RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 TSHZ3Q63HK5 1081 aa29.07■■■□□ 2.24
SNX21-204ENST00000372542 USP42Q9H9J4 1324 aaKnown RBP29.07■■■□□ 2.24
SNX21-204ENST00000372542 COL15A1P39059 1388 aa29.07■■■□□ 2.24
SNX21-204ENST00000372542 AFDNP55196 1824 aaKnown RBP29.07■■■□□ 2.24
SNX21-204ENST00000372542 RABEP1Q15276 862 aa29.06■■■□□ 2.24
SNX21-204ENST00000372542 KAZALD1Q96I82 304 aa29.06■■■□□ 2.24
SNX21-204ENST00000372542 BICC1Q9H694 974 aaKnown RBP29.06■■■□□ 2.24
SNX21-204ENST00000372542 TOGARAM1Q9Y4F4 1720 aa29.06■■■□□ 2.24
SNX21-204ENST00000372542 LTBP4Q8N2S1 1624 aa29.06■■■□□ 2.24
SNX21-204ENST00000372542 PLCH1Q4KWH8 1693 aa29.06■■■□□ 2.24
SNX21-204ENST00000372542 NUTM1Q86Y26 1132 aa29.06■■■□□ 2.24
SNX21-204ENST00000372542 TRIM6-TRIM34B2RNG4 842 aa29.05■■■□□ 2.24
SNX21-204ENST00000372542 CLASRPQ8N2M8 674 aaKnown RBP29.05■■■□□ 2.24
SNX21-204ENST00000372542 TTC41PQ6P2S7 1318 aa29.04■■■□□ 2.24
SNX21-204ENST00000372542 DISP2A7MBM2 1401 aa29.04■■■□□ 2.24
SNX21-204ENST00000372542 COL16A1Q07092 1604 aaPredicted RBP29.04■■■□□ 2.24
SNX21-204ENST00000372542 TMOD3Q9NYL9 352 aa29.04■■■□□ 2.24
SNX21-204ENST00000372542 RILPL2Q969X0 211 aa29.03■■■□□ 2.24
SNX21-204ENST00000372542 PI4K2BQ8TCG2 481 aa29.02■■■□□ 2.24
SNX21-204ENST00000372542 ESYT1Q9BSJ8 1104 aa29.02■■■□□ 2.24
SNX21-204ENST00000372542 CHMLP26374 656 aa29.01■■■□□ 2.24
SNX21-204ENST00000372542 AK9Q5TCS8 1911 aa29.01■■■□□ 2.24
SNX21-204ENST00000372542 NBPF26B4DH59 902 aa29.01■■■□□ 2.23
SNX21-204ENST00000372542 PIP4K2AP48426 406 aaPredicted RBP29.01■■■□□ 2.23
SNX21-204ENST00000372542 NBPF14Q5TI25 921 aa29.01■■■□□ 2.23
SNX21-204ENST00000372542 NBPF10Q6P3W6 841 aaKnown RBP29.01■■■□□ 2.23
SNX21-204ENST00000372542 NBPF15Q8N660 670 aa29.01■■■□□ 2.23
SNX21-204ENST00000372542 CHMP5Q9NZZ3 219 aa29.01■■■□□ 2.23
SNX21-204ENST00000372542 G3BP1Q13283 466 aaKnown RBP eCLIP29■■■□□ 2.23
SNX21-204ENST00000372542 GPATCH3Q96I76 525 aa29■■■□□ 2.23
SNX21-204ENST00000372542 NUP188Q5SRE5 1749 aa28.99■■■□□ 2.23
SNX21-204ENST00000372542 EPB41L2O43491 1005 aaKnown RBP28.99■■■□□ 2.23
SNX21-204ENST00000372542 LRP6O75581 1613 aa28.99■■■□□ 2.23
SNX21-204ENST00000372542 K7ELQ4 463 aaPredicted RBP28.99■■■□□ 2.23
SNX21-204ENST00000372542 GLRX3O76003 335 aaKnown RBP28.98■■■□□ 2.23
SNX21-204ENST00000372542 TEX13AQ9BXU3 409 aaPredicted RBP28.98■■■□□ 2.23
SNX21-204ENST00000372542 PA2G4Q9UQ80 394 aaKnown RBP28.98■■■□□ 2.23
SNX21-204ENST00000372542 VSIG10Q8N0Z9 540 aa28.97■■■□□ 2.23
SNX21-204ENST00000372542 CNTROBQ8N137 903 aa28.97■■■□□ 2.23
SNX21-204ENST00000372542 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
SNX21-204ENST00000372542 PTCD1O75127 700 aaKnown RBP28.97■■■□□ 2.23
SNX21-204ENST00000372542 FRAT2O75474 233 aaPredicted RBP28.96■■■□□ 2.23
SNX21-204ENST00000372542 IFIT2P09913 472 aaKnown RBP28.96■■■□□ 2.23
SNX21-204ENST00000372542 SPRYD3Q8NCJ5 442 aa28.96■■■□□ 2.23
SNX21-204ENST00000372542 RABL6Q3YEC7 729 aaPredicted RBP28.95■■■□□ 2.23
SNX21-204ENST00000372542 UNC5CLQ8IV45 518 aa28.95■■■□□ 2.23
SNX21-204ENST00000372542 RBM42Q9BTD8 480 aaKnown RBP28.95■■■□□ 2.23
SNX21-204ENST00000372542 ITGB4P16144 1822 aa28.95■■■□□ 2.22
SNX21-204ENST00000372542 MCCP23508 829 aa28.94■■■□□ 2.22
SNX21-204ENST00000372542 ECHDC1Q9NTX5 307 aa28.94■■■□□ 2.22
SNX21-204ENST00000372542 PHLPP1O60346 1717 aa28.94■■■□□ 2.22
SNX21-204ENST00000372542 A1BGP04217 495 aa28.94■■■□□ 2.22
SNX21-204ENST00000372542 CIZ1Q9ULV3 898 aaPredicted RBP28.94■■■□□ 2.22
SNX21-204ENST00000372542 A0A087WZG4 1122 aa28.93■■■□□ 2.22
SNX21-204ENST00000372542 UBE3BQ7Z3V4 1068 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 COPRSQ9NQ92 184 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 ATP5J2-PTCD1G3V325 749 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 SASH1O94885 1247 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 DDIT3P35638 169 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 CASP7P55210 303 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 EPHA10Q5JZY3 1008 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 PIGBQ92521 554 aa28.92■■■□□ 2.22
SNX21-204ENST00000372542 CDCA7Q9BWT1 371 aaPredicted RBP28.92■■■□□ 2.22
SNX21-204ENST00000372542 CD2BP2O95400 341 aaKnown RBP28.91■■■□□ 2.22
SNX21-204ENST00000372542 TTLL7Q6ZT98 887 aa28.91■■■□□ 2.22
SNX21-204ENST00000372542 AACSQ86V21 672 aa28.91■■■□□ 2.22
SNX21-204ENST00000372542 H7C1W4 665 aa28.9■■■□□ 2.22
SNX21-204ENST00000372542 EXOC5O00471 708 aa28.9■■■□□ 2.22
SNX21-204ENST00000372542 ST18O60284 1047 aa28.9■■■□□ 2.22
SNX21-204ENST00000372542 CWC25Q9NXE8 425 aaPredicted RBP28.9■■■□□ 2.22
SNX21-204ENST00000372542 DEKP35659 375 aaKnown RBP28.9■■■□□ 2.22
SNX21-204ENST00000372542 ANAPC15P60006 121 aa28.9■■■□□ 2.22
SNX21-204ENST00000372542 HSP90AA1P07900 732 aaKnown RBP28.88■■■□□ 2.21
SNX21-204ENST00000372542 CCDC191Q8NCU4 936 aa28.88■■■□□ 2.21
SNX21-204ENST00000372542 IL27Q8NEV9 243 aa28.88■■■□□ 2.21
SNX21-204ENST00000372542 ANO2Q9NQ90 1003 aa28.88■■■□□ 2.21
SNX21-204ENST00000372542 ATG3Q9NT62 314 aa28.88■■■□□ 2.21
SNX21-204ENST00000372542 RFX5P48382 616 aaPredicted RBP28.87■■■□□ 2.21
SNX21-204ENST00000372542 BCL9O00512 1426 aa28.87■■■□□ 2.21
SNX21-204ENST00000372542 NRAPQ86VF7 1730 aa28.87■■■□□ 2.21
SNX21-204ENST00000372542 IL17RAQ96F46 866 aa28.87■■■□□ 2.21
SNX21-204ENST00000372542 ASAP1Q9ULH1 1129 aa28.87■■■□□ 2.21
SNX21-204ENST00000372542 THRAP3Q9Y2W1 955 aaKnown RBP28.87■■■□□ 2.21
SNX21-204ENST00000372542 TJP1Q07157 1748 aa28.87■■■□□ 2.21
SNX21-204ENST00000372542 STARD3NLO95772 234 aa28.86■■■□□ 2.21
SNX21-204ENST00000372542 EAF2Q96CJ1 260 aaPredicted RBP28.85■■■□□ 2.21
SNX21-204ENST00000372542 MAP4K4O95819 1239 aaPredicted RBP28.85■■■□□ 2.21
SNX21-204ENST00000372542 SIL1Q9H173 461 aa28.85■■■□□ 2.21
SNX21-204ENST00000372542 SGSM2O43147 1006 aa28.84■■■□□ 2.21
SNX21-204ENST00000372542 PTPN12Q05209 780 aaKnown RBP28.84■■■□□ 2.21
SNX21-204ENST00000372542 EVI5LQ96CN4 794 aa28.84■■■□□ 2.21
SNX21-204ENST00000372542 RUFY2Q8WXA3 655 aa28.83■■■□□ 2.21
SNX21-204ENST00000372542 ZBTB3Q9H5J0 574 aa28.83■■■□□ 2.21
SNX21-204ENST00000372542 DNAJC10Q8IXB1 793 aa28.83■■■□□ 2.21
SNX21-204ENST00000372542 JARID2Q92833 1246 aaPredicted RBP28.83■■■□□ 2.21
SNX21-204ENST00000372542 FOXO4P98177 505 aa28.81■■■□□ 2.2
SNX21-204ENST00000372542 KLHDC4Q8TBB5 520 aa28.81■■■□□ 2.2
SNX21-204ENST00000372542 SPATA31A1Q5TZJ5 1347 aa28.81■■■□□ 2.2
SNX21-204ENST00000372542 KIF6Q6ZMV9 814 aa28.8■■■□□ 2.2
SNX21-204ENST00000372542 ISCA1Q9BUE6 129 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms