RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CATIPQ7Z7H3 387 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 DZIP1Q86YF9 867 aaKnown RBP14.32□□□□□ -0.12
HCFC1-202ENST00000369984 KIF20AO95235 890 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 CALML4Q96GE6 196 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 TIGD1Q96MW7 591 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 MIS18AQ9NYP9 233 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 CASKIN1Q8WXD9 1431 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 NLRP5P59047 1200 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 AMPD3Q01432 767 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 CCDC96Q2M329 555 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 LIMCH1Q9UPQ0 1083 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 ZMYND15Q9H091 742 aa14.32□□□□□ -0.12
HCFC1-202ENST00000369984 ISM2Q6H9L7 571 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 C9orf84Q5VXU9 1444 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 SPTY2D1Q68D10 685 aaPredicted RBP14.31□□□□□ -0.12
HCFC1-202ENST00000369984 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 DDX19AQ9NUU7 478 aaKnown RBP14.31□□□□□ -0.12
HCFC1-202ENST00000369984 IFIT1P09914 478 aaKnown RBP14.31□□□□□ -0.12
HCFC1-202ENST00000369984 SSFA2P28290 1259 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 HSPA4P34932 840 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 ZNF444Q8N0Y2 327 aaPredicted RBP14.31□□□□□ -0.12
HCFC1-202ENST00000369984 SREK1Q8WXA9 508 aaKnown RBP14.31□□□□□ -0.12
HCFC1-202ENST00000369984 FERMT1Q9BQL6 677 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 ZNF652Q9Y2D9 606 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
HCFC1-202ENST00000369984 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
HCFC1-202ENST00000369984 EHMT1Q9H9B1 1298 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 CCDC194A0A1B0GVG4 234 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 TCERG1LQ5VWI1 586 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 EHBP1Q8NDI1 1231 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 PAIP2Q9BPZ3 127 aaKnown RBP14.3□□□□□ -0.12
HCFC1-202ENST00000369984 LIG1P18858 919 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 NFE2L2Q16236 605 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 SYCP3Q8IZU3 236 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 FCHSD2O94868 740 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 IFI16Q16666 785 aaKnown RBP14.3□□□□□ -0.12
HCFC1-202ENST00000369984 CCDC12Q8WUD4 166 aaPredicted RBP14.3□□□□□ -0.12
HCFC1-202ENST00000369984 DRC1Q96MC2 740 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 GJB2P29033 226 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 MAP3K12Q12852 859 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 MCM5P33992 734 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 ANKS4BQ8N8V4 417 aa14.3□□□□□ -0.12
HCFC1-202ENST00000369984 BAG4O95429 457 aaKnown RBP14.3□□□□□ -0.12
HCFC1-202ENST00000369984 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
HCFC1-202ENST00000369984 CCDC144CPQ8IYA2 1237 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 ZSWIM4Q9H7M6 989 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 TCP11L1Q9NUJ3 509 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 CCDC40Q4G0X9 1142 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 PUF60Q9UHX1 559 aaKnown RBP14.29□□□□□ -0.12
HCFC1-202ENST00000369984 DUSP27Q5VZP5 1158 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 WDR66Q8TBY9 1149 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 IFIT3O14879 490 aaKnown RBP14.29□□□□□ -0.12
HCFC1-202ENST00000369984 NUTM2BA6NNL0 878 aaPredicted RBP14.29□□□□□ -0.12
HCFC1-202ENST00000369984 NUTM2EB1AL46 878 aaPredicted RBP14.29□□□□□ -0.12
HCFC1-202ENST00000369984 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 KANK3Q6NY19 840 aa14.29□□□□□ -0.12
HCFC1-202ENST00000369984 NUTM2AQ8IVF1 878 aaPredicted RBP14.29□□□□□ -0.12
HCFC1-202ENST00000369984 LARP6Q9BRS8 491 aaKnown RBP14.29□□□□□ -0.12
HCFC1-202ENST00000369984 UBE2HP62256 183 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 CKAP4Q07065 602 aaKnown RBP14.28□□□□□ -0.12
HCFC1-202ENST00000369984 SSX2IPQ9Y2D8 614 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 KIAA0753Q2KHM9 967 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 FBF1Q8TES7 1133 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 PRC1O43663 620 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 STX6O43752 255 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 MYO1BO43795 1136 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 DDX12PQ92771 950 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 MAP3K9P80192 1104 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 ATP2C2O75185 946 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 GNG11P61952 73 aa14.28□□□□□ -0.12
HCFC1-202ENST00000369984 NSRP1Q9H0G5 558 aaKnown RBP14.28□□□□□ -0.12
HCFC1-202ENST00000369984 FAM135AQ9P2D6 1515 aa14.27□□□□□ -0.12
HCFC1-202ENST00000369984 KIF4AO95239 1232 aa14.27□□□□□ -0.12
HCFC1-202ENST00000369984 MXRA7P84157 204 aa14.27□□□□□ -0.12
HCFC1-202ENST00000369984 TBC1D5Q92609 795 aa14.27□□□□□ -0.12
HCFC1-202ENST00000369984 RNF41Q9H4P4 317 aaPredicted RBP14.27□□□□□ -0.12
HCFC1-202ENST00000369984 PYM1Q9BRP8 204 aaKnown RBP14.27□□□□□ -0.12
HCFC1-202ENST00000369984 IVLP07476 585 aa14.27□□□□□ -0.12
HCFC1-202ENST00000369984 MSL1Q68DK7 614 aa14.27□□□□□ -0.12
HCFC1-202ENST00000369984 ZPR1O75312 459 aa14.27□□□□□ -0.13
HCFC1-202ENST00000369984 PRIMPOLQ96LW4 560 aa14.27□□□□□ -0.13
HCFC1-202ENST00000369984 ARFGAP3Q9NP61 516 aa14.27□□□□□ -0.13
HCFC1-202ENST00000369984 GOLGA8AA7E2F4 631 aa14.27□□□□□ -0.13
HCFC1-202ENST00000369984 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
HCFC1-202ENST00000369984 CPSF2Q9P2I0 782 aaKnown RBP14.27□□□□□ -0.13
HCFC1-202ENST00000369984 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.13
HCFC1-202ENST00000369984 CCDC6Q16204 474 aa14.27□□□□□ -0.13
HCFC1-202ENST00000369984 ZNF165P49910 485 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 IFIT5Q13325 482 aaKnown RBP14.26□□□□□ -0.13
HCFC1-202ENST00000369984 KRT222Q8N1A0 295 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 GTPBP4Q9BZE4 634 aaKnown RBP14.26□□□□□ -0.13
HCFC1-202ENST00000369984 SLC5A1P13866 664 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 ACTN2P35609 894 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 STXBP4Q6ZWJ1 553 aa14.26□□□□□ -0.13
HCFC1-202ENST00000369984 RBM27Q9P2N5 1060 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms