RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SPATA31C1P0DKV0 1188 aa9.23□□□□□ -0.93
PMS1-202ENST00000374826 TNS4Q8IZW8 715 aa9.23□□□□□ -0.93
PMS1-202ENST00000374826 SIN3BO75182 1162 aa9.22□□□□□ -0.93
PMS1-202ENST00000374826 GATA4P43694 442 aa9.22□□□□□ -0.93
PMS1-202ENST00000374826 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
PMS1-202ENST00000374826 ZNF232Q9UNY5 417 aa9.22□□□□□ -0.93
PMS1-202ENST00000374826 GPC6Q9Y625 555 aaPredicted RBP9.22□□□□□ -0.93
PMS1-202ENST00000374826 ADARB2-AS1A8MUL3 147 aa9.21□□□□□ -0.94
PMS1-202ENST00000374826 ITGB7P26010 798 aa9.21□□□□□ -0.94
PMS1-202ENST00000374826 SFSWAPQ12872 951 aaKnown RBP9.21□□□□□ -0.94
PMS1-202ENST00000374826 TBCELQ5QJ74 424 aa9.21□□□□□ -0.94
PMS1-202ENST00000374826 DEPDC4Q8N2C3 294 aa9.21□□□□□ -0.94
PMS1-202ENST00000374826 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.94
PMS1-202ENST00000374826 SERTM1A2A2V5 107 aa9.2□□□□□ -0.94
PMS1-202ENST00000374826 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
PMS1-202ENST00000374826 WWC1Q8IX03 1113 aa9.2□□□□□ -0.94
PMS1-202ENST00000374826 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
PMS1-202ENST00000374826 USP17L5A8MUK1 530 aa9.19□□□□□ -0.94
PMS1-202ENST00000374826 SLC30A3Q99726 388 aa9.19□□□□□ -0.94
PMS1-202ENST00000374826 SH3PXD2AQ5TCZ1 1133 aa9.18□□□□□ -0.94
PMS1-202ENST00000374826 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
PMS1-202ENST00000374826 COL9A3Q14050 684 aaPredicted RBP9.17□□□□□ -0.94
PMS1-202ENST00000374826 PRRT3Q5FWE3 981 aa9.17□□□□□ -0.94
PMS1-202ENST00000374826 C1orf53Q5VUE5 145 aa9.17□□□□□ -0.94
PMS1-202ENST00000374826 TNFRSF25Q93038 417 aa9.17□□□□□ -0.94
PMS1-202ENST00000374826 POM121Q96HA1 1249 aa9.17□□□□□ -0.94
PMS1-202ENST00000374826 PRDM6Q9NQX0 595 aa9.17□□□□□ -0.94
PMS1-202ENST00000374826 STARD13Q9Y3M8 1113 aa9.17□□□□□ -0.94
PMS1-202ENST00000374826 M0R082 166 aa9.16□□□□□ -0.94
PMS1-202ENST00000374826 FLIIQ13045 1269 aa9.16□□□□□ -0.94
PMS1-202ENST00000374826 CCDC102BQ68D86 513 aa9.16□□□□□ -0.94
PMS1-202ENST00000374826 TPCN2Q8NHX9 752 aa9.16□□□□□ -0.94
PMS1-202ENST00000374826 ZNF417Q8TAU3 575 aa9.16□□□□□ -0.94
PMS1-202ENST00000374826 RHPN1Q8TCX5 695 aa9.16□□□□□ -0.94
PMS1-202ENST00000374826 ZNF587Q96SQ5 575 aaPredicted RBP9.16□□□□□ -0.94
PMS1-202ENST00000374826 HCN4Q9Y3Q4 1203 aa9.16□□□□□ -0.94
PMS1-202ENST00000374826 SPEM2Q0P670 501 aa9.15□□□□□ -0.94
PMS1-202ENST00000374826 MICALL1Q8N3F8 863 aa9.15□□□□□ -0.94
PMS1-202ENST00000374826 ANKIB1Q9P2G1 1089 aa9.15□□□□□ -0.94
PMS1-202ENST00000374826 KIAA1024Q9UPX6 916 aa9.15□□□□□ -0.94
PMS1-202ENST00000374826 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
PMS1-202ENST00000374826 PSMA6P60900 246 aaKnown RBP9.14□□□□□ -0.95
PMS1-202ENST00000374826 CLDN10P78369 228 aa9.14□□□□□ -0.95
PMS1-202ENST00000374826 POTEAQ6S8J7 498 aa9.14□□□□□ -0.95
PMS1-202ENST00000374826 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
PMS1-202ENST00000374826 PLEKHM2Q8IWE5 1019 aa9.14□□□□□ -0.95
PMS1-202ENST00000374826 TSPAN10Q9H1Z9 355 aaPredicted RBP9.14□□□□□ -0.95
PMS1-202ENST00000374826 SFI1A8K8P3 1242 aa9.13□□□□□ -0.95
PMS1-202ENST00000374826 APBA3O96018 575 aa9.13□□□□□ -0.95
PMS1-202ENST00000374826 HIRAP54198 1017 aaPredicted RBP9.13□□□□□ -0.95
PMS1-202ENST00000374826 KCNQ4P56696 695 aa9.13□□□□□ -0.95
PMS1-202ENST00000374826 TRIM28Q13263 835 aaKnown RBP9.13□□□□□ -0.95
PMS1-202ENST00000374826 NEUROD1Q13562 356 aa9.13□□□□□ -0.95
PMS1-202ENST00000374826 RSPO4Q2I0M5 234 aaPredicted RBP9.13□□□□□ -0.95
PMS1-202ENST00000374826 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
PMS1-202ENST00000374826 CEP63Q96MT8 703 aa9.13□□□□□ -0.95
PMS1-202ENST00000374826 M0R2N6 131 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 RAD21O60216 631 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 ALBP02768 609 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
PMS1-202ENST00000374826 NKAPLQ5M9Q1 402 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 LARGE2Q8N3Y3 721 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 PHACTR1Q9C0D0 580 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 BRD7Q9NPI1 651 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 KCNH4Q9UQ05 1017 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 CHMP3Q9Y3E7 222 aa9.12□□□□□ -0.95
PMS1-202ENST00000374826 USP17L3A6NCW0 530 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 USP17L4A6NCW7 530 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 POM121CA8CG34 1229 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 FAM229AH3BQW9 127 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 ADH7P40394 386 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 ZMYM1Q5SVZ6 1142 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 HDGFL1Q5TGJ6 251 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 USP17L2Q6R6M4 530 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 C20orf204Q6ZNR8 217 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 USP17L1Q7RTZ2 530 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
PMS1-202ENST00000374826 ZNF280CQ8ND82 737 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 HSH2DQ96JZ2 352 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 SUSD3Q96L08 255 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 TPSG1Q9NRR2 321 aa9.11□□□□□ -0.95
PMS1-202ENST00000374826 PALM3A6NDB9 673 aaPredicted RBP9.1□□□□□ -0.95
PMS1-202ENST00000374826 NID1P14543 1247 aa9.1□□□□□ -0.95
PMS1-202ENST00000374826 OGFOD1Q8N543 542 aa9.1□□□□□ -0.95
PMS1-202ENST00000374826 MKRN1Q9UHC7 482 aaKnown RBP9.1□□□□□ -0.95
PMS1-202ENST00000374826 ATP9BO43861 1147 aa9.09□□□□□ -0.95
PMS1-202ENST00000374826 NACC1Q96RE7 527 aa9.09□□□□□ -0.95
PMS1-202ENST00000374826 UCN2Q96RP3 112 aa9.09□□□□□ -0.95
PMS1-202ENST00000374826 KRTAP4-8Q9BYQ9 185 aa9.09□□□□□ -0.95
PMS1-202ENST00000374826 TYRO3Q06418 890 aa9.08□□□□□ -0.96
PMS1-202ENST00000374826 GRIK4Q16099 956 aa9.08□□□□□ -0.96
PMS1-202ENST00000374826 C21orf2O43822 256 aa9.07□□□□□ -0.96
PMS1-202ENST00000374826 DKK1O94907 266 aa9.07□□□□□ -0.96
PMS1-202ENST00000374826 TRAPPC3LQ5T215 181 aa9.07□□□□□ -0.96
PMS1-202ENST00000374826 SIX5Q8N196 739 aa9.07□□□□□ -0.96
PMS1-202ENST00000374826 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
PMS1-202ENST00000374826 PPP1R12BO60237 982 aaPredicted RBP9.06□□□□□ -0.96
PMS1-202ENST00000374826 LILRB5O75023 590 aa9.06□□□□□ -0.96
PMS1-202ENST00000374826 ALDH16A1Q8IZ83 802 aa9.06□□□□□ -0.96
PMS1-202ENST00000374826 BHMTQ93088 406 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms