RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 BTAF1O14981 1849 aa17.49■□□□□ 0.39
PDLIM5-203ENST00000359265 DDX21Q9NR30 783 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDLIM5-203ENST00000359265 HYPKQ9NX55 129 aa17.49■□□□□ 0.39
PDLIM5-203ENST00000359265 CICQ96RK0 1608 aaPredicted RBP17.49■□□□□ 0.39
PDLIM5-203ENST00000359265 TJP1Q07157 1748 aa17.49■□□□□ 0.39
PDLIM5-203ENST00000359265 COL24A1Q17RW2 1714 aa17.49■□□□□ 0.39
PDLIM5-203ENST00000359265 PRAMEF22A3QJZ6 481 aa17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 KIF3CO14782 793 aa17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 CCT4P50991 539 aaKnown RBP17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 CENPQQ7L2Z9 268 aaPredicted RBP17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 SMARCC1Q92922 1105 aaPredicted RBP17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 ADCY9O60503 1353 aa17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
PDLIM5-203ENST00000359265 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
PDLIM5-203ENST00000359265 APLP1P51693 650 aa17.47■□□□□ 0.39
PDLIM5-203ENST00000359265 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
PDLIM5-203ENST00000359265 PHAXQ9H814 394 aaKnown RBP17.47■□□□□ 0.39
PDLIM5-203ENST00000359265 ATG3Q9NT62 314 aa17.47■□□□□ 0.39
PDLIM5-203ENST00000359265 KDM2BQ8NHM5 1336 aa17.47■□□□□ 0.39
PDLIM5-203ENST00000359265 ZNF831Q5JPB2 1677 aa17.46■□□□□ 0.39
PDLIM5-203ENST00000359265 F6X3S4 739 aa17.46■□□□□ 0.39
PDLIM5-203ENST00000359265 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
PDLIM5-203ENST00000359265 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
PDLIM5-203ENST00000359265 RNF216Q9NWF9 866 aaPredicted RBP17.46■□□□□ 0.39
PDLIM5-203ENST00000359265 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
PDLIM5-203ENST00000359265 AFDNP55196 1824 aaKnown RBP17.46■□□□□ 0.39
PDLIM5-203ENST00000359265 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
PDLIM5-203ENST00000359265 ANXA1P04083 346 aa17.45■□□□□ 0.38
PDLIM5-203ENST00000359265 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
PDLIM5-203ENST00000359265 TNS4Q8IZW8 715 aa17.45■□□□□ 0.38
PDLIM5-203ENST00000359265 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
PDLIM5-203ENST00000359265 PTCD1O75127 700 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-203ENST00000359265 DDX58O95786 925 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-203ENST00000359265 POLD1P28340 1107 aa17.44■□□□□ 0.38
PDLIM5-203ENST00000359265 PCDHB15Q9Y5E8 787 aa17.44■□□□□ 0.38
PDLIM5-203ENST00000359265 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
PDLIM5-203ENST00000359265 PALLDQ8WX93 1383 aa17.43■□□□□ 0.38
PDLIM5-203ENST00000359265 PDIA6Q15084 440 aa17.43■□□□□ 0.38
PDLIM5-203ENST00000359265 PROSER3Q2NL68 480 aa17.43■□□□□ 0.38
PDLIM5-203ENST00000359265 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
PDLIM5-203ENST00000359265 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
PDLIM5-203ENST00000359265 LY75O60449 1722 aa17.42■□□□□ 0.38
PDLIM5-203ENST00000359265 SLC16A10Q8TF71 515 aa17.42■□□□□ 0.38
PDLIM5-203ENST00000359265 DNAAF4Q8WXU2 420 aa17.42■□□□□ 0.38
PDLIM5-203ENST00000359265 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
PDLIM5-203ENST00000359265 KSR2Q6VAB6 950 aa17.41■□□□□ 0.38
PDLIM5-203ENST00000359265 PNPLA7Q6ZV29 1317 aa17.41■□□□□ 0.38
PDLIM5-203ENST00000359265 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
PDLIM5-203ENST00000359265 STARD3NLO95772 234 aa17.4■□□□□ 0.38
PDLIM5-203ENST00000359265 MYL6BP14649 208 aa17.4■□□□□ 0.38
PDLIM5-203ENST00000359265 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
PDLIM5-203ENST00000359265 HTRA3P83110 453 aa17.39■□□□□ 0.37
PDLIM5-203ENST00000359265 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
PDLIM5-203ENST00000359265 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
PDLIM5-203ENST00000359265 SRCIN1Q9C0H9 1055 aa17.39■□□□□ 0.37
PDLIM5-203ENST00000359265 LOC102724428A0A0B4J2F2 783 aa17.38■□□□□ 0.37
PDLIM5-203ENST00000359265 IGHDP01880 384 aa17.38■□□□□ 0.37
PDLIM5-203ENST00000359265 SIK1P57059 783 aa17.38■□□□□ 0.37
PDLIM5-203ENST00000359265 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
PDLIM5-203ENST00000359265 MEIS3Q99687 375 aa17.38■□□□□ 0.37
PDLIM5-203ENST00000359265 MAP3K2Q9Y2U5 619 aa17.38■□□□□ 0.37
PDLIM5-203ENST00000359265 GNAI3P08754 354 aa17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 ATP6V1AP38606 617 aa17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 AIMP1Q12904 312 aaKnown RBP17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 LRP10Q7Z4F1 713 aa17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 DNAJC10Q8IXB1 793 aa17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 JMYQ8N9B5 988 aa17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 ANKRD36CQ5JPF3 1778 aa17.37■□□□□ 0.37
PDLIM5-203ENST00000359265 TUBGCP6Q96RT7 1819 aa17.36■□□□□ 0.37
PDLIM5-203ENST00000359265 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
PDLIM5-203ENST00000359265 HMGB2P26583 209 aaKnown RBP17.36■□□□□ 0.37
PDLIM5-203ENST00000359265 COPS6Q7L5N1 327 aa17.36■□□□□ 0.37
PDLIM5-203ENST00000359265 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
PDLIM5-203ENST00000359265 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 PIP4K2AP48426 406 aaPredicted RBP17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 BEND3Q5T5X7 828 aa17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 IBTKQ9P2D0 1353 aaPredicted RBP17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
PDLIM5-203ENST00000359265 A1BGP04217 495 aa17.34■□□□□ 0.37
PDLIM5-203ENST00000359265 NEXNQ0ZGT2 675 aa17.34■□□□□ 0.37
PDLIM5-203ENST00000359265 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
PDLIM5-203ENST00000359265 GNAI2P04899 355 aa17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 UBTFL1P0CB47 393 aaPredicted RBP17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 CYP19A1P11511 503 aaPredicted RBP17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 KCNQ4P56696 695 aa17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 RPAP2Q8IXW5 612 aaPredicted RBP17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 LINS1Q8NG48 757 aa17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 WDR90Q96KV7 1748 aa17.33■□□□□ 0.36
PDLIM5-203ENST00000359265 MYH14Q7Z406 1995 aaKnown RBP17.32■□□□□ 0.36
PDLIM5-203ENST00000359265 ANKRD44Q8N8A2 993 aa17.32■□□□□ 0.36
PDLIM5-203ENST00000359265 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
PDLIM5-203ENST00000359265 CCNL1Q9UK58 526 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms