RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 COL18A1P39060 1754 aa21.9■■□□□ 1.1
CD40-201ENST00000372276 CPDO75976 1380 aa21.9■■□□□ 1.1
CD40-201ENST00000372276 TNS3Q68CZ2 1445 aa21.9■■□□□ 1.1
CD40-201ENST00000372276 RAD50Q92878 1312 aa21.9■■□□□ 1.1
CD40-201ENST00000372276 MRC1P22897 1456 aa21.89■■□□□ 1.1
CD40-201ENST00000372276 IFIT2P09913 472 aaKnown RBP21.89■■□□□ 1.09
CD40-201ENST00000372276 ZC3H6P61129 1189 aaKnown RBP21.89■■□□□ 1.09
CD40-201ENST00000372276 DDX49Q9Y6V7 483 aaKnown RBP21.89■■□□□ 1.09
CD40-201ENST00000372276 G3BP1Q13283 466 aaKnown RBP eCLIP21.88■■□□□ 1.09
CD40-201ENST00000372276 SNRPA1P09661 255 aaKnown RBP21.88■■□□□ 1.09
CD40-201ENST00000372276 RIC3Q7Z5B4 369 aa21.88■■□□□ 1.09
CD40-201ENST00000372276 UNC5CLQ8IV45 518 aa21.88■■□□□ 1.09
CD40-201ENST00000372276 EVI5LQ96CN4 794 aa21.88■■□□□ 1.09
CD40-201ENST00000372276 COL15A1P39059 1388 aa21.87■■□□□ 1.09
CD40-201ENST00000372276 ANXA1P04083 346 aa21.87■■□□□ 1.09
CD40-201ENST00000372276 PDIA6Q15084 440 aa21.87■■□□□ 1.09
CD40-201ENST00000372276 TTC5Q8N0Z6 440 aa21.87■■□□□ 1.09
CD40-201ENST00000372276 DIAPH3Q9NSV4 1193 aa21.87■■□□□ 1.09
CD40-201ENST00000372276 CSB-PGBD3P0DP91 1061 aa21.86■■□□□ 1.09
CD40-201ENST00000372276 ILDR1Q86SU0 546 aaPredicted RBP21.86■■□□□ 1.09
CD40-201ENST00000372276 KDM6AO15550 1401 aaPredicted RBP21.85■■□□□ 1.09
CD40-201ENST00000372276 PKD1L3Q7Z443 1732 aa21.85■■□□□ 1.09
CD40-201ENST00000372276 PLEKHG5O94827 1062 aa21.85■■□□□ 1.09
CD40-201ENST00000372276 PROSER3Q2NL68 480 aa21.85■■□□□ 1.09
CD40-201ENST00000372276 METTL22Q9BUU2 404 aaPredicted RBP21.85■■□□□ 1.09
CD40-201ENST00000372276 ERBB4Q15303 1308 aa21.85■■□□□ 1.09
CD40-201ENST00000372276 MCTP1Q6DN14 999 aa21.84■■□□□ 1.09
CD40-201ENST00000372276 FMNL2Q96PY5 1086 aa21.84■■□□□ 1.09
CD40-201ENST00000372276 LSG1Q9H089 658 aaKnown RBP21.84■■□□□ 1.09
CD40-201ENST00000372276 SPATA31A3Q5VYP0 1347 aa21.83■■□□□ 1.09
CD40-201ENST00000372276 MBD3O95983 291 aa21.83■■□□□ 1.08
CD40-201ENST00000372276 PDIA4P13667 645 aaKnown RBP21.83■■□□□ 1.08
CD40-201ENST00000372276 ZNF445P59923 1031 aa21.83■■□□□ 1.08
CD40-201ENST00000372276 PIP4K2BP78356 416 aa21.83■■□□□ 1.08
CD40-201ENST00000372276 ZGPATQ8N5A5 531 aaKnown RBP21.83■■□□□ 1.08
CD40-201ENST00000372276 LMBRD1Q9NUN5 540 aa21.83■■□□□ 1.08
CD40-201ENST00000372276 SLAIN2Q9P270 581 aa21.83■■□□□ 1.08
CD40-201ENST00000372276 PALD1Q9ULE6 856 aa21.83■■□□□ 1.08
CD40-201ENST00000372276 BRD1O95696 1058 aa21.82■■□□□ 1.08
CD40-201ENST00000372276 ANP32BQ92688 251 aaKnown RBP21.82■■□□□ 1.08
CD40-201ENST00000372276 TM6SF1Q9BZW5 370 aa21.82■■□□□ 1.08
CD40-201ENST00000372276 PARP4Q9UKK3 1724 aaKnown RBP21.82■■□□□ 1.08
CD40-201ENST00000372276 NEURL1BA8MQ27 555 aa21.81■■□□□ 1.08
CD40-201ENST00000372276 CWF19L2Q2TBE0 894 aaKnown RBP21.81■■□□□ 1.08
CD40-201ENST00000372276 NFATC2IPQ8NCF5 419 aa21.81■■□□□ 1.08
CD40-201ENST00000372276 SUCLG2Q96I99 432 aa21.81■■□□□ 1.08
CD40-201ENST00000372276 MEGF6O75095 1541 aa21.81■■□□□ 1.08
CD40-201ENST00000372276 GCKRQ14397 625 aa21.8■■□□□ 1.08
CD40-201ENST00000372276 ANKRD13DQ6ZTN6 518 aa21.8■■□□□ 1.08
CD40-201ENST00000372276 KCNB2Q92953 911 aa21.8■■□□□ 1.08
CD40-201ENST00000372276 WDR33Q9C0J8 1336 aaKnown RBP21.8■■□□□ 1.08
CD40-201ENST00000372276 AACSQ86V21 672 aa21.8■■□□□ 1.08
CD40-201ENST00000372276 TICAM2Q86XR7 235 aa21.8■■□□□ 1.08
CD40-201ENST00000372276 BICC1Q9H694 974 aaKnown RBP21.8■■□□□ 1.08
CD40-201ENST00000372276 ZDHHC9Q9Y397 364 aa21.8■■□□□ 1.08
CD40-201ENST00000372276 AIMP1Q12904 312 aaKnown RBP21.79■■□□□ 1.08
CD40-201ENST00000372276 XAGE3Q8WTP9 111 aa21.79■■□□□ 1.08
CD40-201ENST00000372276 ZSCAN31Q96LW9 406 aaPredicted RBP21.79■■□□□ 1.08
CD40-201ENST00000372276 SNRKQ9NRH2 765 aa21.79■■□□□ 1.08
CD40-201ENST00000372276 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.79■■□□□ 1.08
CD40-201ENST00000372276 SNX14Q9Y5W7 946 aa21.79■■□□□ 1.08
CD40-201ENST00000372276 C5P01031 1676 aa21.78■■□□□ 1.08
CD40-201ENST00000372276 IGKV5-2P06315 115 aa21.78■■□□□ 1.08
CD40-201ENST00000372276 CABP4P57796 275 aa21.78■■□□□ 1.08
CD40-201ENST00000372276 COPS6Q7L5N1 327 aa21.78■■□□□ 1.08
CD40-201ENST00000372276 KLHL34Q8N239 644 aa21.78■■□□□ 1.08
CD40-201ENST00000372276 LIMCH1Q9UPQ0 1083 aa21.78■■□□□ 1.08
CD40-201ENST00000372276 PRAMEF22A3QJZ6 481 aa21.77■■□□□ 1.08
CD40-201ENST00000372276 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
CD40-201ENST00000372276 ZNF496Q96IT1 587 aaPredicted RBP21.77■■□□□ 1.08
CD40-201ENST00000372276 COPRSQ9NQ92 184 aa21.77■■□□□ 1.08
CD40-201ENST00000372276 ZKSCAN1P17029 563 aaPredicted RBP21.77■■□□□ 1.07
CD40-201ENST00000372276 SLC39A6Q13433 755 aa21.77■■□□□ 1.07
CD40-201ENST00000372276 KAZALD1Q96I82 304 aa21.77■■□□□ 1.07
CD40-201ENST00000372276 MAP4K4O95819 1239 aaPredicted RBP21.76■■□□□ 1.07
CD40-201ENST00000372276 TTC14Q96N46 770 aa21.76■■□□□ 1.07
CD40-201ENST00000372276 SH2B1Q9NRF2 756 aaPredicted RBP21.76■■□□□ 1.07
CD40-201ENST00000372276 LAMB4A4D0S4 1761 aa21.75■■□□□ 1.07
CD40-201ENST00000372276 SASH1O94885 1247 aa21.75■■□□□ 1.07
CD40-201ENST00000372276 VPS53Q5VIR6 699 aa21.75■■□□□ 1.07
CD40-201ENST00000372276 PLBD2Q8NHP8 589 aa21.75■■□□□ 1.07
CD40-201ENST00000372276 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
CD40-201ENST00000372276 RFX7Q2KHR2 1363 aa21.75■■□□□ 1.07
CD40-201ENST00000372276 ERVV-2B6SEH9 535 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 CYP27B1O15528 508 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 PRPF40AO75400 957 aaKnown RBP21.74■■□□□ 1.07
CD40-201ENST00000372276 NCLP19338 710 aaKnown RBP21.74■■□□□ 1.07
CD40-201ENST00000372276 PSMA5P28066 241 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 PKP1Q13835 747 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 MYD88Q99836 296 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 PA2G4Q9UQ80 394 aaKnown RBP21.74■■□□□ 1.07
CD40-201ENST00000372276 ATP6V1DQ9Y5K8 247 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 PCDH11XQ9BZA7 1347 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 PCDH11YQ9BZA8 1340 aa21.74■■□□□ 1.07
CD40-201ENST00000372276 MYL6BP14649 208 aa21.73■■□□□ 1.07
CD40-201ENST00000372276 CCDC173Q0VFZ6 552 aa21.73■■□□□ 1.07
CD40-201ENST00000372276 RABL6Q3YEC7 729 aaPredicted RBP21.73■■□□□ 1.07
CD40-201ENST00000372276 RNF20Q5VTR2 975 aa21.73■■□□□ 1.07
CD40-201ENST00000372276 LRP10Q7Z4F1 713 aa21.73■■□□□ 1.07
CD40-201ENST00000372276 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms