RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 SRGNP10124 158 aa23.19■■□□□ 1.3
COL9A1-203ENST00000360859 ST5P78524 1137 aa23.19■■□□□ 1.3
COL9A1-203ENST00000360859 DCTN1Q14203 1278 aa23.19■■□□□ 1.3
COL9A1-203ENST00000360859 STYK1Q6J9G0 422 aa23.19■■□□□ 1.3
COL9A1-203ENST00000360859 CNKSR1Q969H4 720 aa23.19■■□□□ 1.3
COL9A1-203ENST00000360859 CLEC4GQ6UXB4 293 aa23.18■■□□□ 1.3
COL9A1-203ENST00000360859 JMYQ8N9B5 988 aa23.18■■□□□ 1.3
COL9A1-203ENST00000360859 LTBP3Q9NS15 1303 aa23.17■■□□□ 1.3
COL9A1-203ENST00000360859 POTECB2RU33 542 aa23.17■■□□□ 1.3
COL9A1-203ENST00000360859 ERFEQ4G0M1 354 aa23.17■■□□□ 1.3
COL9A1-203ENST00000360859 DPY19L2Q6NUT2 758 aa23.17■■□□□ 1.3
COL9A1-203ENST00000360859 FER1L6Q2WGJ9 1857 aa23.17■■□□□ 1.3
COL9A1-203ENST00000360859 HTATSF1O43719 755 aaKnown RBP23.16■■□□□ 1.3
COL9A1-203ENST00000360859 PRPF40BQ6NWY9 871 aaKnown RBP23.16■■□□□ 1.3
COL9A1-203ENST00000360859 NBPF5PQ86XG9 351 aaPredicted RBP23.16■■□□□ 1.3
COL9A1-203ENST00000360859 MASTLQ96GX5 879 aa23.16■■□□□ 1.3
COL9A1-203ENST00000360859 TAOK3Q9H2K8 898 aa23.16■■□□□ 1.3
COL9A1-203ENST00000360859 SLX4Q8IY92 1834 aa23.15■■□□□ 1.3
COL9A1-203ENST00000360859 NBPF26B4DH59 902 aa23.15■■□□□ 1.3
COL9A1-203ENST00000360859 NBPF10Q6P3W6 841 aaKnown RBP23.15■■□□□ 1.3
COL9A1-203ENST00000360859 NBPF15Q8N660 670 aa23.15■■□□□ 1.3
COL9A1-203ENST00000360859 ZNF652Q9Y2D9 606 aa23.15■■□□□ 1.3
COL9A1-203ENST00000360859 TAF7Q15545 349 aaPredicted RBP23.13■■□□□ 1.29
COL9A1-203ENST00000360859 SOGA3Q5TF21 947 aa23.13■■□□□ 1.29
COL9A1-203ENST00000360859 DICER1Q9UPY3 1922 aaKnown RBP23.13■■□□□ 1.29
COL9A1-203ENST00000360859 RGL2O15211 777 aa23.11■■□□□ 1.29
COL9A1-203ENST00000360859 C7orf43Q8WVR3 580 aa23.11■■□□□ 1.29
COL9A1-203ENST00000360859 MIS18AQ9NYP9 233 aa23.11■■□□□ 1.29
COL9A1-203ENST00000360859 NIP7Q9Y221 180 aaKnown RBP eCLIP23.11■■□□□ 1.29
COL9A1-203ENST00000360859 ARFGEF2Q9Y6D5 1785 aa23.11■■□□□ 1.29
COL9A1-203ENST00000360859 CACNA1SQ13698 1873 aa23.11■■□□□ 1.29
COL9A1-203ENST00000360859 TPTE2Q6XPS3 522 aa23.1■■□□□ 1.29
COL9A1-203ENST00000360859 KLRG2A4D1S0 409 aaPredicted RBP23.09■■□□□ 1.29
COL9A1-203ENST00000360859 NPR1P16066 1061 aa23.09■■□□□ 1.29
COL9A1-203ENST00000360859 DDNO94850 711 aaPredicted RBP23.08■■□□□ 1.29
COL9A1-203ENST00000360859 FAM177BA6PVY3 158 aa23.07■■□□□ 1.28
COL9A1-203ENST00000360859 HLFQ16534 295 aa23.07■■□□□ 1.28
COL9A1-203ENST00000360859 CCDC93Q567U6 631 aa23.06■■□□□ 1.28
COL9A1-203ENST00000360859 NEFMP07197 916 aa23.05■■□□□ 1.28
COL9A1-203ENST00000360859 COL13A1Q5TAT6 717 aaPredicted RBP23.05■■□□□ 1.28
COL9A1-203ENST00000360859 CHADLQ6NUI6 762 aa23.04■■□□□ 1.28
COL9A1-203ENST00000360859 PNISRQ8TF01 805 aaKnown RBP23.04■■□□□ 1.28
COL9A1-203ENST00000360859 PLEKHF1Q96S99 279 aa23.04■■□□□ 1.28
COL9A1-203ENST00000360859 LAMB4A4D0S4 1761 aa23.04■■□□□ 1.28
COL9A1-203ENST00000360859 POTEIP0CG38 1075 aa23.03■■□□□ 1.28
COL9A1-203ENST00000360859 POTEJP0CG39 1038 aa23.03■■□□□ 1.28
COL9A1-203ENST00000360859 FKBP4Q02790 459 aaKnown RBP eCLIP23.03■■□□□ 1.28
COL9A1-203ENST00000360859 OLFM4Q6UX06 510 aa23.03■■□□□ 1.28
COL9A1-203ENST00000360859 NGEFQ8N5V2 710 aa23.03■■□□□ 1.28
COL9A1-203ENST00000360859 GTF2E1P29083 439 aaPredicted RBP23.02■■□□□ 1.28
COL9A1-203ENST00000360859 ZNF277Q9NRM2 450 aaPredicted RBP23.02■■□□□ 1.28
COL9A1-203ENST00000360859 DLG5Q8TDM6 1919 aa23.02■■□□□ 1.28
COL9A1-203ENST00000360859 KDM3BQ7LBC6 1761 aa23.01■■□□□ 1.27
COL9A1-203ENST00000360859 ERVV-1B6SEH8 477 aa23.01■■□□□ 1.27
COL9A1-203ENST00000360859 EIF4A1P60842 406 aaKnown RBP23.01■■□□□ 1.27
COL9A1-203ENST00000360859 NFE2L2Q16236 605 aa23.01■■□□□ 1.27
COL9A1-203ENST00000360859 L3MBTL3Q96JM7 780 aaPredicted RBP23.01■■□□□ 1.27
COL9A1-203ENST00000360859 THUMPD2Q9BTF0 503 aaKnown RBP23.01■■□□□ 1.27
COL9A1-203ENST00000360859 IQCA1LA6NCM1 817 aa23■■□□□ 1.27
COL9A1-203ENST00000360859 RTKN2Q8IZC4 609 aa23■■□□□ 1.27
COL9A1-203ENST00000360859 RRP7AQ9Y3A4 280 aaKnown RBP23■■□□□ 1.27
COL9A1-203ENST00000360859 MAP3K15Q6ZN16 1313 aa23■■□□□ 1.27
COL9A1-203ENST00000360859 PCNTO95613 3336 aa22.99■■□□□ 1.27
COL9A1-203ENST00000360859 ALDH1B1P30837 517 aa22.99■■□□□ 1.27
COL9A1-203ENST00000360859 NYXQ9GZU5 481 aa22.99■■□□□ 1.27
COL9A1-203ENST00000360859 ABCC12Q96J65 1359 aa22.99■■□□□ 1.27
COL9A1-203ENST00000360859 CRY2Q49AN0 593 aa22.98■■□□□ 1.27
COL9A1-203ENST00000360859 TTLL7Q6ZT98 887 aa22.98■■□□□ 1.27
COL9A1-203ENST00000360859 NUTM1Q86Y26 1132 aa22.98■■□□□ 1.27
COL9A1-203ENST00000360859 TAF1DQ9H5J8 278 aaPredicted RBP22.98■■□□□ 1.27
COL9A1-203ENST00000360859 CREBZFQ9NS37 354 aa22.98■■□□□ 1.27
COL9A1-203ENST00000360859 ZNF541Q9H0D2 1346 aa22.98■■□□□ 1.27
COL9A1-203ENST00000360859 HSPA1AP0DMV8 641 aaKnown RBP22.97■■□□□ 1.27
COL9A1-203ENST00000360859 HSPA1BP0DMV9 641 aaKnown RBP22.97■■□□□ 1.27
COL9A1-203ENST00000360859 MYL6BP14649 208 aa22.97■■□□□ 1.27
COL9A1-203ENST00000360859 KIF6Q6ZMV9 814 aa22.97■■□□□ 1.27
COL9A1-203ENST00000360859 LDHDQ86WU2 507 aa22.96■■□□□ 1.27
COL9A1-203ENST00000360859 SYNE4Q8N205 404 aa22.96■■□□□ 1.27
COL9A1-203ENST00000360859 SCN4AP35499 1836 aa22.95■■□□□ 1.26
COL9A1-203ENST00000360859 IARSP41252 1262 aaKnown RBP22.95■■□□□ 1.26
COL9A1-203ENST00000360859 NUP98P52948 1817 aa22.95■■□□□ 1.26
COL9A1-203ENST00000360859 PNNQ9H307 717 aaKnown RBP22.95■■□□□ 1.26
COL9A1-203ENST00000360859 ZBTB3Q9H5J0 574 aa22.95■■□□□ 1.26
COL9A1-203ENST00000360859 MAPK8IP3Q9UPT6 1336 aa22.95■■□□□ 1.26
COL9A1-203ENST00000360859 SNED1Q8TER0 1413 aa22.94■■□□□ 1.26
COL9A1-203ENST00000360859 UBN2Q6ZU65 1347 aa22.94■■□□□ 1.26
COL9A1-203ENST00000360859 GPTP24298 496 aa22.94■■□□□ 1.26
COL9A1-203ENST00000360859 FZD9O00144 591 aa22.93■■□□□ 1.26
COL9A1-203ENST00000360859 SUSD4Q5VX71 490 aa22.93■■□□□ 1.26
COL9A1-203ENST00000360859 MKRN1Q9UHC7 482 aaKnown RBP22.93■■□□□ 1.26
COL9A1-203ENST00000360859 IBTKQ9P2D0 1353 aaPredicted RBP22.92■■□□□ 1.26
COL9A1-203ENST00000360859 PASKQ96RG2 1323 aa22.92■■□□□ 1.26
COL9A1-203ENST00000360859 HOXA10P31260 410 aaPredicted RBP22.92■■□□□ 1.26
COL9A1-203ENST00000360859 TNS4Q8IZW8 715 aa22.92■■□□□ 1.26
COL9A1-203ENST00000360859 RPGRQ92834 1020 aaKnown RBP22.92■■□□□ 1.26
COL9A1-203ENST00000360859 PSMD1Q99460 953 aa22.92■■□□□ 1.26
COL9A1-203ENST00000360859 HACL1Q9UJ83 578 aa22.92■■□□□ 1.26
COL9A1-203ENST00000360859 RIC1Q4ADV7 1423 aa22.91■■□□□ 1.26
COL9A1-203ENST00000360859 ERBB4Q15303 1308 aa22.91■■□□□ 1.26
COL9A1-203ENST00000360859 EAPPQ56P03 285 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms