RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 TMEM57Q8N5G2 664 aa9.88□□□□□ -0.83
LCA5-201ENST00000369846 ANKS4BQ8N8V4 417 aa9.88□□□□□ -0.83
LCA5-201ENST00000369846 FAM76AQ8TAV0 307 aa9.88□□□□□ -0.83
LCA5-201ENST00000369846 RBSNQ9H1K0 784 aa9.88□□□□□ -0.83
LCA5-201ENST00000369846 HIP1O00291 1037 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 TDRD12Q587J7 1177 aaKnown RBP9.87□□□□□ -0.83
LCA5-201ENST00000369846 SAMD9Q5K651 1589 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 CCDC69A6NI79 296 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 STX6O43752 255 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 YEATS4O95619 227 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 PNMA8AQ86V59 439 aaPredicted RBP9.87□□□□□ -0.83
LCA5-201ENST00000369846 TRIM22Q8IYM9 498 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 KDM5CP41229 1560 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 KDM2BQ8NHM5 1336 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 BUB1BO60566 1050 aaPredicted RBP9.87□□□□□ -0.83
LCA5-201ENST00000369846 GNAI2P04899 355 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
LCA5-201ENST00000369846 AIMP1Q12904 312 aaKnown RBP9.87□□□□□ -0.83
LCA5-201ENST00000369846 TWISTNBQ3B726 338 aaPredicted RBP9.87□□□□□ -0.83
LCA5-201ENST00000369846 SAMD1Q6SPF0 538 aaPredicted RBP9.87□□□□□ -0.83
LCA5-201ENST00000369846 NAP1L3Q99457 506 aaPredicted RBP9.87□□□□□ -0.83
LCA5-201ENST00000369846 AMOTL1Q8IY63 956 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 SPINK5Q9NQ38 1064 aaPredicted RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 DDX58O95786 925 aaKnown RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 RBBP5Q15291 538 aaKnown RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 CACNA2D4Q7Z3S7 1137 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 NGDNQ8NEJ9 315 aaKnown RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 DNAJC25Q9H1X3 360 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 MACROD2A1Z1Q3 448 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 CCDC172P0C7W6 258 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 MX1P20591 662 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 POTEDQ86YR6 584 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 POLR1AO95602 1720 aaPredicted RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 FRMD3A2A2Y4 597 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 PRPF4BQ13523 1007 aaKnown RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 DZIP1Q86YF9 867 aaKnown RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 COG3Q96JB2 828 aa9.86□□□□□ -0.83
LCA5-201ENST00000369846 LUC7L2Q9Y383 392 aaKnown RBP9.86□□□□□ -0.83
LCA5-201ENST00000369846 PDS5BQ9NTI5 1447 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 STAMBPO95630 424 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 UBASH3AP57075 661 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 HDXQ7Z353 690 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 LMNTD2Q8IXW0 634 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 PIBF1Q8WXW3 757 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 G3V3G9 751 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 KIF3CO14782 793 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 CAVIN2O95810 425 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 PPARDQ03181 441 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 DCAF8Q5TAQ9 597 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 USP48Q86UV5 1035 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 STIM2Q9P246 746 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 BAIAP2L1Q9UHR4 511 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 EXOC6BQ9Y2D4 811 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 GAPVD1Q14C86 1478 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 OAS2P29728 719 aaKnown RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 LACTBP83111 547 aaPredicted RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 MXRA7P84157 204 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 PDE1CQ14123 709 aaPredicted RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 KARSQ15046 597 aaKnown RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 WHAMMP3Q1A5X7 153 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 UTP14CQ5TAP6 766 aaKnown RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 B4GALNT4Q76KP1 1039 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 PUS7Q96PZ0 661 aaKnown RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 NSRP1Q9H0G5 558 aaKnown RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 GGNBP2Q9H3C7 697 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 SPATS2LQ9NUQ6 558 aaKnown RBP9.85□□□□□ -0.83
LCA5-201ENST00000369846 PLEKHH1Q9ULM0 1364 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 KIAA1107Q9UPP5 1409 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 MBD5Q9P267 1494 aa9.85□□□□□ -0.83
LCA5-201ENST00000369846 IGHDP01880 384 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 SYT1P21579 422 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
LCA5-201ENST00000369846 PPFIBP2Q8ND30 876 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 AFAP1L1Q8TED9 768 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 RBM42Q9BTD8 480 aaKnown RBP9.84□□□□□ -0.83
LCA5-201ENST00000369846 LIMCH1Q9UPQ0 1083 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 LIG3P49916 1009 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 ARFGAP2Q8N6H7 521 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 CTNNBL1Q8WYA6 563 aaPredicted RBP9.84□□□□□ -0.83
LCA5-201ENST00000369846 CNPY2Q9Y2B0 182 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 PRG4Q92954 1404 aaPredicted RBP9.84□□□□□ -0.83
LCA5-201ENST00000369846 FSD2A1L4K1 749 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 SMARCA5O60264 1052 aaPredicted RBP9.84□□□□□ -0.83
LCA5-201ENST00000369846 ZNF428Q96B54 188 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 ALS2CR12Q96Q35 445 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 TACO1Q9BSH4 297 aaKnown RBP9.84□□□□□ -0.83
LCA5-201ENST00000369846 UBAC1Q9BSL1 405 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 DACT1Q9NYF0 836 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.84□□□□□ -0.83
LCA5-201ENST00000369846 DNMBPQ6XZF7 1577 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 TLDC2A0PJX2 215 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 MYO1BO43795 1136 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 RAB11FIP3O75154 756 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 TBC1D9Q6ZT07 1266 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 CNNM3Q8NE01 707 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
LCA5-201ENST00000369846 ZBTB16Q05516 673 aa9.83□□□□□ -0.84
LCA5-201ENST00000369846 SEPT14Q6ZU15 432 aa9.83□□□□□ -0.84
LCA5-201ENST00000369846 LZTFL1Q9NQ48 299 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms