RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 AOX1Q06278 1338 aa16.34■□□□□ 0.21
USP49-201ENST00000373006 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
USP49-201ENST00000373006 DIAPH3Q9NSV4 1193 aa16.34■□□□□ 0.21
USP49-201ENST00000373006 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.21
USP49-201ENST00000373006 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.21
USP49-201ENST00000373006 LRMPQ12912 555 aa16.33■□□□□ 0.2
USP49-201ENST00000373006 ME3Q16798 604 aa16.33■□□□□ 0.2
USP49-201ENST00000373006 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
USP49-201ENST00000373006 DRC7Q8IY82 874 aa16.33■□□□□ 0.2
USP49-201ENST00000373006 RIMBP3CA6NJZ7 1639 aa16.33■□□□□ 0.2
USP49-201ENST00000373006 RIMBP3BA6NNM3 1639 aa16.33■□□□□ 0.2
USP49-201ENST00000373006 RIMBP3Q9UFD9 1639 aa16.33■□□□□ 0.2
USP49-201ENST00000373006 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 LIG1P18858 919 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 NRBP1Q9UHY1 535 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 RIMS1Q86UR5 1692 aaKnown RBP16.32■□□□□ 0.2
USP49-201ENST00000373006 ST3GAL1Q11201 340 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 TCEANC2Q96MN5 208 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 EPB41L2O43491 1005 aaKnown RBP16.32■□□□□ 0.2
USP49-201ENST00000373006 LARP1BQ659C4 914 aaKnown RBP16.32■□□□□ 0.2
USP49-201ENST00000373006 CCDC186Q7Z3E2 898 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 C14orf37Q86TY3 774 aa16.32■□□□□ 0.2
USP49-201ENST00000373006 NGDNQ8NEJ9 315 aaKnown RBP16.32■□□□□ 0.2
USP49-201ENST00000373006 GNAT3A8MTJ3 354 aa16.31■□□□□ 0.2
USP49-201ENST00000373006 GOLGA6L6A8MZA4 724 aa16.31■□□□□ 0.2
USP49-201ENST00000373006 UTP14CQ5TAP6 766 aaKnown RBP16.31■□□□□ 0.2
USP49-201ENST00000373006 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
USP49-201ENST00000373006 TFIP11Q9UBB9 837 aaKnown RBP16.31■□□□□ 0.2
USP49-201ENST00000373006 CYP46A1Q9Y6A2 500 aa16.31■□□□□ 0.2
USP49-201ENST00000373006 TUBGCP6Q96RT7 1819 aa16.31■□□□□ 0.2
USP49-201ENST00000373006 C3P01024 1663 aa16.31■□□□□ 0.2
USP49-201ENST00000373006 ANXA1P04083 346 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 POLA2Q14181 598 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
USP49-201ENST00000373006 CDC37L1Q7L3B6 337 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 FAM200AQ8TCP9 573 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 MON2Q7Z3U7 1717 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 OVOS2A0A0J9YW53 1432 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 OVOS2Q6IE36 1432 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 KCNJ4P48050 445 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 TYRO3Q06418 890 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 PEAK1Q9H792 1746 aa16.3■□□□□ 0.2
USP49-201ENST00000373006 NAA30Q147X3 362 aaPredicted RBP16.29■□□□□ 0.2
USP49-201ENST00000373006 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
USP49-201ENST00000373006 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
USP49-201ENST00000373006 ROBO2Q9HCK4 1378 aa16.29■□□□□ 0.2
USP49-201ENST00000373006 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
USP49-201ENST00000373006 TPM3P06753 285 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 KRT85P78386 507 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 TRIM5Q9C035 493 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.28■□□□□ 0.2
USP49-201ENST00000373006 PI4KAP2A4QPH2 592 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 GOLGA6L4A6NEF3 574 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
USP49-201ENST00000373006 PI4KAP1Q8N8J0 262 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 TNMDQ9H2S6 317 aa16.28■□□□□ 0.2
USP49-201ENST00000373006 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
USP49-201ENST00000373006 ANKRD7Q92527 254 aa16.27■□□□□ 0.2
USP49-201ENST00000373006 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
USP49-201ENST00000373006 RICTORQ6R327 1708 aa16.27■□□□□ 0.2
USP49-201ENST00000373006 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.19
USP49-201ENST00000373006 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.19
USP49-201ENST00000373006 PA2G4Q9UQ80 394 aaKnown RBP16.27■□□□□ 0.19
USP49-201ENST00000373006 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 NLRP6P59044 892 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 STK3Q13188 491 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 USP6P35125 1406 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 CTIFO43310 598 aaKnown RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 FAM227BQ96M60 508 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 IGSF1Q8N6C5 1336 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 ZKSCAN1P17029 563 aaPredicted RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 CLASRPQ8N2M8 674 aaKnown RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 GTPBP4Q9BZE4 634 aaKnown RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 CHPF2Q9P2E5 772 aa16.26■□□□□ 0.19
USP49-201ENST00000373006 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
USP49-201ENST00000373006 FLT4P35916 1363 aa16.25■□□□□ 0.19
USP49-201ENST00000373006 NCBP1Q09161 790 aaKnown RBP16.25■□□□□ 0.19
USP49-201ENST00000373006 NECTIN1Q15223 517 aa16.25■□□□□ 0.19
USP49-201ENST00000373006 ZNF592Q92610 1267 aa16.25■□□□□ 0.19
USP49-201ENST00000373006 TNNT1P13805 278 aa16.24■□□□□ 0.19
USP49-201ENST00000373006 LTKP29376 864 aa16.24■□□□□ 0.19
USP49-201ENST00000373006 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
USP49-201ENST00000373006 SPATA32Q96LK8 384 aa16.24■□□□□ 0.19
USP49-201ENST00000373006 TAF6LQ9Y6J9 622 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms