RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
HLA-DOA-202ENST00000374813 STARD3NLO95772 234 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 ST5P78524 1137 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 PRPF38BQ5VTL8 546 aaKnown RBP12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 TSKSQ9UJT2 592 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 ANKRD31Q8N7Z5 1873 aa12.91□□□□□ -0.34
HLA-DOA-202ENST00000374813 RNF123Q5XPI4 1314 aa12.9□□□□□ -0.34
HLA-DOA-202ENST00000374813 FZD9O00144 591 aa12.9□□□□□ -0.34
HLA-DOA-202ENST00000374813 EIF5P55010 431 aaKnown RBP12.9□□□□□ -0.34
HLA-DOA-202ENST00000374813 FKBP4Q02790 459 aaKnown RBP eCLIP12.9□□□□□ -0.34
HLA-DOA-202ENST00000374813 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
HLA-DOA-202ENST00000374813 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
HLA-DOA-202ENST00000374813 C7orf43Q8WVR3 580 aa12.9□□□□□ -0.34
HLA-DOA-202ENST00000374813 ZNF541Q9H0D2 1346 aa12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 THSD7BQ9C0I4 1608 aa12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 BRPF1P55201 1214 aaPredicted RBP12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 JDP2Q8WYK2 163 aa12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 TLL2Q9Y6L7 1015 aa12.89□□□□□ -0.35
HLA-DOA-202ENST00000374813 CST9Q5W186 159 aa12.88□□□□□ -0.35
HLA-DOA-202ENST00000374813 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
HLA-DOA-202ENST00000374813 HHIPL1Q96JK4 782 aa12.88□□□□□ -0.35
HLA-DOA-202ENST00000374813 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
HLA-DOA-202ENST00000374813 TRPM7Q96QT4 1865 aa12.88□□□□□ -0.35
HLA-DOA-202ENST00000374813 AOC2O75106 756 aa12.87□□□□□ -0.35
HLA-DOA-202ENST00000374813 NPR1P16066 1061 aa12.87□□□□□ -0.35
HLA-DOA-202ENST00000374813 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
HLA-DOA-202ENST00000374813 SLC39A6Q13433 755 aa12.87□□□□□ -0.35
HLA-DOA-202ENST00000374813 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
HLA-DOA-202ENST00000374813 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
HLA-DOA-202ENST00000374813 COL11A2P13942 1736 aaPredicted RBP12.86□□□□□ -0.35
HLA-DOA-202ENST00000374813 IARSP41252 1262 aaKnown RBP12.86□□□□□ -0.35
HLA-DOA-202ENST00000374813 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
HLA-DOA-202ENST00000374813 SAPCD2Q86UD0 394 aa12.86□□□□□ -0.35
HLA-DOA-202ENST00000374813 TEX13AQ9BXU3 409 aaPredicted RBP12.86□□□□□ -0.35
HLA-DOA-202ENST00000374813 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
HLA-DOA-202ENST00000374813 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
HLA-DOA-202ENST00000374813 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
HLA-DOA-202ENST00000374813 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
HLA-DOA-202ENST00000374813 LGR6Q9HBX8 967 aa12.85□□□□□ -0.35
HLA-DOA-202ENST00000374813 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
HLA-DOA-202ENST00000374813 IL6STP40189 918 aaPredicted RBP12.84□□□□□ -0.35
HLA-DOA-202ENST00000374813 AEBP1Q8IUX7 1158 aa12.84□□□□□ -0.35
HLA-DOA-202ENST00000374813 TTC5Q8N0Z6 440 aa12.84□□□□□ -0.35
HLA-DOA-202ENST00000374813 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
HLA-DOA-202ENST00000374813 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
HLA-DOA-202ENST00000374813 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
HLA-DOA-202ENST00000374813 RNMTO43148 476 aaKnown RBP12.83□□□□□ -0.36
HLA-DOA-202ENST00000374813 FMR1Q06787 632 aaKnown RBP eCLIP12.83□□□□□ -0.36
HLA-DOA-202ENST00000374813 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
HLA-DOA-202ENST00000374813 LTBP1Q14766 1721 aa12.82□□□□□ -0.36
HLA-DOA-202ENST00000374813 TRAF5O00463 557 aa12.82□□□□□ -0.36
HLA-DOA-202ENST00000374813 SOX10P56693 466 aa12.82□□□□□ -0.36
HLA-DOA-202ENST00000374813 NOGQ13253 232 aa12.82□□□□□ -0.36
HLA-DOA-202ENST00000374813 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
HLA-DOA-202ENST00000374813 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
HLA-DOA-202ENST00000374813 PSMD1Q99460 953 aa12.82□□□□□ -0.36
HLA-DOA-202ENST00000374813 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
HLA-DOA-202ENST00000374813 EPS15P42566 896 aa12.81□□□□□ -0.36
HLA-DOA-202ENST00000374813 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
HLA-DOA-202ENST00000374813 CC2D2BQ6DHV5 1058 aa12.81□□□□□ -0.36
HLA-DOA-202ENST00000374813 CLEC4GQ6UXB4 293 aa12.81□□□□□ -0.36
HLA-DOA-202ENST00000374813 TPTE2Q6XPS3 522 aa12.81□□□□□ -0.36
HLA-DOA-202ENST00000374813 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
HLA-DOA-202ENST00000374813 SCNN1DP51172 638 aa12.8□□□□□ -0.36
HLA-DOA-202ENST00000374813 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
HLA-DOA-202ENST00000374813 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
HLA-DOA-202ENST00000374813 SAGE1Q9NXZ1 904 aa12.79□□□□□ -0.36
HLA-DOA-202ENST00000374813 ZNF652Q9Y2D9 606 aa12.79□□□□□ -0.36
HLA-DOA-202ENST00000374813 MRC1P22897 1456 aa12.78□□□□□ -0.36
HLA-DOA-202ENST00000374813 SCN7AQ01118 1682 aa12.78□□□□□ -0.36
HLA-DOA-202ENST00000374813 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
HLA-DOA-202ENST00000374813 DZIP3Q86Y13 1208 aaKnown RBP12.77□□□□□ -0.37
HLA-DOA-202ENST00000374813 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
HLA-DOA-202ENST00000374813 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
HLA-DOA-202ENST00000374813 IL13P35225 146 aa12.76□□□□□ -0.37
HLA-DOA-202ENST00000374813 ZNF790Q6PG37 636 aa12.76□□□□□ -0.37
HLA-DOA-202ENST00000374813 CDC37L1Q7L3B6 337 aa12.76□□□□□ -0.37
HLA-DOA-202ENST00000374813 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
HLA-DOA-202ENST00000374813 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
HLA-DOA-202ENST00000374813 HEG1Q9ULI3 1381 aa12.76□□□□□ -0.37
HLA-DOA-202ENST00000374813 RGL2O15211 777 aa12.75□□□□□ -0.37
HLA-DOA-202ENST00000374813 A1BGP04217 495 aa12.75□□□□□ -0.37
HLA-DOA-202ENST00000374813 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
HLA-DOA-202ENST00000374813 UBR2Q8IWV8 1755 aa12.75□□□□□ -0.37
HLA-DOA-202ENST00000374813 GPRC5DQ9NZD1 345 aa12.75□□□□□ -0.37
HLA-DOA-202ENST00000374813 MKI67P46013 3256 aaKnown RBP12.75□□□□□ -0.37
HLA-DOA-202ENST00000374813 HUNKP57058 714 aa12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 TEFQ10587 303 aa12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 PKN2Q16513 984 aaKnown RBP12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 CTU1Q7Z7A3 348 aaKnown RBP12.74□□□□□ -0.37
HLA-DOA-202ENST00000374813 NIM1KQ8IY84 436 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms