RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 DDB1Q16531 1140 aa20.9■□□□□ 0.94
PTPN20-203ENST00000374342 HDAC5Q9UQL6 1122 aa20.9■□□□□ 0.94
PTPN20-203ENST00000374342 SYTL4Q96C24 671 aaPredicted RBP20.9■□□□□ 0.94
PTPN20-203ENST00000374342 ATG3Q9NT62 314 aa20.9■□□□□ 0.94
PTPN20-203ENST00000374342 SURF6O75683 361 aaKnown RBP20.89■□□□□ 0.93
PTPN20-203ENST00000374342 PLBD2Q8NHP8 589 aa20.89■□□□□ 0.93
PTPN20-203ENST00000374342 SUCLG2Q96I99 432 aa20.89■□□□□ 0.93
PTPN20-203ENST00000374342 TBC1D32Q96NH3 1257 aa20.89■□□□□ 0.93
PTPN20-203ENST00000374342 GCKRQ14397 625 aa20.88■□□□□ 0.93
PTPN20-203ENST00000374342 MTX1Q13505 466 aa20.88■□□□□ 0.93
PTPN20-203ENST00000374342 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
PTPN20-203ENST00000374342 TTLL7Q6ZT98 887 aa20.87■□□□□ 0.93
PTPN20-203ENST00000374342 C8orf37Q96NL8 207 aa20.87■□□□□ 0.93
PTPN20-203ENST00000374342 CDC45O75419 566 aa20.86■□□□□ 0.93
PTPN20-203ENST00000374342 DNAJC10Q8IXB1 793 aa20.86■□□□□ 0.93
PTPN20-203ENST00000374342 RAB11FIP3O75154 756 aa20.86■□□□□ 0.93
PTPN20-203ENST00000374342 TBC1D9Q6ZT07 1266 aa20.86■□□□□ 0.93
PTPN20-203ENST00000374342 VSIG10Q8N0Z9 540 aa20.86■□□□□ 0.93
PTPN20-203ENST00000374342 BICC1Q9H694 974 aaKnown RBP20.86■□□□□ 0.93
PTPN20-203ENST00000374342 AK9Q5TCS8 1911 aa20.85■□□□□ 0.93
PTPN20-203ENST00000374342 ATP5J2-PTCD1G3V325 749 aa20.85■□□□□ 0.93
PTPN20-203ENST00000374342 PDE1AP54750 535 aa20.85■□□□□ 0.93
PTPN20-203ENST00000374342 IL1RAPL2Q9NP60 686 aa20.85■□□□□ 0.93
PTPN20-203ENST00000374342 SALL3Q9BXA9 1300 aa20.85■□□□□ 0.93
PTPN20-203ENST00000374342 A0A0G2JS52 829 aa20.84■□□□□ 0.93
PTPN20-203ENST00000374342 BARGINQ6ZT62 677 aa20.84■□□□□ 0.93
PTPN20-203ENST00000374342 UNC5CLQ8IV45 518 aa20.84■□□□□ 0.93
PTPN20-203ENST00000374342 KAZALD1Q96I82 304 aa20.84■□□□□ 0.93
PTPN20-203ENST00000374342 MX1P20591 662 aa20.84■□□□□ 0.93
PTPN20-203ENST00000374342 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
PTPN20-203ENST00000374342 OS9Q13438 667 aaPredicted RBP20.84■□□□□ 0.93
PTPN20-203ENST00000374342 NGLY1Q96IV0 654 aa20.84■□□□□ 0.93
PTPN20-203ENST00000374342 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
PTPN20-203ENST00000374342 ZNF330Q9Y3S2 320 aaPredicted RBP20.84■□□□□ 0.93
PTPN20-203ENST00000374342 BCL9LQ86UU0 1499 aa20.83■□□□□ 0.93
PTPN20-203ENST00000374342 TSHZ3Q63HK5 1081 aa20.83■□□□□ 0.93
PTPN20-203ENST00000374342 RHPN1Q8TCX5 695 aa20.83■□□□□ 0.93
PTPN20-203ENST00000374342 C22orf23Q9BZE7 217 aa20.83■□□□□ 0.93
PTPN20-203ENST00000374342 OSBPL3Q9H4L5 887 aa20.83■□□□□ 0.93
PTPN20-203ENST00000374342 ZBTB3Q9H5J0 574 aa20.83■□□□□ 0.93
PTPN20-203ENST00000374342 HSP90AB4PQ58FF6 505 aa20.82■□□□□ 0.92
PTPN20-203ENST00000374342 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
PTPN20-203ENST00000374342 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
PTPN20-203ENST00000374342 ANKRD36CQ5JPF3 1778 aa20.82■□□□□ 0.92
PTPN20-203ENST00000374342 SDSP20132 328 aa20.82■□□□□ 0.92
PTPN20-203ENST00000374342 UBE3BQ7Z3V4 1068 aa20.82■□□□□ 0.92
PTPN20-203ENST00000374342 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
PTPN20-203ENST00000374342 STARD3NLO95772 234 aa20.81■□□□□ 0.92
PTPN20-203ENST00000374342 CERKQ8TCT0 537 aa20.81■□□□□ 0.92
PTPN20-203ENST00000374342 JARID2Q92833 1246 aaPredicted RBP20.81■□□□□ 0.92
PTPN20-203ENST00000374342 DAXXQ9UER7 740 aaPredicted RBP20.81■□□□□ 0.92
PTPN20-203ENST00000374342 PA2G4Q9UQ80 394 aaKnown RBP20.81■□□□□ 0.92
PTPN20-203ENST00000374342 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
PTPN20-203ENST00000374342 A0A087WZG4 1122 aa20.8■□□□□ 0.92
PTPN20-203ENST00000374342 FAM98CQ17RN3 349 aaKnown RBP20.8■□□□□ 0.92
PTPN20-203ENST00000374342 SLC4A9Q96Q91 983 aa20.8■□□□□ 0.92
PTPN20-203ENST00000374342 SPATA31A6Q5VVP1 1343 aa20.8■□□□□ 0.92
PTPN20-203ENST00000374342 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
PTPN20-203ENST00000374342 EPHA10Q5JZY3 1008 aa20.79■□□□□ 0.92
PTPN20-203ENST00000374342 NUTM1Q86Y26 1132 aa20.79■□□□□ 0.92
PTPN20-203ENST00000374342 VPS72Q15906 364 aa20.78■□□□□ 0.92
PTPN20-203ENST00000374342 CICQ96RK0 1608 aaPredicted RBP20.78■□□□□ 0.92
PTPN20-203ENST00000374342 KIF6Q6ZMV9 814 aa20.78■□□□□ 0.92
PTPN20-203ENST00000374342 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
PTPN20-203ENST00000374342 COL15A1P39059 1388 aa20.78■□□□□ 0.92
PTPN20-203ENST00000374342 AOX1Q06278 1338 aa20.77■□□□□ 0.92
PTPN20-203ENST00000374342 STAP2Q9UGK3 403 aa20.77■□□□□ 0.92
PTPN20-203ENST00000374342 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.91
PTPN20-203ENST00000374342 ERC1Q8IUD2 1116 aa20.76■□□□□ 0.91
PTPN20-203ENST00000374342 CYP19A1P11511 503 aaPredicted RBP20.76■□□□□ 0.91
PTPN20-203ENST00000374342 CASP7P55210 303 aa20.76■□□□□ 0.91
PTPN20-203ENST00000374342 CASC1Q6TDU7 716 aa20.76■□□□□ 0.91
PTPN20-203ENST00000374342 NUP98P52948 1817 aa20.75■□□□□ 0.91
PTPN20-203ENST00000374342 RREB1Q92766 1687 aa20.75■□□□□ 0.91
PTPN20-203ENST00000374342 MYT1Q01538 1121 aa20.74■□□□□ 0.91
PTPN20-203ENST00000374342 FNBP4Q8N3X1 1017 aaPredicted RBP20.74■□□□□ 0.91
PTPN20-203ENST00000374342 ARXQ96QS3 562 aa20.74■□□□□ 0.91
PTPN20-203ENST00000374342 SIL1Q9H173 461 aa20.74■□□□□ 0.91
PTPN20-203ENST00000374342 ZBTB1Q9Y2K1 713 aa20.74■□□□□ 0.91
PTPN20-203ENST00000374342 COL5A3P25940 1745 aaPredicted RBP20.73■□□□□ 0.91
PTPN20-203ENST00000374342 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.91
PTPN20-203ENST00000374342 BECN1Q14457 450 aa20.73■□□□□ 0.91
PTPN20-203ENST00000374342 RTL5Q5HYW3 569 aaPredicted RBP20.73■□□□□ 0.91
PTPN20-203ENST00000374342 CCDC191Q8NCU4 936 aa20.73■□□□□ 0.91
PTPN20-203ENST00000374342 KLHDC4Q8TBB5 520 aa20.73■□□□□ 0.91
PTPN20-203ENST00000374342 USP21Q9UK80 565 aa20.73■□□□□ 0.91
PTPN20-203ENST00000374342 TRIM6-TRIM34B2RNG4 842 aa20.72■□□□□ 0.91
PTPN20-203ENST00000374342 H7C1W4 665 aa20.72■□□□□ 0.91
PTPN20-203ENST00000374342 RBM25P49756 843 aaKnown RBP20.72■□□□□ 0.91
PTPN20-203ENST00000374342 RABL6Q3YEC7 729 aaPredicted RBP20.72■□□□□ 0.91
PTPN20-203ENST00000374342 CLASRPQ8N2M8 674 aaKnown RBP20.72■□□□□ 0.91
PTPN20-203ENST00000374342 ANP32EQ9BTT0 268 aa20.72■□□□□ 0.91
PTPN20-203ENST00000374342 EIF5BO60841 1220 aaKnown RBP20.72■□□□□ 0.91
PTPN20-203ENST00000374342 MEX3CQ5U5Q3 659 aaKnown RBP20.72■□□□□ 0.91
PTPN20-203ENST00000374342 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
PTPN20-203ENST00000374342 MAP3K15Q6ZN16 1313 aa20.71■□□□□ 0.91
PTPN20-203ENST00000374342 HSPA1LP34931 641 aa20.71■□□□□ 0.91
PTPN20-203ENST00000374342 RILPL2Q969X0 211 aa20.71■□□□□ 0.91
PTPN20-203ENST00000374342 ISCA1Q9BUE6 129 aa20.71■□□□□ 0.91
PTPN20-203ENST00000374342 TCIRG1Q13488 830 aa20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms