RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CABP4P57796 275 aa15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 STARD3NLO95772 234 aa15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 LRP2BPQ9P2M1 347 aa15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 CCDC96Q2M329 555 aa15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 TBC1D2Q9BYX2 928 aa15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 DDX19AQ9NUU7 478 aaKnown RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 VIMP08670 466 aaKnown RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 APBB1IPQ7Z5R6 666 aaPredicted RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 SUDS3Q9H7L9 328 aaPredicted RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 NLRP6P59044 892 aa15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 RGS22Q8NE09 1264 aa15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 RNF41Q9H4P4 317 aaPredicted RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 UTP14AQ9BVJ6 771 aaKnown RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 RBM28Q9NW13 759 aaKnown RBP15.12■□□□□ 0.01
SRGAP3-201ENST00000360413 KANK3Q6NY19 840 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 CLNS1AP54105 237 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 SIL1Q9H173 461 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 ZEB2O60315 1214 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 AIDAQ96BJ3 306 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 PTPRGP23470 1445 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 ZNF165P49910 485 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 CNNM3Q8NE01 707 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 CEP126Q9P2H0 1117 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 TTC14Q96N46 770 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 SMC6Q96SB8 1091 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 IQCGQ9H095 443 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 NOP2P46087 812 aaKnown RBP15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 GOLGA1Q92805 767 aa15.11■□□□□ 0.01
SRGAP3-201ENST00000360413 ANAPC4Q9UJX5 808 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 CTAGE15A4D2H0 777 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 B4DLN1 442 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 CTAGE8P0CG41 777 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 MRPL12P52815 198 aaKnown RBP15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 CTAGE6Q86UF2 777 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 IQCA1Q86XH1 822 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 CTAGE4Q8IX94 777 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 STIM2Q9P246 746 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 ODF2LQ9ULJ1 636 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 DAPK1P53355 1430 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 CWC25Q9NXE8 425 aaPredicted RBP15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 PLEKHH2Q8IVE3 1493 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 CEP120Q8N960 986 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 HDGFL1Q5TGJ6 251 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 PRPF31Q8WWY3 499 aaKnown RBP15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 TSR2Q969E8 191 aaKnown RBP15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 FEZ2Q9UHY8 353 aaPredicted RBP15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
SRGAP3-201ENST00000360413 ZBTB16Q05516 673 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 ATP2A1O14983 1001 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 CPLX4Q7Z7G2 160 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 AACSQ86V21 672 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 CTCFLQ8NI51 663 aaPredicted RBP15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 CTAGE9A4FU28 777 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 KLHL40Q2TBA0 621 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 DZIP1Q86YF9 867 aaKnown RBP15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 LACTBP83111 547 aaPredicted RBP15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 BIN1O00499 593 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 KIAA0753Q2KHM9 967 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 CCDC110Q8TBZ0 833 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 SH2B1Q9NRF2 756 aaPredicted RBP15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 RASAL2Q9UJF2 1139 aa15.09■□□□□ 0.01
SRGAP3-201ENST00000360413 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0.01
SRGAP3-201ENST00000360413 UBE2HP62256 183 aa15.08■□□□□ 0.01
SRGAP3-201ENST00000360413 ATP11AP98196 1134 aa15.08■□□□□ 0.01
SRGAP3-201ENST00000360413 FSIP1Q8NA03 581 aa15.08■□□□□ 0.01
SRGAP3-201ENST00000360413 JAKMIP2Q96AA8 810 aa15.08■□□□□ 0.01
SRGAP3-201ENST00000360413 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0.01
SRGAP3-201ENST00000360413 SKILP12757 684 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 MTHFSP49914 203 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 CCDC129Q6ZRS4 1044 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 TBC1D5Q92609 795 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 HCLS1P14317 486 aaPredicted RBP15.08■□□□□ 0
SRGAP3-201ENST00000360413 FKBP4Q02790 459 aaKnown RBP eCLIP15.08■□□□□ 0
SRGAP3-201ENST00000360413 HAUS2Q9NVX0 235 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 POGZQ7Z3K3 1410 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 GMNNO75496 209 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 PIP4K2BP78356 416 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 CFAP58Q5T655 872 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 CEP128Q6ZU80 1094 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 CALML4Q96GE6 196 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 FAM184BQ9ULE4 1060 aa15.08■□□□□ 0
SRGAP3-201ENST00000360413 SLC4A2P04920 1241 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 SNX16P57768 344 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 JPH4Q96JJ6 628 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 BUB1BO60566 1050 aaPredicted RBP15.07■□□□□ 0
SRGAP3-201ENST00000360413 RAB11FIP3O75154 756 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 MAP7D1Q3KQU3 841 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 CCDC174Q6PII3 467 aa15.07■□□□□ 0
SRGAP3-201ENST00000360413 RNF168Q8IYW5 571 aaPredicted RBP15.07■□□□□ 0
SRGAP3-201ENST00000360413 GTF3C6Q969F1 213 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms