.12
HLA-DQB1-201ENST00000374943 PI4K2BQ8TCG2 481 aa22.07■■□□□ 1.12
HLA-DQB1-201ENST00000374943 REC8O95072 547 aa22.07■■□□□ 1.12
HLA-DQB1-201ENST00000374943 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
HLA-DQB1-201ENST00000374943 USP26Q9BXU7 913 aa22.07■■□□□ 1.12
HLA-DQB1-201ENST00000374943 ERC2O15083 957 aa22.06■■□□□ 1.12
HLA-DQB1-201ENST00000374943 EPHA10Q5JZY3 1008 aa22.06■■□□□ 1.12
HLA-DQB1-201ENST00000374943 BARGINQ6ZT62 677 aa22.06■■□□□ 1.12
HLA-DQB1-201ENST00000374943 PA2G4Q9UQ80 394 aaKnown RBP22.06■■□□□ 1.12
HLA-DQB1-201ENST00000374943 A0A087WZG4 1122 aa22.05■■□□□ 1.12
HLA-DQB1-201ENST00000374943 ATP5J2-PTCD1G3V325 749 aa22.05■■□□□ 1.12
HLA-DQB1-201ENST00000374943 H7C1W4 665 aa22.05■■□□□ 1.12
HLA-DQB1-201ENST00000374943 STARD3NLO95772 234 aa22.05■■□□□ 1.12
HLA-DQB1-201ENST00000374943 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
HLA-DQB1-201ENST00000374943 DNAJC10Q8IXB1 793 aa22.05■■□□□ 1.12
HLA-DQB1-201ENST00000374943 RREB1Q92766 1687 aa22.05■■□□□ 1.12
HLA-DQB1-201ENST00000374943 G3BP1Q13283 466 aaKnown RBP eCLIP22.04■■□□□ 1.12
HLA-DQB1-201ENST00000374943 CCDC191Q8NCU4 936 aa22.04■■□□□ 1.12
HLA-DQB1-201ENST00000374943 COPRSQ9NQ92 184 aa22.04■■□□□ 1.12
HLA-DQB1-201ENST00000374943 CWC25Q9NXE8 425 aaPredicted RBP22.04■■□□□ 1.12
HLA-DQB1-201ENST00000374943 DDB1Q16531 1140 aa22.04■■□□□ 1.12
HLA-DQB1-201ENST00000374943 NUP98P52948 1817 aa22.03■■□□□ 1.12
HLA-DQB1-201ENST00000374943 NUTM2BA6NNL0 878 aaPredicted RBP22.03■■□□□ 1.12
HLA-DQB1-201ENST00000374943 NUTM2EB1AL46 878 aaPredicted RBP22.03■■□□□ 1.12
HLA-DQB1-201ENST00000374943 NUTM2AQ8IVF1 878 aaPredicted RBP22.03■■□□□ 1.12
HLA-DQB1-201ENST00000374943 HSCBQ8IWL3 235 aa22.03■■□□□ 1.12
HLA-DQB1-201ENST00000374943 TRIM6-TRIM34B2RNG4 842 aa22.02■■□□□ 1.12
HLA-DQB1-201ENST00000374943 SASH1O94885 1247 aa22.02■■□□□ 1.12
HLA-DQB1-201ENST00000374943 CHMLP26374 656 aa22.02■■□□□ 1.12
HLA-DQB1-201ENST00000374943 RFX5P48382 616 aaPredicted RBP22.02■■□□□ 1.12
HLA-DQB1-201ENST00000374943 ESYT1Q9BSJ8 1104 aa22.02■■□□□ 1.12
HLA-DQB1-201ENST00000374943 GLRX3O76003 335 aaKnown RBP22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 GPATCH3Q96I76 525 aa22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 RBM42Q9BTD8 480 aaKnown RBP22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 ISCA1Q9BUE6 129 aa22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 ZNF831Q5JPB2 1677 aa22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 TRIM28Q13263 835 aaKnown RBP22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 UNC5CLQ8IV45 518 aa22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 RILPL2Q969X0 211 aa22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 ZBTB3Q9H5J0 574 aa22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 ANTXR1Q9H6X2 564 aa22.01■■□□□ 1.11
HLA-DQB1-201ENST00000374943 CYP19A1P11511 503 aaPredicted RBP22■■□□□ 1.11
HLA-DQB1-201ENST00000374943 SLC4A9Q96Q91 983 aa22■■□□□ 1.11
HLA-DQB1-201ENST00000374943 ECHDC1Q9NTX5 307 aa22■■□□□ 1.11
HLA-DQB1-201ENST00000374943 MYH3P11055 1940 aa22■■□□□ 1.11
HLA-DQB1-201ENST00000374943 EPB41L2O43491 1005 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms