RNA–Protein interactions for RNA: ENST00000367563.7

LINC00272-201, long intergenic non-protein coding RNA 272, humanhuman

TSL 1 (best) BASIC

Gene LINC00272, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00272-201ENST00000367563 TTLL6Q8N841 843 aa11.78□□□□□ -0.52
LINC00272-201ENST00000367563 SLC52A2Q9HAB3 445 aa11.78□□□□□ -0.52
LINC00272-201ENST00000367563 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
LINC00272-201ENST00000367563 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
LINC00272-201ENST00000367563 COL15A1P39059 1388 aa11.78□□□□□ -0.52
LINC00272-201ENST00000367563 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
LINC00272-201ENST00000367563 POTEHQ6S545 545 aa11.77□□□□□ -0.53
LINC00272-201ENST00000367563 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
LINC00272-201ENST00000367563 HAX1O00165 279 aa11.76□□□□□ -0.53
LINC00272-201ENST00000367563 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
LINC00272-201ENST00000367563 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
LINC00272-201ENST00000367563 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
LINC00272-201ENST00000367563 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
LINC00272-201ENST00000367563 CANXP27824 592 aaKnown RBP11.76□□□□□ -0.53
LINC00272-201ENST00000367563 PPP2R1AP30153 589 aa11.76□□□□□ -0.53
LINC00272-201ENST00000367563 AKAP4Q5JQC9 854 aa11.76□□□□□ -0.53
LINC00272-201ENST00000367563 H0YIN7 160 aa11.75□□□□□ -0.53
LINC00272-201ENST00000367563 C21orf2O43822 256 aa11.75□□□□□ -0.53
LINC00272-201ENST00000367563 RALBP1Q15311 655 aa11.75□□□□□ -0.53
LINC00272-201ENST00000367563 MKRN1Q9UHC7 482 aaKnown RBP11.75□□□□□ -0.53
LINC00272-201ENST00000367563 SBF1O95248 1867 aa11.74□□□□□ -0.53
LINC00272-201ENST00000367563 HMOX1P09601 288 aa11.74□□□□□ -0.53
LINC00272-201ENST00000367563 TBC1D9BQ66K14 1250 aa11.74□□□□□ -0.53
LINC00272-201ENST00000367563 ZNF622Q969S3 477 aaKnown RBP eCLIP11.74□□□□□ -0.53
LINC00272-201ENST00000367563 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
LINC00272-201ENST00000367563 NUDCQ9Y266 331 aa11.74□□□□□ -0.53
LINC00272-201ENST00000367563 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
LINC00272-201ENST00000367563 MRC1P22897 1456 aa11.73□□□□□ -0.53
LINC00272-201ENST00000367563 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
LINC00272-201ENST00000367563 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
LINC00272-201ENST00000367563 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
LINC00272-201ENST00000367563 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
LINC00272-201ENST00000367563 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
LINC00272-201ENST00000367563 U2SURPO15042 1029 aaKnown RBP11.72□□□□□ -0.53
LINC00272-201ENST00000367563 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
LINC00272-201ENST00000367563 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
LINC00272-201ENST00000367563 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
LINC00272-201ENST00000367563 TIAM2Q8IVF5 1701 aa11.72□□□□□ -0.53
LINC00272-201ENST00000367563 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.53
LINC00272-201ENST00000367563 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.53
LINC00272-201ENST00000367563 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
LINC00272-201ENST00000367563 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
LINC00272-201ENST00000367563 TBC1D2BQ9UPU7 963 aa11.71□□□□□ -0.53
LINC00272-201ENST00000367563 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
LINC00272-201ENST00000367563 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
LINC00272-201ENST00000367563 SCN11AQ9UI33 1791 aa11.7□□□□□ -0.54
LINC00272-201ENST00000367563 FOXN1O15353 648 aa11.7□□□□□ -0.54
LINC00272-201ENST00000367563 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
LINC00272-201ENST00000367563 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
LINC00272-201ENST00000367563 PDE6BP35913 854 aa11.69□□□□□ -0.54
LINC00272-201ENST00000367563 ZNF496Q96IT1 587 aaPredicted RBP11.69□□□□□ -0.54
LINC00272-201ENST00000367563 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
LINC00272-201ENST00000367563 A0A087WZG4 1122 aa11.68□□□□□ -0.54
LINC00272-201ENST00000367563 STARD3NLO95772 234 aa11.68□□□□□ -0.54
LINC00272-201ENST00000367563 PHF12Q96QT6 1004 aa11.68□□□□□ -0.54
LINC00272-201ENST00000367563 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
LINC00272-201ENST00000367563 CNTNAP1P78357 1384 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 COL11A2P13942 1736 aaPredicted RBP11.67□□□□□ -0.54
LINC00272-201ENST00000367563 MAP3K13O43283 966 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 A1BGP04217 495 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 NEFMP07197 916 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 U2AF1L5P0DN76 240 aaPredicted RBP11.67□□□□□ -0.54
LINC00272-201ENST00000367563 U2AF1Q01081 240 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00272-201ENST00000367563 PRPF40BQ6NWY9 871 aaKnown RBP11.67□□□□□ -0.54
LINC00272-201ENST00000367563 TTC5Q8N0Z6 440 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
LINC00272-201ENST00000367563 ANKRD31Q8N7Z5 1873 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 CAMTA2O94983 1202 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 SRGNP10124 158 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
LINC00272-201ENST00000367563 VEGFBP49765 207 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 CNBD1Q8NA66 436 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 TAF1DQ9H5J8 278 aaPredicted RBP11.66□□□□□ -0.54
LINC00272-201ENST00000367563 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
LINC00272-201ENST00000367563 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
LINC00272-201ENST00000367563 ZNF541Q9H0D2 1346 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 KCNQ3O43525 872 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 PRKAR2BP31323 418 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 CLCN6P51797 869 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 ZNF790Q6PG37 636 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 CNKSR1Q969H4 720 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 SETDB2Q96T68 719 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 PNNQ9H307 717 aaKnown RBP11.65□□□□□ -0.54
LINC00272-201ENST00000367563 PDZRN3Q9UPQ7 1066 aa11.65□□□□□ -0.54
LINC00272-201ENST00000367563 NPHP1O15259 732 aa11.64□□□□□ -0.55
LINC00272-201ENST00000367563 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
LINC00272-201ENST00000367563 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
LINC00272-201ENST00000367563 EAPPQ56P03 285 aaPredicted RBP11.64□□□□□ -0.55
LINC00272-201ENST00000367563 LDHDQ86WU2 507 aa11.64□□□□□ -0.55
LINC00272-201ENST00000367563 C7orf43Q8WVR3 580 aa11.64□□□□□ -0.55
LINC00272-201ENST00000367563 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
LINC00272-201ENST00000367563 SCN7AQ01118 1682 aa11.63□□□□□ -0.55
LINC00272-201ENST00000367563 PRAMEF22A3QJZ6 481 aa11.63□□□□□ -0.55
LINC00272-201ENST00000367563 LBX1P52954 281 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms