RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 ARID5BQ14865 1188 aa8.94□□□□□ -0.98
APP-206ENST00000359726 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
APP-206ENST00000359726 REXO1L1PQ8IX06 675 aa8.94□□□□□ -0.98
APP-206ENST00000359726 AFAP1Q8N556 730 aa8.94□□□□□ -0.98
APP-206ENST00000359726 IQUBQ8NA54 791 aa8.94□□□□□ -0.98
APP-206ENST00000359726 LCMT1Q9UIC8 334 aa8.94□□□□□ -0.98
APP-206ENST00000359726 EXOC6BQ9Y2D4 811 aa8.94□□□□□ -0.98
APP-206ENST00000359726 ARHGEF10O15013 1369 aa8.94□□□□□ -0.98
APP-206ENST00000359726 CRB1P82279 1406 aa8.94□□□□□ -0.98
APP-206ENST00000359726 ERICH4A6NGS2 130 aa8.93□□□□□ -0.98
APP-206ENST00000359726 MED1Q15648 1581 aaPredicted RBP8.93□□□□□ -0.98
APP-206ENST00000359726 RIMS1Q86UR5 1692 aaKnown RBP8.93□□□□□ -0.98
APP-206ENST00000359726 CCAR2Q8N163 923 aaKnown RBP8.93□□□□□ -0.98
APP-206ENST00000359726 NOL10Q9BSC4 688 aaKnown RBP8.93□□□□□ -0.98
APP-206ENST00000359726 EFCAB2Q5VUJ9 269 aa8.93□□□□□ -0.98
APP-206ENST00000359726 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
APP-206ENST00000359726 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
APP-206ENST00000359726 DDX60Q8IY21 1712 aaKnown RBP8.93□□□□□ -0.98
APP-206ENST00000359726 CDK11BP21127 795 aaKnown RBP8.93□□□□□ -0.98
APP-206ENST00000359726 ANO6Q4KMQ2 910 aa8.93□□□□□ -0.98
APP-206ENST00000359726 TSHZ3Q63HK5 1081 aa8.93□□□□□ -0.98
APP-206ENST00000359726 ZFP91Q96JP5 570 aaPredicted RBP8.93□□□□□ -0.98
APP-206ENST00000359726 NBPF11Q86T75 865 aa8.92□□□□□ -0.98
APP-206ENST00000359726 SIRT1Q96EB6 747 aa8.92□□□□□ -0.98
APP-206ENST00000359726 PRAM1Q96QH2 718 aa8.92□□□□□ -0.98
APP-206ENST00000359726 SPATA31D1Q6ZQQ2 1576 aa8.92□□□□□ -0.98
APP-206ENST00000359726 PXDNLA1KZ92 1463 aa8.92□□□□□ -0.98
APP-206ENST00000359726 FIBPO43427 364 aa8.92□□□□□ -0.98
APP-206ENST00000359726 SLU7O95391 586 aaKnown RBP8.92□□□□□ -0.98
APP-206ENST00000359726 CLSTN2Q9H4D0 955 aa8.92□□□□□ -0.98
APP-206ENST00000359726 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.92□□□□□ -0.98
APP-206ENST00000359726 V9GYY5 206 aaPredicted RBP8.92□□□□□ -0.98
APP-206ENST00000359726 DHX16O60231 1041 aaKnown RBP8.92□□□□□ -0.98
APP-206ENST00000359726 ST5P78524 1137 aa8.92□□□□□ -0.98
APP-206ENST00000359726 BMS1Q14692 1282 aaKnown RBP8.92□□□□□ -0.98
APP-206ENST00000359726 MAP3K11Q16584 847 aa8.92□□□□□ -0.98
APP-206ENST00000359726 RNF20Q5VTR2 975 aa8.92□□□□□ -0.98
APP-206ENST00000359726 PLEKHG2Q9H7P9 1386 aa8.91□□□□□ -0.98
APP-206ENST00000359726 SASH3O75995 380 aa8.91□□□□□ -0.98
APP-206ENST00000359726 KCNJ6P48051 423 aa8.91□□□□□ -0.98
APP-206ENST00000359726 E4F1Q66K89 784 aaPredicted RBP8.91□□□□□ -0.98
APP-206ENST00000359726 PI4K2BQ8TCG2 481 aa8.91□□□□□ -0.98
APP-206ENST00000359726 LIMCH1Q9UPQ0 1083 aa8.91□□□□□ -0.98
APP-206ENST00000359726 CHL1O00533 1208 aa8.91□□□□□ -0.98
APP-206ENST00000359726 SGSM2O43147 1006 aa8.91□□□□□ -0.98
APP-206ENST00000359726 TPD52L1Q16890 204 aaPredicted RBP8.91□□□□□ -0.98
APP-206ENST00000359726 SYT10Q6XYQ8 523 aa8.91□□□□□ -0.98
APP-206ENST00000359726 NOL8Q76FK4 1167 aaKnown RBP8.91□□□□□ -0.98
APP-206ENST00000359726 CERS3Q8IU89 383 aa8.91□□□□□ -0.98
APP-206ENST00000359726 SMARCE1Q969G3 411 aa8.91□□□□□ -0.98
APP-206ENST00000359726 ELL2O00472 640 aaPredicted RBP8.9□□□□□ -0.98
APP-206ENST00000359726 NEMFO60524 1076 aa8.9□□□□□ -0.98
APP-206ENST00000359726 MCCP23508 829 aa8.9□□□□□ -0.98
APP-206ENST00000359726 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
APP-206ENST00000359726 CLIP2Q9UDT6 1046 aa8.9□□□□□ -0.98
APP-206ENST00000359726 CEP170BQ9Y4F5 1589 aaPredicted RBP8.9□□□□□ -0.98
APP-206ENST00000359726 ERCC6LQ2NKX8 1250 aa8.9□□□□□ -0.98
APP-206ENST00000359726 DHX40Q8IX18 779 aaKnown RBP8.9□□□□□ -0.98
APP-206ENST00000359726 RTF1Q92541 710 aaKnown RBP8.9□□□□□ -0.98
APP-206ENST00000359726 OSBPL5Q9H0X9 879 aaPredicted RBP8.9□□□□□ -0.98
APP-206ENST00000359726 PSD3Q9NYI0 1048 aa8.9□□□□□ -0.98
APP-206ENST00000359726 FAM83GA6ND36 823 aa8.9□□□□□ -0.99
APP-206ENST00000359726 TBC1D8O95759 1140 aa8.9□□□□□ -0.99
APP-206ENST00000359726 GNAI3P08754 354 aa8.9□□□□□ -0.99
APP-206ENST00000359726 GJB2P29033 226 aa8.9□□□□□ -0.99
APP-206ENST00000359726 SRPK2P78362 688 aaKnown RBP8.9□□□□□ -0.99
APP-206ENST00000359726 GTF3C6Q969F1 213 aa8.9□□□□□ -0.99
APP-206ENST00000359726 PGBD1Q96JS3 809 aa8.9□□□□□ -0.99
APP-206ENST00000359726 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.99
APP-206ENST00000359726 NUP62CLQ9H1M0 184 aa8.9□□□□□ -0.99
APP-206ENST00000359726 ORC3Q9UBD5 711 aaPredicted RBP8.9□□□□□ -0.99
APP-206ENST00000359726 CPS1P31327 1500 aa8.89□□□□□ -0.99
APP-206ENST00000359726 ALKQ9UM73 1620 aa8.89□□□□□ -0.99
APP-206ENST00000359726 ATP8B1O43520 1251 aa8.89□□□□□ -0.99
APP-206ENST00000359726 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
APP-206ENST00000359726 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
APP-206ENST00000359726 NEK11Q8NG66 645 aa8.89□□□□□ -0.99
APP-206ENST00000359726 ANO2Q9NQ90 1003 aa8.89□□□□□ -0.99
APP-206ENST00000359726 ATP6V1DQ9Y5K8 247 aa8.89□□□□□ -0.99
APP-206ENST00000359726 USP42Q9H9J4 1324 aaKnown RBP8.89□□□□□ -0.99
APP-206ENST00000359726 MYO1CO00159 1063 aa8.89□□□□□ -0.99
APP-206ENST00000359726 TRIM66O15016 1216 aa8.89□□□□□ -0.99
APP-206ENST00000359726 MAPK8IP2Q13387 824 aaPredicted RBP8.89□□□□□ -0.99
APP-206ENST00000359726 PTPN14Q15678 1187 aa8.89□□□□□ -0.99
APP-206ENST00000359726 JCADQ9P266 1359 aa8.89□□□□□ -0.99
APP-206ENST00000359726 TOPAZ1Q8N9V7 1692 aa8.89□□□□□ -0.99
APP-206ENST00000359726 SRLQ86TD4 932 aa8.88□□□□□ -0.99
APP-206ENST00000359726 SECISBP2LQ93073 1101 aaKnown RBP8.88□□□□□ -0.99
APP-206ENST00000359726 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
APP-206ENST00000359726 RSPH14Q9UHP6 348 aa8.88□□□□□ -0.99
APP-206ENST00000359726 NEDD4P46934 1319 aa8.88□□□□□ -0.99
APP-206ENST00000359726 PNMA6EA0A0J9YXQ4 647 aa8.88□□□□□ -0.99
APP-206ENST00000359726 VPS53Q5VIR6 699 aa8.88□□□□□ -0.99
APP-206ENST00000359726 TRIM65Q6PJ69 517 aa8.88□□□□□ -0.99
APP-206ENST00000359726 C11orf57Q6ZUT1 292 aaPredicted RBP8.88□□□□□ -0.99
APP-206ENST00000359726 TXLNBQ8N3L3 684 aa8.88□□□□□ -0.99
APP-206ENST00000359726 SLC52A1Q9NWF4 448 aa8.88□□□□□ -0.99
APP-206ENST00000359726 POGZQ7Z3K3 1410 aa8.88□□□□□ -0.99
APP-206ENST00000359726 NR1I2O75469 434 aa8.88□□□□□ -0.99
APP-206ENST00000359726 RPS6KA5O75582 802 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms