RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 ERLIN2O94905 339 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 GSDMDP57764 484 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 HAND2P61296 217 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 DNM1Q05193 864 aaKnown RBP8.96□□□□□ -0.98
COL21A1-203ENST00000370819 CEP135Q66GS9 1140 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 BRF1Q92994 677 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 PLCD4Q9BRC7 762 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 LRRC2Q9BYS8 371 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 GBP3Q9H0R5 595 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 C14orf93Q9H972 538 aaKnown RBP8.96□□□□□ -0.98
COL21A1-203ENST00000370819 PRDM11Q9NQV5 511 aa8.96□□□□□ -0.98
COL21A1-203ENST00000370819 GRIN2AQ12879 1464 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 A0A087WZG4 1122 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 WASLO00401 505 aaPredicted RBP8.95□□□□□ -0.98
COL21A1-203ENST00000370819 IGSF3O75054 1194 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 HMGB1P09429 215 aaKnown RBP8.95□□□□□ -0.98
COL21A1-203ENST00000370819 FBXO31Q5XUX0 539 aaPredicted RBP8.95□□□□□ -0.98
COL21A1-203ENST00000370819 TSPYL6Q8N831 410 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 ZBTB40Q9NUA8 1239 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.95□□□□□ -0.98
COL21A1-203ENST00000370819 V9GYY5 206 aaPredicted RBP8.95□□□□□ -0.98
COL21A1-203ENST00000370819 IQGAP2Q13576 1575 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 NOS1P29475 1434 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 GOLIM4O00461 696 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 CASQ1P31415 396 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 SYCP1Q15431 976 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 ANO6Q4KMQ2 910 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 FAM200AQ8TCP9 573 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 CALCOCO1Q9P1Z2 691 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 ORC3Q9UBD5 711 aaPredicted RBP8.95□□□□□ -0.98
COL21A1-203ENST00000370819 USP16Q9Y5T5 823 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 NEFHP12036 1026 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 SKILP12757 684 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 CCDC148Q8NFR7 591 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 NEK1Q96PY6 1258 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 NAPBQ9H115 298 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 ZNF213O14771 459 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 DNA2P51530 1060 aa8.95□□□□□ -0.98
COL21A1-203ENST00000370819 JARID2Q92833 1246 aaPredicted RBP8.95□□□□□ -0.98
COL21A1-203ENST00000370819 GNG11P61952 73 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 HSP90AA4PQ58FG1 418 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 IQCEQ6IPM2 695 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 MRPL50Q8N5N7 158 aaKnown RBP8.94□□□□□ -0.98
COL21A1-203ENST00000370819 NUP160Q12769 1436 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 CEP170Q5SW79 1584 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 KRT24Q2M2I5 525 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 DNAJC25Q9H1X3 360 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 CEP131Q9UPN4 1083 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 MAP3K2Q9Y2U5 619 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 IBSPP21815 317 aaPredicted RBP8.94□□□□□ -0.98
COL21A1-203ENST00000370819 UBE3BQ7Z3V4 1068 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 CCDC144CPQ8IYA2 1237 aa8.94□□□□□ -0.98
COL21A1-203ENST00000370819 BMP2KQ9NSY1 1161 aaPredicted RBP8.94□□□□□ -0.98
COL21A1-203ENST00000370819 RALGAPBQ86X10 1494 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 NSD2O96028 1365 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 ATP5J2-PTCD1G3V325 749 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 CAVIN2O95810 425 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 ANAPC15P60006 121 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 BMS1Q14692 1282 aaKnown RBP8.93□□□□□ -0.98
COL21A1-203ENST00000370819 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 CARD14Q9BXL6 1004 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 DCTPP1Q9H773 170 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 RBM8AQ9Y5S9 174 aaKnown RBP8.93□□□□□ -0.98
COL21A1-203ENST00000370819 IFIT3O14879 490 aaKnown RBP8.93□□□□□ -0.98
COL21A1-203ENST00000370819 VAMP4O75379 141 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 USP8P40818 1118 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 DDX46Q7L014 1031 aaKnown RBP8.93□□□□□ -0.98
COL21A1-203ENST00000370819 MICU3Q86XE3 530 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 TAF4BQ92750 862 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 PAXBP1Q9Y5B6 917 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 F13A1P00488 732 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 ENOX2Q16206 610 aaKnown RBP8.93□□□□□ -0.98
COL21A1-203ENST00000370819 PLEKHM2Q8IWE5 1019 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 TXLNBQ8N3L3 684 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 SEPT11Q9NVA2 429 aaKnown RBP8.93□□□□□ -0.98
COL21A1-203ENST00000370819 AKAP2Q9Y2D5 859 aa8.93□□□□□ -0.98
COL21A1-203ENST00000370819 SHROOM2Q13796 1616 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 CCDC196A0A1B0GTZ2 297 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 SPA17Q15506 151 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 NUP88Q99567 741 aaPredicted RBP8.92□□□□□ -0.98
COL21A1-203ENST00000370819 DNAI1Q9UI46 699 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 GOLGA8AA7E2F4 631 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 LMAN1P49257 510 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 KRT222Q8N1A0 295 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 ZFP91Q96JP5 570 aaPredicted RBP8.92□□□□□ -0.98
COL21A1-203ENST00000370819 RBSNQ9H1K0 784 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 RNF216Q9NWF9 866 aaPredicted RBP8.92□□□□□ -0.98
COL21A1-203ENST00000370819 DMRT2Q9Y5R5 561 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 SLC12A7Q9Y666 1083 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 ASXL1Q8IXJ9 1541 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 FOXO3O43524 673 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 KCNH5Q8NCM2 988 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 CCDC12Q8WUD4 166 aaPredicted RBP8.92□□□□□ -0.98
COL21A1-203ENST00000370819 ZBTB3Q9H5J0 574 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 HYPKQ9NX55 129 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.92□□□□□ -0.98
COL21A1-203ENST00000370819 CLASP1Q7Z460 1538 aa8.92□□□□□ -0.98
COL21A1-203ENST00000370819 PTGS1P23219 599 aa8.91□□□□□ -0.98
COL21A1-203ENST00000370819 IARSP41252 1262 aaKnown RBP8.91□□□□□ -0.98
COL21A1-203ENST00000370819 USP5P45974 858 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms