RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 IQCGQ9H095 443 aaKnown RBP8.07□□□□□ -1.12
CSMD2-206ENST00000373388 GOPCQ9HD26 462 aa8.07□□□□□ -1.12
CSMD2-206ENST00000373388 UIMC1Q96RL1 719 aa8.07□□□□□ -1.12
CSMD2-206ENST00000373388 PYM1Q9BRP8 204 aaKnown RBP8.07□□□□□ -1.12
CSMD2-206ENST00000373388 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
CSMD2-206ENST00000373388 FAN1Q9Y2M0 1017 aa8.07□□□□□ -1.12
CSMD2-206ENST00000373388 TAF7Q15545 349 aaPredicted RBP8.07□□□□□ -1.12
CSMD2-206ENST00000373388 LRRD1A4D1F6 860 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 TNPO1Q92973 898 aaKnown RBP8.06□□□□□ -1.12
CSMD2-206ENST00000373388 A0A1W2PRG0 241 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 MXRA7P84157 204 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 CCDC57Q2TAC2 916 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 RAB11FIP4Q86YS3 637 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 CTAGE1Q96RT6 745 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 RAD50Q92878 1312 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 MAP3K21Q5TCX8 1036 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 NUP88Q99567 741 aaPredicted RBP8.06□□□□□ -1.12
CSMD2-206ENST00000373388 SH3GL3Q99963 347 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 PHLDB3Q6NSJ2 640 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 ZBTB16Q05516 673 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 ZSCAN26Q16670 478 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 Q9H521 79 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 RPAP2Q8IXW5 612 aaPredicted RBP8.06□□□□□ -1.12
CSMD2-206ENST00000373388 MGEA5O60502 916 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 RNF10Q8N5U6 811 aaKnown RBP8.06□□□□□ -1.12
CSMD2-206ENST00000373388 MED4Q9NPJ6 270 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 AKNAQ7Z591 1439 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 ANAPC15P60006 121 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 ZSCAN23Q3MJ62 389 aa8.06□□□□□ -1.12
CSMD2-206ENST00000373388 BMP2KQ9NSY1 1161 aaPredicted RBP8.06□□□□□ -1.12
CSMD2-206ENST00000373388 BCAP29Q9UHQ4 241 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 PPP2R5AQ15172 486 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 EFCAB13Q8IY85 973 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 RAB3IPQ96QF0 476 aaPredicted RBP8.05□□□□□ -1.12
CSMD2-206ENST00000373388 NUF2Q9BZD4 464 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 CREB3O43889 395 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 GNAI1P63096 354 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 RPGRIP1LQ68CZ1 1315 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 TRIM21P19474 475 aaKnown RBP8.05□□□□□ -1.12
CSMD2-206ENST00000373388 TRPC3Q13507 836 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 ZNF428Q96B54 188 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 HNRNPMP52272 730 aaKnown RBP eCLIP8.05□□□□□ -1.12
CSMD2-206ENST00000373388 CETN3O15182 167 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 ZNF165P49910 485 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 HDAC1Q13547 482 aaPredicted RBP8.05□□□□□ -1.12
CSMD2-206ENST00000373388 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 NBPF5PQ86XG9 351 aaPredicted RBP8.05□□□□□ -1.12
CSMD2-206ENST00000373388 RASEFQ8IZ41 740 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 PPP1R14CQ8TAE6 165 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 SRGAP3O43295 1099 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 JADE2Q9NQC1 790 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 PPP1R12CQ9BZL4 782 aa8.05□□□□□ -1.12
CSMD2-206ENST00000373388 TTC19Q6DKK2 380 aaPredicted RBP8.04□□□□□ -1.12
CSMD2-206ENST00000373388 FHOD3Q2V2M9 1422 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 RUNDC1Q96C34 613 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 DIAPH1O60610 1272 aaKnown RBP8.04□□□□□ -1.12
CSMD2-206ENST00000373388 PRR16Q569H4 304 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 ICE2Q659A1 982 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 KDM4AO75164 1064 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 INTS8Q75QN2 995 aaKnown RBP8.04□□□□□ -1.12
CSMD2-206ENST00000373388 APAF1O14727 1248 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 AMPHP49418 695 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 HOMER2Q9NSB8 354 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 GOLGA6CA6NDK9 693 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 GOLGA6DP0CG33 693 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 EIF2AQ9BY44 585 aaKnown RBP8.04□□□□□ -1.12
CSMD2-206ENST00000373388 GOLGA6AQ9NYA3 693 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 NBPF7P0C2Y1 421 aaPredicted RBP8.04□□□□□ -1.12
CSMD2-206ENST00000373388 MAP7D1Q3KQU3 841 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 CCDC178Q5BJE1 867 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 CCDC62Q6P9F0 684 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 ATP2A1O14983 1001 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 HIP1RO75146 1068 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 MPNDQ8N594 471 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 TANGO6Q9C0B7 1094 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 GNAI3P08754 354 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 FERMT1Q9BQL6 677 aa8.04□□□□□ -1.12
CSMD2-206ENST00000373388 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSMD2-206ENST00000373388 SMARCC2Q8TAQ2 1214 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 CABS1Q96KC9 395 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 TSGA10Q9BZW7 698 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 FAF1Q9UNN5 650 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 IRX1P78414 480 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 COG7P83436 770 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 KRT18P05783 430 aaKnown RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 MCUR1Q96AQ8 359 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 DNAI2Q9GZS0 605 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 RABEP2Q9H5N1 569 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 DDX58O95786 925 aaKnown RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 SNCBQ16143 134 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 ERCC6LQ2NKX8 1250 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 TSNARE1Q96NA8 513 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 ZFXP17010 805 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 POLE3Q9NRF9 147 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 PANK1Q8TE04 598 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 SMIM24O75264 130 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 RUFY3Q7L099 469 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 TMC6Q7Z403 805 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms