RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 COL3A1P02461 1466 aaPredicted RBP25.62■■□□□ 1.69
TRAPPC3-204ENST00000373166 ANKRD31Q8N7Z5 1873 aa25.62■■□□□ 1.69
TRAPPC3-204ENST00000373166 CEMIPQ8WUJ3 1361 aa25.61■■□□□ 1.69
TRAPPC3-204ENST00000373166 IQCA1LA6NCM1 817 aa25.61■■□□□ 1.69
TRAPPC3-204ENST00000373166 MKRN1Q9UHC7 482 aaKnown RBP25.61■■□□□ 1.69
TRAPPC3-204ENST00000373166 CCDC88AQ3V6T2 1871 aa25.61■■□□□ 1.69
TRAPPC3-204ENST00000373166 POTEIP0CG38 1075 aa25.6■■□□□ 1.69
TRAPPC3-204ENST00000373166 POTEJP0CG39 1038 aa25.6■■□□□ 1.69
TRAPPC3-204ENST00000373166 CLEC4GQ6UXB4 293 aa25.6■■□□□ 1.69
TRAPPC3-204ENST00000373166 KCNQ3O43525 872 aa25.59■■□□□ 1.69
TRAPPC3-204ENST00000373166 NBPF5PQ86XG9 351 aaPredicted RBP25.59■■□□□ 1.69
TRAPPC3-204ENST00000373166 FER1L6Q2WGJ9 1857 aa25.58■■□□□ 1.69
TRAPPC3-204ENST00000373166 COL11A2P13942 1736 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC3-204ENST00000373166 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
TRAPPC3-204ENST00000373166 CFAP53Q96M91 514 aa25.58■■□□□ 1.69
TRAPPC3-204ENST00000373166 ZNF652Q9Y2D9 606 aa25.58■■□□□ 1.69
TRAPPC3-204ENST00000373166 USP16Q9Y5T5 823 aa25.58■■□□□ 1.69
TRAPPC3-204ENST00000373166 CCDC93Q567U6 631 aa25.57■■□□□ 1.68
TRAPPC3-204ENST00000373166 LDHDQ86WU2 507 aa25.57■■□□□ 1.68
TRAPPC3-204ENST00000373166 C7orf43Q8WVR3 580 aa25.57■■□□□ 1.68
TRAPPC3-204ENST00000373166 PHACTR3Q96KR7 559 aa25.57■■□□□ 1.68
TRAPPC3-204ENST00000373166 NPR1P16066 1061 aa25.56■■□□□ 1.68
TRAPPC3-204ENST00000373166 L3MBTL3Q96JM7 780 aaPredicted RBP25.56■■□□□ 1.68
TRAPPC3-204ENST00000373166 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
TRAPPC3-204ENST00000373166 PIP4K2AP48426 406 aaPredicted RBP25.55■■□□□ 1.68
TRAPPC3-204ENST00000373166 TAF1DQ9H5J8 278 aaPredicted RBP25.55■■□□□ 1.68
TRAPPC3-204ENST00000373166 SNRPA1P09661 255 aaKnown RBP25.54■■□□□ 1.68
TRAPPC3-204ENST00000373166 PPP2R1AP30153 589 aa25.54■■□□□ 1.68
TRAPPC3-204ENST00000373166 TPTE2Q6XPS3 522 aa25.54■■□□□ 1.68
TRAPPC3-204ENST00000373166 DICER1Q9UPY3 1922 aaKnown RBP25.54■■□□□ 1.68
TRAPPC3-204ENST00000373166 FKBP4Q02790 459 aaKnown RBP eCLIP25.53■■□□□ 1.68
TRAPPC3-204ENST00000373166 RTF1Q92541 710 aaKnown RBP25.53■■□□□ 1.68
TRAPPC3-204ENST00000373166 RSPH6AQ9H0K4 717 aa25.53■■□□□ 1.68
TRAPPC3-204ENST00000373166 SLX4Q8IY92 1834 aa25.53■■□□□ 1.68
TRAPPC3-204ENST00000373166 CNTNAP1P78357 1384 aa25.53■■□□□ 1.68
TRAPPC3-204ENST00000373166 SIPA1L3O60292 1781 aaPredicted RBP25.52■■□□□ 1.68
TRAPPC3-204ENST00000373166 KLRG2A4D1S0 409 aaPredicted RBP25.52■■□□□ 1.68
TRAPPC3-204ENST00000373166 PASKQ96RG2 1323 aa25.52■■□□□ 1.68
TRAPPC3-204ENST00000373166 PRAMEF22A3QJZ6 481 aa25.51■■□□□ 1.67
TRAPPC3-204ENST00000373166 RGL2O15211 777 aa25.51■■□□□ 1.67
TRAPPC3-204ENST00000373166 RTKN2Q8IZC4 609 aa25.51■■□□□ 1.67
TRAPPC3-204ENST00000373166 NIP7Q9Y221 180 aaKnown RBP eCLIP25.51■■□□□ 1.67
TRAPPC3-204ENST00000373166 NUDCQ9Y266 331 aa25.51■■□□□ 1.67
TRAPPC3-204ENST00000373166 EAPPQ56P03 285 aaPredicted RBP25.5■■□□□ 1.67
TRAPPC3-204ENST00000373166 ZNF277Q9NRM2 450 aaPredicted RBP25.5■■□□□ 1.67
TRAPPC3-204ENST00000373166 TMEM88BA6NKF7 163 aa25.49■■□□□ 1.67
TRAPPC3-204ENST00000373166 HACL1Q9UJ83 578 aa25.49■■□□□ 1.67
TRAPPC3-204ENST00000373166 FOXN1O15353 648 aa25.48■■□□□ 1.67
TRAPPC3-204ENST00000373166 MCM10Q7L590 875 aa25.48■■□□□ 1.67
TRAPPC3-204ENST00000373166 AIDAQ96BJ3 306 aa25.48■■□□□ 1.67
TRAPPC3-204ENST00000373166 CLEC11AQ9Y240 323 aa25.48■■□□□ 1.67
TRAPPC3-204ENST00000373166 ZNF541Q9H0D2 1346 aa25.47■■□□□ 1.67
TRAPPC3-204ENST00000373166 ITGBL1O95965 494 aaPredicted RBP25.47■■□□□ 1.67
TRAPPC3-204ENST00000373166 ALDH1B1P30837 517 aa25.47■■□□□ 1.67
TRAPPC3-204ENST00000373166 PRDM10Q9NQV6 1147 aa25.47■■□□□ 1.67
TRAPPC3-204ENST00000373166 BCORQ6W2J9 1755 aa25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 FAM177BA6PVY3 158 aa25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 NBPF26B4DH59 902 aa25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 GTF2E1P29083 439 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 EPHX2P34913 555 aa25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 DDX10Q13206 875 aaKnown RBP25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 NBPF10Q6P3W6 841 aaKnown RBP25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 PNMA8AQ86V59 439 aaPredicted RBP25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 NBPF15Q8N660 670 aa25.46■■□□□ 1.67
TRAPPC3-204ENST00000373166 U2AF1L5P0DN76 240 aaPredicted RBP25.45■■□□□ 1.66
TRAPPC3-204ENST00000373166 VEGFBP49765 207 aa25.45■■□□□ 1.66
TRAPPC3-204ENST00000373166 U2AF1Q01081 240 aaKnown RBP eCLIP25.45■■□□□ 1.66
TRAPPC3-204ENST00000373166 OLFM4Q6UX06 510 aa25.45■■□□□ 1.66
TRAPPC3-204ENST00000373166 ARFGEF2Q9Y6D5 1785 aa25.44■■□□□ 1.66
TRAPPC3-204ENST00000373166 IARSP41252 1262 aaKnown RBP25.44■■□□□ 1.66
TRAPPC3-204ENST00000373166 CTCFP49711 727 aaPredicted RBP25.44■■□□□ 1.66
TRAPPC3-204ENST00000373166 FZD9O00144 591 aa25.43■■□□□ 1.66
TRAPPC3-204ENST00000373166 HTATSF1O43719 755 aaKnown RBP25.43■■□□□ 1.66
TRAPPC3-204ENST00000373166 SYNE4Q8N205 404 aa25.43■■□□□ 1.66
TRAPPC3-204ENST00000373166 SCN4AP35499 1836 aa25.42■■□□□ 1.66
TRAPPC3-204ENST00000373166 CACNA1SQ13698 1873 aa25.41■■□□□ 1.66
TRAPPC3-204ENST00000373166 DCTN1Q14203 1278 aa25.41■■□□□ 1.66
TRAPPC3-204ENST00000373166 HLFQ16534 295 aa25.41■■□□□ 1.66
TRAPPC3-204ENST00000373166 CNTROBQ8N137 903 aa25.41■■□□□ 1.66
TRAPPC3-204ENST00000373166 GPC2Q8N158 579 aa25.41■■□□□ 1.66
TRAPPC3-204ENST00000373166 JDP2Q8WYK2 163 aa25.41■■□□□ 1.66
TRAPPC3-204ENST00000373166 RNF123Q5XPI4 1314 aa25.4■■□□□ 1.66
TRAPPC3-204ENST00000373166 TAF7Q15545 349 aaPredicted RBP25.4■■□□□ 1.66
TRAPPC3-204ENST00000373166 NYXQ9GZU5 481 aa25.4■■□□□ 1.66
TRAPPC3-204ENST00000373166 MAP1SQ66K74 1059 aaPredicted RBP25.39■■□□□ 1.66
TRAPPC3-204ENST00000373166 PSMD1Q99460 953 aa25.39■■□□□ 1.66
TRAPPC3-204ENST00000373166 WBP1LQ9NX94 342 aa25.39■■□□□ 1.66
TRAPPC3-204ENST00000373166 RALBP1Q15311 655 aa25.38■■□□□ 1.65
TRAPPC3-204ENST00000373166 DEFB115Q30KQ5 88 aa25.38■■□□□ 1.65
TRAPPC3-204ENST00000373166 CC2D2BQ6DHV5 1058 aa25.38■■□□□ 1.65
TRAPPC3-204ENST00000373166 RASSF10A6NK89 507 aa25.37■■□□□ 1.65
TRAPPC3-204ENST00000373166 CRY2Q49AN0 593 aa25.37■■□□□ 1.65
TRAPPC3-204ENST00000373166 ERVV-1B6SEH8 477 aa25.36■■□□□ 1.65
TRAPPC3-204ENST00000373166 EIF6P56537 245 aaKnown RBP25.36■■□□□ 1.65
TRAPPC3-204ENST00000373166 LBX1P52954 281 aa25.35■■□□□ 1.65
TRAPPC3-204ENST00000373166 NGEFQ8N5V2 710 aa25.35■■□□□ 1.65
TRAPPC3-204ENST00000373166 MIS18AQ9NYP9 233 aa25.35■■□□□ 1.65
TRAPPC3-204ENST00000373166 GRIPAP1Q4V328 841 aa25.34■■□□□ 1.65
TRAPPC3-204ENST00000373166 NUTM1Q86Y26 1132 aa25.34■■□□□ 1.65
TRAPPC3-204ENST00000373166 RPGRQ92834 1020 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms