RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 STARD3NLO95772 234 aa16.84■□□□□ 0.29
CCDC197-201ENST00000359253 PROSER3Q2NL68 480 aa16.84■□□□□ 0.29
CCDC197-201ENST00000359253 RIC3Q7Z5B4 369 aa16.84■□□□□ 0.29
CCDC197-201ENST00000359253 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
CCDC197-201ENST00000359253 USP44Q9H0E7 712 aa16.84■□□□□ 0.29
CCDC197-201ENST00000359253 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
CCDC197-201ENST00000359253 PALLDQ8WX93 1383 aa16.84■□□□□ 0.29
CCDC197-201ENST00000359253 LOC102724428A0A0B4J2F2 783 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 ITGB4P16144 1822 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 SIK1P57059 783 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 ATP8B2P98198 1209 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 LRP10Q7Z4F1 713 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 CHD1LQ86WJ1 897 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 C1orf115Q9H7X2 142 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 LRRC4BQ9NT99 713 aa16.83■□□□□ 0.28
CCDC197-201ENST00000359253 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
CCDC197-201ENST00000359253 ANXA1P04083 346 aa16.82■□□□□ 0.28
CCDC197-201ENST00000359253 PDE4AP27815 886 aa16.82■□□□□ 0.28
CCDC197-201ENST00000359253 RGS3P49796 1198 aa16.82■□□□□ 0.28
CCDC197-201ENST00000359253 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
CCDC197-201ENST00000359253 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
CCDC197-201ENST00000359253 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
CCDC197-201ENST00000359253 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
CCDC197-201ENST00000359253 BACH2Q9BYV9 841 aa16.82■□□□□ 0.28
CCDC197-201ENST00000359253 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
CCDC197-201ENST00000359253 UTYO14607 1347 aa16.81■□□□□ 0.28
CCDC197-201ENST00000359253 PTCD1O75127 700 aaKnown RBP16.81■□□□□ 0.28
CCDC197-201ENST00000359253 MYL6BP14649 208 aa16.81■□□□□ 0.28
CCDC197-201ENST00000359253 PLBD2Q8NHP8 589 aa16.81■□□□□ 0.28
CCDC197-201ENST00000359253 STK32BQ9NY57 414 aa16.81■□□□□ 0.28
CCDC197-201ENST00000359253 ATP6V1AP38606 617 aa16.8■□□□□ 0.28
CCDC197-201ENST00000359253 SLC15A2Q16348 729 aa16.8■□□□□ 0.28
CCDC197-201ENST00000359253 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
CCDC197-201ENST00000359253 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
CCDC197-201ENST00000359253 C9orf78Q9NZ63 289 aaPredicted RBP16.79■□□□□ 0.28
CCDC197-201ENST00000359253 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
CCDC197-201ENST00000359253 ANKRD45Q5TZF3 282 aa16.78■□□□□ 0.28
CCDC197-201ENST00000359253 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
CCDC197-201ENST00000359253 LY75O60449 1722 aa16.78■□□□□ 0.28
CCDC197-201ENST00000359253 RREB1Q92766 1687 aa16.78■□□□□ 0.28
CCDC197-201ENST00000359253 NBPF26B4DH59 902 aa16.77■□□□□ 0.28
CCDC197-201ENST00000359253 GRM8O00222 908 aa16.77■□□□□ 0.28
CCDC197-201ENST00000359253 MTX1Q13505 466 aa16.77■□□□□ 0.28
CCDC197-201ENST00000359253 NBPF10Q6P3W6 841 aaKnown RBP16.77■□□□□ 0.28
CCDC197-201ENST00000359253 NBPF15Q8N660 670 aa16.77■□□□□ 0.28
CCDC197-201ENST00000359253 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.28
CCDC197-201ENST00000359253 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
CCDC197-201ENST00000359253 LRRFIP2Q9Y608 721 aaKnown RBP16.77■□□□□ 0.28
CCDC197-201ENST00000359253 COL15A1P39059 1388 aa16.77■□□□□ 0.27
CCDC197-201ENST00000359253 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
CCDC197-201ENST00000359253 NEURL1BA8MQ27 555 aa16.75■□□□□ 0.27
CCDC197-201ENST00000359253 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
CCDC197-201ENST00000359253 RAB11FIP3O75154 756 aa16.75■□□□□ 0.27
CCDC197-201ENST00000359253 A1BGP04217 495 aa16.75■□□□□ 0.27
CCDC197-201ENST00000359253 R3HDM1Q15032 1099 aaKnown RBP16.75■□□□□ 0.27
CCDC197-201ENST00000359253 DNAJC10Q8IXB1 793 aa16.75■□□□□ 0.27
CCDC197-201ENST00000359253 SLC4A9Q96Q91 983 aa16.75■□□□□ 0.27
CCDC197-201ENST00000359253 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
CCDC197-201ENST00000359253 NBPF7P0C2Y1 421 aaPredicted RBP16.74■□□□□ 0.27
CCDC197-201ENST00000359253 POLA2Q14181 598 aa16.74■□□□□ 0.27
CCDC197-201ENST00000359253 GCKRQ14397 625 aa16.74■□□□□ 0.27
CCDC197-201ENST00000359253 MYD88Q99836 296 aa16.74■□□□□ 0.27
CCDC197-201ENST00000359253 LNPKQ9C0E8 428 aa16.74■□□□□ 0.27
CCDC197-201ENST00000359253 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
CCDC197-201ENST00000359253 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
CCDC197-201ENST00000359253 IGKV5-2P06315 115 aa16.73■□□□□ 0.27
CCDC197-201ENST00000359253 CYP19A1P11511 503 aaPredicted RBP16.73■□□□□ 0.27
CCDC197-201ENST00000359253 KCNQ4P56696 695 aa16.73■□□□□ 0.27
CCDC197-201ENST00000359253 ITPK1Q13572 414 aa16.73■□□□□ 0.27
CCDC197-201ENST00000359253 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
CCDC197-201ENST00000359253 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
CCDC197-201ENST00000359253 SLC16A10Q8TF71 515 aa16.73■□□□□ 0.27
CCDC197-201ENST00000359253 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
CCDC197-201ENST00000359253 IL6STP40189 918 aaPredicted RBP16.72■□□□□ 0.27
CCDC197-201ENST00000359253 TRIM28Q13263 835 aaKnown RBP16.72■□□□□ 0.27
CCDC197-201ENST00000359253 CWF19L2Q2TBE0 894 aaKnown RBP16.72■□□□□ 0.27
CCDC197-201ENST00000359253 HSP90AB3PQ58FF7 597 aa16.72■□□□□ 0.27
CCDC197-201ENST00000359253 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
CCDC197-201ENST00000359253 CCDC191Q8NCU4 936 aa16.72■□□□□ 0.27
CCDC197-201ENST00000359253 NUP188Q5SRE5 1749 aa16.72■□□□□ 0.27
CCDC197-201ENST00000359253 CNTNAP4Q9C0A0 1308 aa16.71■□□□□ 0.27
CCDC197-201ENST00000359253 C8orf34Q49A92 452 aa16.71■□□□□ 0.27
CCDC197-201ENST00000359253 PPP1R42Q7Z4L9 355 aa16.71■□□□□ 0.27
CCDC197-201ENST00000359253 LINC00116Q8NCU8 138 aa16.71■□□□□ 0.27
CCDC197-201ENST00000359253 AK7Q96M32 723 aa16.71■□□□□ 0.27
CCDC197-201ENST00000359253 ARFGEF2Q9Y6D5 1785 aa16.71■□□□□ 0.27
CCDC197-201ENST00000359253 PNMA6EA0A0J9YXQ4 647 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 RPS6KA4O75676 772 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 ADRA2BP18089 450 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 SSFA2P28290 1259 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 LRRCC1Q9C099 1032 aa16.7■□□□□ 0.26
CCDC197-201ENST00000359253 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
CCDC197-201ENST00000359253 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
CCDC197-201ENST00000359253 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
CCDC197-201ENST00000359253 ERVV-1B6SEH8 477 aa16.69■□□□□ 0.26
CCDC197-201ENST00000359253 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms