RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 IGSF5Q9NSI5 407 aa10.72□□□□□ -0.69
ATG4A-203ENST00000372232 FEZ2Q9UHY8 353 aaPredicted RBP10.72□□□□□ -0.69
ATG4A-203ENST00000372232 C3P01024 1663 aa10.72□□□□□ -0.69
ATG4A-203ENST00000372232 ADAMTS13Q76LX8 1427 aa10.71□□□□□ -0.69
ATG4A-203ENST00000372232 CPS1P31327 1500 aa10.71□□□□□ -0.69
ATG4A-203ENST00000372232 RLBP1P12271 317 aa10.71□□□□□ -0.69
ATG4A-203ENST00000372232 TMEM259Q4ZIN3 620 aa10.71□□□□□ -0.69
ATG4A-203ENST00000372232 KNDC1Q76NI1 1749 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 UBR1Q8IWV7 1749 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 SMC5Q8IY18 1101 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 ROBO2Q9HCK4 1378 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 LTKP29376 864 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 TERF2Q15554 542 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 CLEC17AQ6ZS10 378 aa10.7□□□□□ -0.7
ATG4A-203ENST00000372232 AATKQ6ZMQ8 1374 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 PLEKHG1Q9ULL1 1385 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 EXOSC9Q06265 439 aaKnown RBP10.69□□□□□ -0.7
ATG4A-203ENST00000372232 PPP2R2DQ66LE6 453 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
ATG4A-203ENST00000372232 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 RBSNQ9H1K0 784 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 TNNQ9UQP3 1299 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 EMILIN1Q9Y6C2 1016 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 PRR36Q9H6K5 1346 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 LOC102724159A0A0B4J2E5 919 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 PHF14O94880 888 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 PRKAR2BP31323 418 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 PWP2Q15269 919 aaKnown RBP10.69□□□□□ -0.7
ATG4A-203ENST00000372232 CREBRFQ8IUR6 639 aa10.69□□□□□ -0.7
ATG4A-203ENST00000372232 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 KIF3CO14782 793 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 IL13P35225 146 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 CEP120Q8N960 986 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 COG3Q96JB2 828 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 KIAA1522Q9P206 1035 aaPredicted RBP10.68□□□□□ -0.7
ATG4A-203ENST00000372232 LRRC7Q96NW7 1537 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 QPCTQ16769 361 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 TSR1Q2NL82 804 aaKnown RBP10.68□□□□□ -0.7
ATG4A-203ENST00000372232 PIBF1Q8WXW3 757 aa10.68□□□□□ -0.7
ATG4A-203ENST00000372232 CTIFO43310 598 aaKnown RBP10.67□□□□□ -0.7
ATG4A-203ENST00000372232 NOP2P46087 812 aaKnown RBP10.67□□□□□ -0.7
ATG4A-203ENST00000372232 VRTNQ9H8Y1 702 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 PCDHB15Q9Y5E8 787 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 GOLGA6L22H0YM25 854 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
ATG4A-203ENST00000372232 PMFBP1Q8TBY8 1022 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 SSH1Q8WYL5 1049 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 SNX21Q969T3 373 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 PHACTR3Q96KR7 559 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 MYCBPQ99417 103 aaPredicted RBP10.67□□□□□ -0.7
ATG4A-203ENST00000372232 PPP1R12CQ9BZL4 782 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 SMC4Q9NTJ3 1288 aa10.67□□□□□ -0.7
ATG4A-203ENST00000372232 DDX41Q9UJV9 622 aaKnown RBP10.67□□□□□ -0.7
ATG4A-203ENST00000372232 MORC2Q9Y6X9 1032 aaPredicted RBP10.67□□□□□ -0.7
ATG4A-203ENST00000372232 CDK12Q9NYV4 1490 aaPredicted RBP10.67□□□□□ -0.7
ATG4A-203ENST00000372232 EVI5O60447 810 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 HMOX1P09601 288 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 FKBP5Q13451 457 aaPredicted RBP10.66□□□□□ -0.7
ATG4A-203ENST00000372232 CTR9Q6PD62 1173 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 DZIP1LQ8IYY4 767 aaKnown RBP10.66□□□□□ -0.7
ATG4A-203ENST00000372232 C22orf23Q9BZE7 217 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.66□□□□□ -0.7
ATG4A-203ENST00000372232 DDX49Q9Y6V7 483 aaKnown RBP10.66□□□□□ -0.7
ATG4A-203ENST00000372232 RRS1Q15050 365 aaKnown RBP10.66□□□□□ -0.7
ATG4A-203ENST00000372232 NFE2L2Q16236 605 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 ZSCAN23Q3MJ62 389 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 NCAPGQ9BPX3 1015 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 SPTLC3Q9NUV7 552 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 CTNNA3Q9UI47 895 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 EID1Q9Y6B2 187 aa10.66□□□□□ -0.7
ATG4A-203ENST00000372232 FAM177BA6PVY3 158 aa10.65□□□□□ -0.7
ATG4A-203ENST00000372232 AP1G2O75843 785 aa10.65□□□□□ -0.7
ATG4A-203ENST00000372232 TRIM27P14373 513 aa10.65□□□□□ -0.7
ATG4A-203ENST00000372232 NOLC1Q14978 699 aaKnown RBP eCLIP10.65□□□□□ -0.7
ATG4A-203ENST00000372232 TMED8Q6PL24 325 aaPredicted RBP10.65□□□□□ -0.7
ATG4A-203ENST00000372232 EGFL6Q8IUX8 553 aa10.65□□□□□ -0.7
ATG4A-203ENST00000372232 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.7
ATG4A-203ENST00000372232 SLC26A8Q96RN1 970 aa10.65□□□□□ -0.7
ATG4A-203ENST00000372232 MON2Q7Z3U7 1717 aa10.65□□□□□ -0.7
ATG4A-203ENST00000372232 MAP2P11137 1827 aaKnown RBP10.65□□□□□ -0.71
ATG4A-203ENST00000372232 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
ATG4A-203ENST00000372232 SYCP1Q15431 976 aa10.64□□□□□ -0.71
ATG4A-203ENST00000372232 PTPRUQ92729 1446 aa10.64□□□□□ -0.71
ATG4A-203ENST00000372232 MAP3K7O43318 606 aa10.64□□□□□ -0.71
ATG4A-203ENST00000372232 MCCP23508 829 aa10.64□□□□□ -0.71
ATG4A-203ENST00000372232 RIC3Q7Z5B4 369 aa10.64□□□□□ -0.71
ATG4A-203ENST00000372232 LMTK3Q96Q04 1460 aa10.64□□□□□ -0.71
ATG4A-203ENST00000372232 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.64□□□□□ -0.71
ATG4A-203ENST00000372232 PALM3A6NDB9 673 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-203ENST00000372232 GTF2A1P52655 376 aaPredicted RBP10.63□□□□□ -0.71
ATG4A-203ENST00000372232 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 DIAPH3Q9NSV4 1193 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
ATG4A-203ENST00000372232 ACEP12821 1306 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 TTC21BQ7Z4L5 1316 aa10.63□□□□□ -0.71
ATG4A-203ENST00000372232 SLIT1O75093 1534 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms