RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 TAOK3Q9H2K8 898 aa17.51■□□□□ 0.39
TRAPPC3-201ENST00000373159 RTF1Q92541 710 aaKnown RBP17.5■□□□□ 0.39
TRAPPC3-201ENST00000373159 RGL2O15211 777 aa17.49■□□□□ 0.39
TRAPPC3-201ENST00000373159 PRPF40BQ6NWY9 871 aaKnown RBP17.49■□□□□ 0.39
TRAPPC3-201ENST00000373159 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
TRAPPC3-201ENST00000373159 PRAMEF22A3QJZ6 481 aa17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 KLRG2A4D1S0 409 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 HTATSF1O43719 755 aaKnown RBP17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 U2AF1L5P0DN76 240 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 U2AF1Q01081 240 aaKnown RBP eCLIP17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 MCM10Q7L590 875 aa17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 NBPF5PQ86XG9 351 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 ZNF652Q9Y2D9 606 aa17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 ANKRD31Q8N7Z5 1873 aa17.48■□□□□ 0.39
TRAPPC3-201ENST00000373159 PIP4K2AP48426 406 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-201ENST00000373159 TPTE2Q6XPS3 522 aa17.47■□□□□ 0.39
TRAPPC3-201ENST00000373159 SIPA1L3O60292 1781 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC3-201ENST00000373159 SCN7AQ01118 1682 aa17.46■□□□□ 0.39
TRAPPC3-201ENST00000373159 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC3-201ENST00000373159 NPR1P16066 1061 aa17.46■□□□□ 0.39
TRAPPC3-201ENST00000373159 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
TRAPPC3-201ENST00000373159 CHADLQ6NUI6 762 aa17.46■□□□□ 0.39
TRAPPC3-201ENST00000373159 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
TRAPPC3-201ENST00000373159 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
TRAPPC3-201ENST00000373159 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
TRAPPC3-201ENST00000373159 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
TRAPPC3-201ENST00000373159 FER1L6Q2WGJ9 1857 aa17.44■□□□□ 0.38
TRAPPC3-201ENST00000373159 DCTN1Q14203 1278 aa17.44■□□□□ 0.38
TRAPPC3-201ENST00000373159 TAF7Q15545 349 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC3-201ENST00000373159 NIP7Q9Y221 180 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRAPPC3-201ENST00000373159 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
TRAPPC3-201ENST00000373159 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC3-201ENST00000373159 CREBZFQ9NS37 354 aa17.43■□□□□ 0.38
TRAPPC3-201ENST00000373159 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
TRAPPC3-201ENST00000373159 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
TRAPPC3-201ENST00000373159 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
TRAPPC3-201ENST00000373159 HSPA1AP0DMV8 641 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-201ENST00000373159 HSPA1BP0DMV9 641 aaKnown RBP17.42■□□□□ 0.38
TRAPPC3-201ENST00000373159 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
TRAPPC3-201ENST00000373159 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
TRAPPC3-201ENST00000373159 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
TRAPPC3-201ENST00000373159 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRAPPC3-201ENST00000373159 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
TRAPPC3-201ENST00000373159 TNS4Q8IZW8 715 aa17.41■□□□□ 0.38
TRAPPC3-201ENST00000373159 DICER1Q9UPY3 1922 aaKnown RBP17.41■□□□□ 0.38
TRAPPC3-201ENST00000373159 ALDH1B1P30837 517 aa17.4■□□□□ 0.38
TRAPPC3-201ENST00000373159 HLFQ16534 295 aa17.4■□□□□ 0.38
TRAPPC3-201ENST00000373159 LDHDQ86WU2 507 aa17.39■□□□□ 0.37
TRAPPC3-201ENST00000373159 TAF1DQ9H5J8 278 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-201ENST00000373159 MIS18AQ9NYP9 233 aa17.39■□□□□ 0.37
TRAPPC3-201ENST00000373159 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
TRAPPC3-201ENST00000373159 ERVV-1B6SEH8 477 aa17.38■□□□□ 0.37
TRAPPC3-201ENST00000373159 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-201ENST00000373159 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-201ENST00000373159 ZNF277Q9NRM2 450 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-201ENST00000373159 PASKQ96RG2 1323 aa17.38■□□□□ 0.37
TRAPPC3-201ENST00000373159 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
TRAPPC3-201ENST00000373159 CRY2Q49AN0 593 aa17.37■□□□□ 0.37
TRAPPC3-201ENST00000373159 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
TRAPPC3-201ENST00000373159 FZD9O00144 591 aa17.36■□□□□ 0.37
TRAPPC3-201ENST00000373159 ITGBL1O95965 494 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-201ENST00000373159 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
TRAPPC3-201ENST00000373159 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
TRAPPC3-201ENST00000373159 MKRN1Q9UHC7 482 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-201ENST00000373159 NEFMP07197 916 aa17.35■□□□□ 0.37
TRAPPC3-201ENST00000373159 IARSP41252 1262 aaKnown RBP17.35■□□□□ 0.37
TRAPPC3-201ENST00000373159 HACL1Q9UJ83 578 aa17.35■□□□□ 0.37
TRAPPC3-201ENST00000373159 ZNF541Q9H0D2 1346 aa17.35■□□□□ 0.37
TRAPPC3-201ENST00000373159 EIF4A1P60842 406 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-201ENST00000373159 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
TRAPPC3-201ENST00000373159 MAP3K15Q6ZN16 1313 aa17.34■□□□□ 0.37
TRAPPC3-201ENST00000373159 PNMA8AQ86V59 439 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC3-201ENST00000373159 NGEFQ8N5V2 710 aa17.34■□□□□ 0.37
TRAPPC3-201ENST00000373159 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
TRAPPC3-201ENST00000373159 PSMD1Q99460 953 aa17.34■□□□□ 0.37
TRAPPC3-201ENST00000373159 ARFGEF2Q9Y6D5 1785 aa17.33■□□□□ 0.37
TRAPPC3-201ENST00000373159 CNTNAP1P78357 1384 aa17.33■□□□□ 0.36
TRAPPC3-201ENST00000373159 TMEM88BA6NKF7 163 aa17.33■□□□□ 0.36
TRAPPC3-201ENST00000373159 CAPN15O75808 1086 aa17.33■□□□□ 0.36
TRAPPC3-201ENST00000373159 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC3-201ENST00000373159 EPHX2P34913 555 aa17.33■□□□□ 0.36
TRAPPC3-201ENST00000373159 RRP7AQ9Y3A4 280 aaKnown RBP17.33■□□□□ 0.36
TRAPPC3-201ENST00000373159 GRIPAP1Q4V328 841 aa17.32■□□□□ 0.36
TRAPPC3-201ENST00000373159 EAPPQ56P03 285 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC3-201ENST00000373159 TTLL7Q6ZT98 887 aa17.32■□□□□ 0.36
TRAPPC3-201ENST00000373159 NUTM1Q86Y26 1132 aa17.32■□□□□ 0.36
TRAPPC3-201ENST00000373159 GPC2Q8N158 579 aa17.32■□□□□ 0.36
TRAPPC3-201ENST00000373159 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
TRAPPC3-201ENST00000373159 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
TRAPPC3-201ENST00000373159 JDP2Q8WYK2 163 aa17.31■□□□□ 0.36
TRAPPC3-201ENST00000373159 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
TRAPPC3-201ENST00000373159 SCN4AP35499 1836 aa17.31■□□□□ 0.36
TRAPPC3-201ENST00000373159 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
TRAPPC3-201ENST00000373159 ABCC12Q96J65 1359 aa17.3■□□□□ 0.36
TRAPPC3-201ENST00000373159 ZNF34Q8IZ26 560 aa17.3■□□□□ 0.36
TRAPPC3-201ENST00000373159 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
TRAPPC3-201ENST00000373159 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC3-201ENST00000373159 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
TRAPPC3-201ENST00000373159 MYL6BP14649 208 aa17.29■□□□□ 0.36
TRAPPC3-201ENST00000373159 VEGFBP49765 207 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms